mRNA_M-pyrifera_M_contig110892.2286.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A6U1X8U5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A6U1X8U5_9EUKA) HSP 1 Score: 132 bits (331), Expect = 3.310e-35 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 1 KNVLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALD-HCSPGGGEGDLYL 249
KNVLVMHDGQNLFN STSFGGIAW C DT++ LVV G MEE++I+G YNTP+R+DEYTY YDPCY+ C GGG+GDLYL
Sbjct: 153 KNVLVMHDGQNLFNASTSFGGIAWNCDDTINQLVVEGQMEEVLIIGAYNTPDRLDEYTYVYDPCYTTNFKGDCEGGGGKGDLYL 236
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: F2E753_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E753_HORVV) HSP 1 Score: 125 bits (313), Expect = 1.560e-32 Identity = 52/83 (62.65%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 1 KNVLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
+NVLVM DGQNLFN ST+FGG W C T+D LVV G+++E++++G+YNTP+R+DEYTYSYDPCY C GGG+GDLYL
Sbjct: 159 RNVLVMQDGQNLFNASTAFGGTPWNCGSTIDQLVVQGAIDELLVIGVYNTPDRLDEYTYSYDPCYDTVRGKCVGGGGKGDLYL 241
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A482SUF6_9ARCH (Alpha/beta hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUF6_9ARCH) HSP 1 Score: 109 bits (273), Expect = 7.630e-27 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 4 NVLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
NVLVMHDGQNLF+P TS G AW+CQDT+D L+V G M+E++I+G YNTP+RI+EYTY YDP GG+GD+YL
Sbjct: 155 NVLVMHDGQNLFDPKTSAFGTAWMCQDTLDSLIVQGKMDEVVIIGAYNTPDRINEYTYIYDPSEES--------GGKGDIYL 228
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A7S3G7V2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G7V2_9EUKA) HSP 1 Score: 102 bits (253), Expect = 2.100e-25 Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 7 VLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
VL+MHDGQNLFN STSF GIAW CQDT+D L+V G + E+ ++ YNTP+R DEYTYSYDP GG+GD YL
Sbjct: 92 VLIMHDGQNLFNASTSFLGIAWQCQDTLDTLIVEGGIREVAVLAPYNTPDRTDEYTYSYDPTEQA--------GGKGDDYL 164
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A6B2LF31_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LF31_9EUKA) HSP 1 Score: 101 bits (251), Expect = 1.340e-24 Identity = 51/81 (62.96%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 7 VLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
VL MHDGQNLFN STSFGG +W CQDTV+ LVV G M+EIIIVG+ NT R DE TYSYDP GG GD YL
Sbjct: 26 VLFMHDGQNLFNDSTSFGGRSWRCQDTVNRLVVTGDMDEIIIVGIDNTVNRTDELTYSYDPSVQA--------GGNGDAYL 98
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A7S1CG26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG26_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.040e-22 Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 KNVLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSG 201
+N ++MHDG+NLFN STSFGGIAW C TVD LV G+MEE++IVG+ N R EYTYS DP Y G
Sbjct: 34 RNPILMHDGENLFNASTSFGGIAWRCDTTVDTLVAEGNMEEVVIVGVNNDINRTAEYTYSKDPTYGG 100
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A8J8NN20_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NN20_HALGN) HSP 1 Score: 96.7 bits (239), Expect = 2.390e-22 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 KNVLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
+N+L+MHDG NLF+P+T+F G AW+ Q+T++ L+ G +EE++++G YNT +R++EYTYSYDP GG+GDLYL
Sbjct: 63 ENILIMHDGNNLFDPATAFMGNAWMIQNTINPLIYQGKIEEVVVIGAYNTDDRMNEYTYSYDPSEKF--------GGKGDLYL 137
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A812QAD8_SYMMI (YbbA protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QAD8_SYMMI) HSP 1 Score: 92.8 bits (229), Expect = 1.580e-21 Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 16 MHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
MHDGQNLFN +T++ G AW+CQ+++D ++ G+ +E++IVG YNT +R+DEYTY YDP GA GG+GDLYL
Sbjct: 1 MHDGQNLFNKATAYMGNAWMCQESLDTSIIGGTTDEVLIVGAYNTADRMDEYTYVYDPS-EGA-------GGKGDLYL 70
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: A0A0L0DWX4_THETB (1 carbohydrate esterase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DWX4_THETB) HSP 1 Score: 90.1 bits (222), Expect = 1.030e-19 Identity = 44/80 (55.00%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 10 LVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
L+M DGQNLFN STSF GIAW CQ T++ L++ G + EI++VG+ NT RIDEYT SYDP G GG+ D YL
Sbjct: 108 LIMQDGQNLFNASTSFAGIAWDCQKTMNPLIIEGVVPEIVLVGVDNTAARIDEYTPSYDPSVGG--------GGKADTYL 179
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Match: D2VMS7_NAEGR (Esterase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VMS7_NAEGR) HSP 1 Score: 89.7 bits (221), Expect = 2.990e-19 Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 4 NVLVMHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNG----SMEEIIIVGLYNTPERIDEYTYSYDPCYSGALDHCSPGGGEGDLYL 249
N+L+MHDGQNLF+P+T+F AW+ Q+T+D L+ + +MEEII++G+ NTP+R++EYTYS D Y GGG+GDLYL
Sbjct: 185 NLLIMHDGQNLFDPATAFLNQAWMIQNTLDPLITSMDPSYAMEEIIVIGIDNTPDRLNEYTYSKDKDY---------GGGKGDLYL 261 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110892.2286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110892.2286.1 >prot_M-pyrifera_M_contig110892.2286.1 ID=prot_M-pyrifera_M_contig110892.2286.1|Name=mRNA_M-pyrifera_M_contig110892.2286.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp MHDGQNLFNPSTSFGGIAWLCQDTVDHLVVNGSMEEIIIVGLYNTPERIDback to top mRNA from alignment at M-pyrifera_M_contig110892:347..595- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110892.2286.1 ID=mRNA_M-pyrifera_M_contig110892.2286.1|Name=mRNA_M-pyrifera_M_contig110892.2286.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=249bp|location=Sequence derived from alignment at M-pyrifera_M_contig110892:347..595- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110892:347..595- >mRNA_M-pyrifera_M_contig110892.2286.1 ID=mRNA_M-pyrifera_M_contig110892.2286.1|Name=mRNA_M-pyrifera_M_contig110892.2286.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig110892:347..595- (Macrocystis pyrifera P11B4 male)back to top |