prot_M-pyrifera_M_contig99356.22857.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99356.22857.1
Unique Nameprot_M-pyrifera_M_contig99356.22857.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
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BLAST of mRNA_M-pyrifera_M_contig99356.22857.1 vs. uniprot
Match: A0A7Y3KW38_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7Y3KW38_9ACTN)

HSP 1 Score: 64.7 bits (156), Expect = 5.220e-10
Identity = 40/148 (27.03%), Postives = 64/148 (43.24%), Query Frame = 0 
Query:    3 LLVAEQHAVAADSFRVHRDGFYLHMRIVSR-NPTTDHSNQLFGSVVGDGTHQAAQLRWGLEFSDGLRAVAGDMS-----KAGFNIRLRGASGSSGLMEMDAWVNAIPSPGPMRFHLSWPEGGIAETSFAVPTGDIISASETATQLWPD 144
            L+ ++Q A+       +  GF   +  +SR NP       L   + G       +LR+G+ FSDG +A++   S     +A   +  RG  G       + W   +P  G M F   W +  + +TS  V    ++ A+  AT LWPD
Sbjct:   21 LVRSDQAAIIVSGLFAYPTGFAFSLEAISRLNPAPSPLGFLRPGIAGRDGSSGGELRFGIGFSDGSKALSRRNSMPSAERAVRRLHPRGGGGGGRKWSQEFWCEPLPPAGLMAFVFEWRDFAVPQTSIEVDASAVLEAASQATPLWPD 168
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99356.22857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7Y3KW38_9ACTN5.220e-1027.03Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99356contigM-pyrifera_M_contig99356:49..483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99356.22857.1mRNA_M-pyrifera_M_contig99356.22857.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99356 31..483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99356.22857.1 ID=prot_M-pyrifera_M_contig99356.22857.1|Name=mRNA_M-pyrifera_M_contig99356.22857.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
MALLVAEQHAVAADSFRVHRDGFYLHMRIVSRNPTTDHSNQLFGSVVGDG
THQAAQLRWGLEFSDGLRAVAGDMSKAGFNIRLRGASGSSGLMEMDAWVN
AIPSPGPMRFHLSWPEGGIAETSFAVPTGDIISASETATQLWPD*
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