prot_M-pyrifera_M_contig9932.22851.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig9932.22851.1
Unique Name	prot_M-pyrifera_M_contig9932.22851.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	85

Homology

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: D8LR28_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR28_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 9.950e-40
Identity = 69/84 (82.14%), Postives = 79/84 (94.05%), Query Frame = 0

Query:    1 MLAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDR 84
            MLAVPRPLQLERILP+VASLGVTT+VLCQA+KVPKFYFGSH FRDP S+REKLIEGLSQ GDT++P++ VARRL +FL+DDLDR
Sbjct:  203 MLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVMPEVMVARRLKIFLEDDLDR 286

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A6H5KW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW92_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.220e-32
Identity = 66/103 (64.08%), Postives = 76/103 (73.79%), Query Frame = 0

Query:    1 MLAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTI-------------------LPDIRVARRLTVFLDDDLDR 84
            MLAVPRPL+LERILP+VASLGVTT+VLCQA+KVPKFYFGSH FRDP S+R KLIEGLSQ  D +                   LP++ VARRL +FL+DDLDR
Sbjct:  115 MLAVPRPLKLERILPVVASLGVTTIVLCQAKKVPKFYFGSHFFRDPLSVRAKLIEGLSQVSDEVRVFRQVKHFDNMENRAAFVLPEVIVARRLNIFLEDDLDR 217

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A7S2KRF7_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRF7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 4.300e-25
Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 0

Query:    1 MLAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDRL 85
            +LA+PRPLQL RILP+V+ LGV  L+L  A KVPK YFGSH+FR P  +R  L+EGL+Q GD  LP++ V +RL VF++D+LD L
Sbjct:   43 LLALPRPLQLSRILPMVSQLGVDQLILTNAMKVPKDYFGSHIFRKPEVLRGLLMEGLAQSGDVRLPNVHVTKRLKVFVEDELDVL 127

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A1Z5JKH5_FISSO (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKH5_FISSO)

HSP 1 Score: 103 bits (258), Expect = 4.670e-25
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 0

Query:    2 LAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDRL 85
            LA+PRPLQL R+LP+++ +GV  LVL +ARKVPK YFGSHLFR P  + E+LIEGL Q GDT LP + V + L+ F+DD LD L
Sbjct:  128 LALPRPLQLGRMLPMISQMGVDHLVLTEARKVPKDYFGSHLFRKPELLTERLIEGLCQSGDTKLPQVTVVKNLSQFMDDTLDEL 211

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A6V2MGD3_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MGD3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.820e-25
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 0

Query:    2 LAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDRL 85
            LA+PRPLQL RILP+VA LGV  LVL  A+KVPK YFGSHLFR P+ +R  LIEGL Q GD  +P + V RRL  FL+DDLD +
Sbjct:  254 LALPRPLQLGRILPMVAQLGVDHLVLTSAQKVPKDYFGSHLFRKPNELRRHLIEGLCQAGDVKIPKVTVVRRLKPFLEDDLDSM 337

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A7S1FT39_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT39_9STRA)

HSP 1 Score: 103 bits (256), Expect = 5.500e-25
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0

Query:    2 LAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLD 83
            LA PRPL L RILP+V+ +GV  LVLC A KVPK YFGSHLFR    + + L+EGL Q GD  LP++ VARRL +FL+DDLD
Sbjct:   75 LACPRPLALRRILPVVSMMGVDRLVLCGASKVPKDYFGSHLFRKEEEITKLLVEGLCQAGDVRLPEVTVARRLKIFLEDDLD 156

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A7S1BIA7_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIA7_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.750e-24
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0

Query:    2 LAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLD 83
            LA PRPL L RILP+V+ +GV  LVLC A KVPK YFGSHLFR    + + L+EGL Q GD  LP++ VARRL +FL+DDLD
Sbjct:  184 LACPRPLALRRILPVVSMMGVDRLVLCGASKVPKDYFGSHLFRKEEEITKLLVEGLCQAGDVRLPEVTVARRLKIFLEDDLD 265

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A835YRY5_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 6.830e-24
Identity = 49/85 (57.65%), Postives = 65/85 (76.47%), Query Frame = 0

Query:    1 MLAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDRL 85
            +LA PRPLQLER+LP+++SLGV +LVL  A KV K YFGSHL R P ++R KL+EG +Q G T+LP   + RRL +FL+D+L+ L
Sbjct:  222 LLAAPRPLQLERMLPMISSLGVDSLVLINAAKVEKSYFGSHLMRKPEALRAKLVEGCTQSGSTVLPRTTIKRRLKIFLEDELESL 306

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: B7FST2_PHATC (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FST2_PHATC)

HSP 1 Score: 100 bits (249), Expect = 1.420e-23
Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 0

Query:    2 LAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDRL 85
            LA+PRPLQL R+LP+++ +GV  LVL QA+KVPK YFGSHL R+P  +REKLIEGL Q GD  LP + + R L  FL +++D +
Sbjct:  156 LALPRPLQLGRMLPMISQMGVNHLVLAQAQKVPKDYFGSHLLRNPEELREKLIEGLCQAGDVRLPQLHIVRNLRDFLTNEVDEI 239

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BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Match: A0A1Z5K163_FISSO (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K163_FISSO)

HSP 1 Score: 99.8 bits (247), Expect = 2.660e-23
Identity = 49/84 (58.33%), Postives = 63/84 (75.00%), Query Frame = 0

Query:    2 LAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMREKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDRL 85
            LA+PRPLQL R+LP+++ +GV  LVL +ARKVPK YFGSHLFR P  + E+LIEGL Q GDT LP + + + L+ FLD  +D L
Sbjct:  150 LALPRPLQLGRMLPMISQMGVDHLVLTEARKVPKDYFGSHLFRKPELLTERLIEGLCQSGDTKLPKVTIVKSLSQFLDGKVDEL 233

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig9932.22851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LR28_ECTSI	9.950e-40	82.14	16S rRNA (uracil(1498)-N(3))-methyltransferase n=1...	[more]
A0A6H5KW92_9PHAE	1.220e-32	64.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2KRF7_9STRA	4.300e-25	58.82	16S rRNA (uracil(1498)-N(3))-methyltransferase (Fr...	[more]
A0A1Z5JKH5_FISSO	4.670e-25	60.71	16S rRNA (uracil(1498)-N(3))-methyltransferase n=1...	[more]
A0A6V2MGD3_9STRA	4.820e-25	64.29	16S rRNA (uracil(1498)-N(3))-methyltransferase n=2...	[more]
A0A7S1FT39_9STRA	5.500e-25	62.20	16S rRNA (uracil(1498)-N(3))-methyltransferase n=1...	[more]
A0A7S1BIA7_9STRA	2.750e-24	62.20	16S rRNA (uracil(1498)-N(3))-methyltransferase n=1...	[more]
A0A835YRY5_9STRA	6.830e-24	57.65	16S rRNA (uracil(1498)-N(3))-methyltransferase n=1...	[more]
B7FST2_PHATC	1.420e-23	57.14	16S rRNA (uracil(1498)-N(3))-methyltransferase n=2...	[more]
A0A1Z5K163_FISSO	2.660e-23	58.33	16S rRNA (uracil(1498)-N(3))-methyltransferase n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006700	Ribosomal RNA small subunit methyltransferase E	PFAM	PF04452	Methyltrans_RNA	coord: 2..81 e-value: 1.4E-9 score: 37.6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..30
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 31..85
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 2..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig9932	contig	M-pyrifera_M_contig9932:7632..9509 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig9932.22851.1	mRNA_M-pyrifera_M_contig9932.22851.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig9932 7622..9509 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig9932.22851.1 ID=prot_M-pyrifera_M_contig9932.22851.1|Name=mRNA_M-pyrifera_M_contig9932.22851.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
MLAVPRPLQLERILPIVASLGVTTLVLCQARKVPKFYFGSHLFRDPSSMR
EKLIEGLSQCGDTILPDIRVARRLTVFLDDDLDRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006700	rRNA_ssu_MeTrfase-E
IPR029028	Alpha/beta_knot_MTases