prot_M-pyrifera_M_contig9910.22801.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9910.22801.1
Unique Nameprot_M-pyrifera_M_contig9910.22801.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length386
Homology
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BLAST of mRNA_M-pyrifera_M_contig9910.22801.1 vs. uniprot
Match: D8LL20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL20_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 1.500e-125
Identity = 226/389 (58.10%), Postives = 256/389 (65.81%), Query Frame = 0 
Query:   20 MQAVLSSASLHPPPGASLDAVASPATLGGXXXXASGLAPDLMAVSEKLDLVVLCAGNTIRAVNLAEPSDGGSYSXXXXXXXXXXXXXXXXXXXXXXXHQHDPFREVSFAADCAPRPGDDTIPSDSIPAKTPIKGLEFSPSGHSLLVWGESYVAVARLPRSASRGGLLGGPNPTS------------RDDGGATPVRGDGGRRG--GDPGARWKWTLVDMSGYVVDVRRQRVVQAVWHPASDSCVTLLTVGRED------GGGGGAFVMLHVPGRERPEQVVQIPDGPSASPPVAIAHGRSAGWQRYAIWIARRDGSVAALCPVVPENAKIDSEELLDLWSVTADTLVAARWER--HSGNAVQNQSALDEEIARLEQQQAWLRDTFGNVF 386
            MQ VL SASLHPP                X   AS +A +LMAVS  L L +LC  NTIRAV+L +  D  +++                        + DPF  VSF+ADCAPRPGDD IPSDSIP KTPIKGL+FSPSGHSLL+WGESYVAVARLPRSA      GG NPT             RD   +   RG  G  G  GD  ARWKWTLVDMSGY VDV RQR+V A WHPASD CVTLLT G++D      G G  AFVMLHVPGRERPEQV+ IPDGP+ SPPVA+AH    GWQR+ IWIA++DGSV ALCPVVP+ AK+DSEEL+ LWS T DTLVAARWE+   SG   Q QSALDEE+ARLEQQ+ WLR+TF +VF
Sbjct:    1 MQLVLRSASLHPPXXXXXXXX----XXXXXGATASVVASELMAVSAGLHLAMLCRSNTIRAVSLMDVPDAAAHAPSSGSIRTPSSAQQR--------REDDPFHAVSFSADCAPRPGDDVIPSDSIPPKTPIKGLQFSPSGHSLLIWGESYVAVARLPRSAR---TTGGSNPTHGVPPATPFLSPPRDLTASGRRRGTAGGDGTSGDKSARWKWTLVDMSGYAVDVMRQRIVHAAWHPASDGCVTLLTAGKDDVYVAVAGVGAKAFVMLHVPGRERPEQVLPIPDGPNVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVAARWEQAHQSGTDSQQQSALDEEVARLEQQKGWLRETFSHVF 374
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9910.22801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL20_ECTSI1.500e-12558.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037700Nucleoporin NUP88/NUP82PANTHERPTHR13257NUCLEOPORIN NUP84-RELATEDcoord: 141..382

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9910contigM-pyrifera_M_contig9910:285..3631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9910.22801.1mRNA_M-pyrifera_M_contig9910.22801.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9910 285..3631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9910.22801.1 ID=prot_M-pyrifera_M_contig9910.22801.1|Name=mRNA_M-pyrifera_M_contig9910.22801.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=386bp
MAMYTTPVARRTPSAAATHMQAVLSSASLHPPPGASLDAVASPATLGGGG
GGASGLAPDLMAVSEKLDLVVLCAGNTIRAVNLAEPSDGGSYSSSNNNNN
GSRNSGGTAAQRQQQQHQHDPFREVSFAADCAPRPGDDTIPSDSIPAKTP
IKGLEFSPSGHSLLVWGESYVAVARLPRSASRGGLLGGPNPTSRDDGGAT
PVRGDGGRRGGDPGARWKWTLVDMSGYVVDVRRQRVVQAVWHPASDSCVT
LLTVGREDGGGGGAFVMLHVPGRERPEQVVQIPDGPSASPPVAIAHGRSA
GWQRYAIWIARRDGSVAALCPVVPENAKIDSEELLDLWSVTADTLVAARW
ERHSGNAVQNQSALDEEIARLEQQQAWLRDTFGNVF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037700NUP88/NUP82