prot_M-pyrifera_M_contig99081.22797.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99081.22797.1
Unique Nameprot_M-pyrifera_M_contig99081.22797.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99081.22797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 65..105
e-value: 0.011
score: 24.9
coord: 24..64
e-value: 12.0
score: 12.5
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 76..118
score: 9.782
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..126
e-value: 5.4E-27
score: 96.4
NoneNo IPR availablePANTHERPTHR23315:SF7RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN-RELATEDcoord: 3..125
NoneNo IPR availablePANTHERPTHR23315BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAININGcoord: 3..125
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99081contigM-pyrifera_M_contig99081:9..386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99081.22797.1mRNA_M-pyrifera_M_contig99081.22797.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99081 3..386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99081.22797.1 ID=prot_M-pyrifera_M_contig99081.22797.1|Name=mRNA_M-pyrifera_M_contig99081.22797.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
MMSSGSETEKEIAALALKNLVIASPRNQDAICRAGGITLVVSLLTTGSRR
AKEIAAEVLINLAMRPTHSAAIREHGDIAPLVSLLSAGSEEGKCHAAFAL
ANLAALGANRDAIREAGGVEALVFLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold