prot_M-pyrifera_M_contig99077.22793.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99077.22793.1
Unique Nameprot_M-pyrifera_M_contig99077.22793.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length212
Homology
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A6A4VEQ5_AMPAM (DNA topoisomerase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VEQ5_AMPAM)

HSP 1 Score: 180 bits (457), Expect = 8.930e-52
Identity = 97/212 (45.75%), Postives = 132/212 (62.26%), Query Frame = 0
Query:    1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            KQ S ++E + + L ++AR    L +W DCDREGENI  E++ VCR VN  L+V RARFS + PA V RA   + +PD + +AAVD RQELDLRIGAAFTR QT+ L+ V P  + D  ++SYG CQFPT GFVVER+  I+ F PE FW +++    PEG        W+R R+FDE     L +   +      A +   +++P+ KW+P
Sbjct:   87 KQCSTDYEPIMRTLEREARRCQMLVIWTDCDREGENIGFEIINVCRAVNPQLKVLRARFSEITPASVRRAVNNLVEPDGRASAAVDVRQELDLRIGAAFTRFQTLRLKQVFPARLAD-HLISYGSCQFPTLGFVVERYKAIQSFIPESFWKIKVSHMRPEGNVD---FNWKRVRLFDEACCRALFERCCE---NSTATITHVQSKPKSKWRP 291          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A1I8IDZ5_9PLAT (DNA topoisomerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IDZ5_9PLAT)

HSP 1 Score: 178 bits (452), Expect = 9.460e-51
Identity = 99/213 (46.48%), Postives = 135/213 (63.38%), Query Frame = 0
Query:    1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTA-LVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            KQ+ R+++ +   L + A++A  L +W DCDREGENI ME+V VC   N  L V RA+FS +    V RA A +   D +++ AVDARQELDLRIGAAFTR QT+ LR V P ++ D ++VSYG CQFPT GFVVERF +   F PE FW LR+L  +P+ G     L W+R RV+D+    + L  V    +    A V+  E++P+ +W+P
Sbjct:   87 KQIQRDYQPIRDTLTQLAKSAQRLVIWTDCDREGENIGMEIVNVCMASNPRLDVYRAKFSEITRPAVQRALASLTRMDERVSDAVDARQELDLRIGAAFTRFQTLRLRQVFPAVLAD-QLVSYGSCQFPTLGFVVERFKEAERFQPEPFWRLRVLAESPDTGQSAEFL-WKRGRVYDQAVGQMFLAHVLESPI----ATVISVESKPKNRWRP 293          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A6A4WHV7_AMPAM (DNA topoisomerase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WHV7_AMPAM)

HSP 1 Score: 180 bits (457), Expect = 2.780e-50
Identity = 97/212 (45.75%), Postives = 132/212 (62.26%), Query Frame = 0
Query:    1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            KQ S ++E + + L ++AR    L +W DCDREGENI  E++ VCR VN  L+V RARFS + PA V RA   + +PD + +AAVD RQELDLRIGAAFTR QT+ L+ V P  + D  ++SYG CQFPT GFVVER+  I+ F PE FW +++    PEG        W+R R+FDE     L +   +      A +   +++P+ KW+P
Sbjct:  139 KQCSTDYEPIMRTLEREARRCQMLVIWTDCDREGENIGFEIINVCRAVNPQLKVLRARFSEITPASVRRAVNNLVEPDGRASAAVDVRQELDLRIGAAFTRFQTLRLKQVFPARLAD-HLISYGSCQFPTLGFVVERYKTIQSFIPESFWKIKVSHMRPEGNVD---FNWKRVRLFDEACCRALFERCCE---NSTATITHVQSKPKSKWRP 343          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A4Q2DJP5_9AGAR (DNA topoisomerase n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DJP5_9AGAR)

HSP 1 Score: 178 bits (452), Expect = 7.420e-49
Identity = 97/203 (47.78%), Postives = 132/203 (65.02%), Query Frame = 0
Query:   12 QNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGA--LRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            +NL  QAR  + L +W DCDREGE+I ME+V +CRRV   +RV+RARFSA++P ++ RAA    + D + A AVDAR  LDL+IGAAFTR+QT+ LR V+P  V +  ++S+GPCQFPT GFVVERF++++ F PE+FW + L +    G G   A   RW+R  + D  TA+ L    T  +    ARV     +  +KWKP
Sbjct:   96 ENLMTQARRVATLMIWTDCDREGEHIGMEIVNICRRVKPNIRVQRARFSAIIPQQIHRAAQNPVELDRRQADAVDARIILDLKIGAAFTRLQTLTLRNVIP--VPEKSVISFGPCQFPTLGFVVERFMKVKDFRPEQFWLIHLELTRDLGNGDSEAAEFRWKRGHLLDHHTAISL---YTSVLENPRARVTNVTRKETKKWKP 293          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A6A4WJK8_AMPAM (DNA topoisomerase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WJK8_AMPAM)

HSP 1 Score: 180 bits (457), Expect = 9.050e-49
Identity = 97/212 (45.75%), Postives = 132/212 (62.26%), Query Frame = 0
Query:    1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            KQ S ++E + + L ++AR    L +W DCDREGENI  E++ VCR VN  L+V RARFS + PA V RA   + +PD + +AAVD RQELDLRIGAAFTR QT+ L+ V P  + D  ++SYG CQFPT GFVVER+  I+ F PE FW +++    PEG        W+R R+FDE     L +   +      A +   +++P+ KW+P
Sbjct:  139 KQCSTDYEPIMRTLEREARRCQMLVIWTDCDREGENIGFEIINVCRAVNPQLKVLRARFSEITPASVRRAVNNLVEPDGRASAAVDVRQELDLRIGAAFTRFQTLRLKQVFPARLAD-HLISYGSCQFPTLGFVVERYKTIQSFIPESFWKIKVSHMRPEGNVD---FNWKRVRLFDEACCRALFERCCE---NSTATITHVQSKPKSKWRP 343          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: UPI0002C3EE62 (DNA topoisomerase 3-alpha, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=UPI0002C3EE62)

HSP 1 Score: 176 bits (445), Expect = 3.320e-48
Identity = 93/200 (46.50%), Postives = 133/200 (66.50%), Query Frame = 0
Query:   13 NLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            NL+  A+ A  L LWLDCDREGENI+ EV+ VC  VN+ L+V RA F+++VP E+ RA   +  PD  ++ AVD RQELDLR GAAFTR QT LL+  VP +++DL+++SYG CQFPT GFV++R+ QI+ F  E+F+ ++ +V+     G      W+R R+FD +  L+L + A D V Q  A++ E   + +  +KP
Sbjct:  102 NLKDVAKGADTLVLWLDCDREGENISFEVIDVCESVNKHLKVFRAHFNSLVPVEIARAYRTLTPPDKNLSDAVDIRQELDLRTGAAFTRFQTTLLKRQVP-VLKDLKVISYGACQFPTLGFVIDRYYQIKSFTKEKFYKIKCIVKKE---GIETEFLWDRNRLFDRIACLILYEDALDKVKQ--AKITEILQKSKTNFKP 295          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A267E745_9PLAT (DNA topoisomerase (Fragment) n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267E745_9PLAT)

HSP 1 Score: 178 bits (452), Expect = 4.430e-48
Identity = 99/213 (46.48%), Postives = 135/213 (63.38%), Query Frame = 0
Query:    1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTA-LVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            KQ+ R+++ +   L + A++A  L +W DCDREGENI ME+V VC   N  L V RA+FS +    V RA A +   D +++ AVDARQELDLRIGAAFTR QT+ LR V P ++ D ++VSYG CQFPT GFVVERF +   F PE FW LR+L  +P+ G     L W+R RV+D+    + L  V    +    A V+  E++P+ +W+P
Sbjct:  125 KQIQRDYQPIRDTLTQLAKSAQRLVIWTDCDREGENIGMEIVNVCMASNPRLDVYRAKFSEITRPAVQRALASLTRMDERVSDAVDARQELDLRIGAAFTRFQTLRLRQVFPAVLAD-QLVSYGSCQFPTLGFVVERFKEAERFQPEPFWRLRVLAESPDTGQSAEFL-WKRGRVYDQAVGQMFLAHVLESPI----ATVISVESKPKNRWRP 331          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A1I8GFT8_9PLAT (DNA topoisomerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GFT8_9PLAT)

HSP 1 Score: 177 bits (449), Expect = 5.310e-48
Identity = 99/213 (46.48%), Postives = 135/213 (63.38%), Query Frame = 0
Query:    1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTA-LVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            KQ+ R+++ +   L + A++A  L +W DCDREGENI ME+V VC   N  L V RA+FS +    V RA A +   D +++ AVDARQELDLRIGAAFTR QT+ LR V P ++ D ++VSYG CQFPT GFVVERF +   F PE FW LR+L  +P+ G     L W+R RV+D+    + L  V    +    A V+  E++P+ +W+P
Sbjct:   87 KQIQRDYQPIRDTLTQLAKSAQRLVIWTDCDREGENIGMEIVNVCMASNPRLDVYRAKFSEITRPAVQRALASLTRMDERVSDAVDARQELDLRIGAAFTRFQTLRLRQVFPAVLAD-QLVSYGSCQFPTLGFVVERFKEAERFQPEPFWRLRVLAESPDTGQSVEFL-WKRGRVYDQAVGQMFLAHVLESPI----ATVISVESKPKNRWRP 293          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: W7U2W4_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2W4_9STRA)

HSP 1 Score: 170 bits (430), Expect = 5.530e-48
Identity = 99/217 (45.62%), Postives = 133/217 (61.29%), Query Frame = 0
Query:    1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGA-----LRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            K+V ++ E L + L+ +AR    L LWLDCD EGENIA EV+ VCR  N  LRV RARFSA++P E+  A   + +P++  + AV+AR E+DLRIGAAFTR QT+ L+    D V D  I+SYGPCQFPT GFVV+R+  I  F  E FW +++  R     G GG       +W+R+R+FDE    VL  +  +A   + ARV    A P  + +P
Sbjct:   93 KKVGKDKESLERCLKSEARVCQRLILWLDCDLEGENIAFEVMDVCRAANSRLRVERARFSALIPREIWHALEHLVEPNVYQSEAVNARMEIDLRIGAAFTRFQTLKLQGKF-DGVED-SIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGGREDGDGGPQGITRFQWKRERLFDEAACAVLYVMVVEA---KEARVTHVNAAPATRDRP 304          
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A8K0JLW5_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JLW5_9TREE)

HSP 1 Score: 177 bits (449), Expect = 8.920e-48
Identity = 93/203 (45.81%), Postives = 135/203 (66.50%), Query Frame = 0
Query:   10 LAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 212
            +AQNL+++AR A  L +W DCDREGE+I  E+V VCR VN  LRV+RARFSA++PA++ RA     + D++ A AVDAR  LDLR+GAAFTR+QTM L+  VPD+  D +++SYGPCQ+PT GFV ++  +++ F PE FW + + +   +        +W R  +FD   A+VL ++  ++     ARV   + +P +KWKP
Sbjct:  100 VAQNLKEEARRADILMIWTDCDREGEHIGQEIVNVCREVNARLRVKRARFSAIIPAQIHRACQNPFELDVRQAEAVDARISLDLRLGAAFTRLQTMTLQQRVPDL--DGKVISYGPCQYPTLGFVCDQHFRVQNFVPETFWYISVGLERDDNNV---QFKWSRGHLFDFEMAVVLYEICVESPM---ARVTNVKTKPTQKWKP 294          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4VEQ5_AMPAM8.930e-5245.75DNA topoisomerase n=1 Tax=Amphibalanus amphitrite ... [more]
A0A1I8IDZ5_9PLAT9.460e-5146.48DNA topoisomerase n=1 Tax=Macrostomum lignano TaxI... [more]
A0A6A4WHV7_AMPAM2.780e-5045.75DNA topoisomerase n=1 Tax=Amphibalanus amphitrite ... [more]
A0A4Q2DJP5_9AGAR7.420e-4947.78DNA topoisomerase n=1 Tax=Candolleomyces aberdaren... [more]
A0A6A4WJK8_AMPAM9.050e-4945.75DNA topoisomerase n=2 Tax=Amphibalanus amphitrite ... [more]
UPI0002C3EE623.320e-4846.50DNA topoisomerase 3-alpha, putative n=1 Tax=Entamo... [more]
A0A267E745_9PLAT4.430e-4846.48DNA topoisomerase (Fragment) n=2 Tax=Macrostomum l... [more]
A0A1I8GFT8_9PLAT5.310e-4846.48DNA topoisomerase n=1 Tax=Macrostomum lignano TaxI... [more]
W7U2W4_9STRA5.530e-4845.62DNA topoisomerase n=1 Tax=Nannochloropsis gaditana... [more]
A0A8K0JLW5_9TREE8.920e-4845.81Uncharacterized protein n=2 Tax=Filobasidium flori... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableGENE3D3.40.50.140coord: 1..77
e-value: 4.2E-20
score: 74.4
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 2..212
IPR003601DNA topoisomerase, type IA, domain 2SMARTSM00436topIban2coord: 53..151
e-value: 2.2E-24
score: 97.0
IPR006171TOPRIM domainPFAMPF01751Toprimcoord: 6..61
e-value: 1.6E-9
score: 37.9
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 1..60
score: 13.347
IPR013825DNA topoisomerase, type IA, central region, subdomain 2GENE3D2.70.20.10coord: 145..210
e-value: 1.7E-33
score: 117.7
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10coord: 84..144
e-value: 1.7E-33
score: 117.7
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 78..212
e-value: 6.6E-19
score: 68.2
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 2..212
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 3..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99077contigM-pyrifera_M_contig99077:4..690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99077.22793.1mRNA_M-pyrifera_M_contig99077.22793.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99077 4..690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99077.22793.1 ID=prot_M-pyrifera_M_contig99077.22793.1|Name=mRNA_M-pyrifera_M_contig99077.22793.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp
KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNR
ALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFT
RMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFW
SLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVV
EREARPRRKWKP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003601Topo_IA_2
IPR006171TOPRIM_domain
IPR013825Topo_IA_cen_sub2
IPR013824Topo_IA_cen_sub1
IPR013497Topo_IA_cen
IPR000380Topo_IA
IPR023405Topo_IA_core_domain