prot_M-pyrifera_M_contig99055.22785.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99055.22785.1
Unique Nameprot_M-pyrifera_M_contig99055.22785.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length196
Homology
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A3D5DD52_9GAMM (Fe/B12 periplasmic-binding domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DD52_9GAMM)

HSP 1 Score: 160 bits (404), Expect = 1.480e-45
Identity = 88/156 (56.41%), Postives = 109/156 (69.87%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPAL 156
            L PDLVL G +TA+G   LL++LG+ VL F+P LD+D FR SF RLA AIGA  +A +LL  MD+ I   ++   T  P AIIY+PNGFSPG +SLA++ML  AG  NLA +F IE+GGFVPLE+LVVA PD V+L       PALA+  L HPAL
Sbjct:   91 LDPDLVLAGSYTATGTTTLLKQLGYRVLIFKPVLDIDGFRNSFLRLADAIGAIEKANQLLIKMDKDIAEIKKPETTLWPRAIIYQPNGFSPGVQSLANEMLDIAGVTNLAAEFNIEHGGFVPLEQLVVAKPDVVILPGQFKRFPALANIFLTHPAL 246          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A2E8PHP2_9RHOB (Cobalamin ABC transporter substrate-binding protein n=3 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A2E8PHP2_9RHOB)

HSP 1 Score: 137 bits (346), Expect = 4.060e-36
Identity = 78/191 (40.84%), Postives = 112/191 (58.64%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAA 191
            ++PDLVL G +TA     +LRRLGF V +F P  D D  RA+ RR+ A +G   +AE + A MD R+E +R      RP A +     +S G  +LAH+++ AAG RNL  + GI     +PLERLV+ AP+ +L+ A P   P+L++  + HPAL   + R    R+ +A+  W CG  F AEA+  L+A
Sbjct:  112 MRPDLVLAGTYTARETVSMLRRLGFRVETFAPEADFDVIRANIRRMGALLGREAQAEAMTAEMDARLEAARPAPDAPRPLAALLEAASWSSGAGTLAHEIVTAAGLRNLGAELGITGMARLPLERLVMGAPE-LLIAARPYTPPSLSEQGMRHPALAPLQARAG--RVALADARWVCGAPFTAEAVADLSA 299          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: UPI001430E23B (ABC transporter substrate-binding protein n=1 Tax=Pseudooceanicola sp. HF7 TaxID=2721560 RepID=UPI001430E23B)

HSP 1 Score: 132 bits (331), Expect = 2.140e-34
Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAAF 192
            +QPDLVL G +T+     +LRRLG  VL  +PA  L   R    R+ AA+G  VRAE L+A  D R+E+ R     + P+A IY  NG++ G R+LA ++L+AAGF N+A D     GG +PLE+L +A P+  L+   P    + ++A+L HP +   RDR+      +A++ W CG  ++ +A+E LA F
Sbjct:   88 MQPDLVLAGGYTSRATVSMLRRLGREVLEVQPAYSLADIRDRLARIGAALGREVRAEALIADFDARLEVLRAEVARS-PSAAIYYANGYTTGDRTLAGEILMAAGFSNIAGDMR---GGHLPLEKLAMADPE-ALITGTPYPGASRSEAVLAHPVVQAIRDRRASH--PVADRDWLCGTPYVLQAVEELAIF 272          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A2D9F7Y4_9PROT (ABC transporter substrate-binding protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F7Y4_9PROT)

HSP 1 Score: 132 bits (333), Expect = 2.410e-34
Identity = 75/192 (39.06%), Postives = 107/192 (55.73%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTAR--PTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLA 190
            L+PDL+L G +T      +LRR G  +L+ +PA        + RR+  A+G + +AER++   DRR+   R+R+   R  P  I+ +P G + G  SL   +L AAG RNL+ D G+   GF+PLERL+ A PD +++ A   + P+L    L HPA     D    RRIE+    WTCGG   AEA+  LA
Sbjct:  111 LRPDLILAGTYTTRATTTILRRFGHRILTLDPASGFADIHDNIRRVGKALGEAPKAERIIYDFDRRLADVRRRSSPGRLAPRTIVLQPRGMTTGPGSLVDGILRAAGLRNLSADLGVTGMGFLPLERLIAARPDLLVVAARTAERPSLTHQALHHPAHAALGDA---RRIELPASLWTCGGPQAAEAVARLA 299          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A418SIS3_9RHOB (Vitamin B12-binding protein n=1 Tax=Pseudooceanicola algae TaxID=1537215 RepID=A0A418SIS3_9RHOB)

HSP 1 Score: 131 bits (330), Expect = 2.880e-34
Identity = 80/192 (41.67%), Postives = 113/192 (58.85%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAAF 192
            LQPDLVL G +T+     +LRRLG  V+   PA  LD  R    ++ AA+G    A  L+A  D R++  R +T T  PTA IY  NG++ G R+LA  +L+AAGF N+A D G   GG +PLERLV+A P+  L+  +P    + ++ IL HPA+   RD+  LR   +A++ W CG   + +A+  LA F
Sbjct:   86 LQPDLVLAGSYTSRATVSMLRRLGREVVEVRPAYSLDDIRDRITQVGAALGRDAAAADLIADFDARLDALRVQT-TRNPTAAIYYANGYTTGDRTLAGQILMAAGFENIAGDMG---GGHLPLERLVMARPE-ALITGSPYPGASRSEEILRHPAVAALRDQSALR--VVADRDWLCGTPHVLKAVAALAEF 270          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A2T0WZ95_9RHOB (Iron complex transport system substrate-binding protein n=1 Tax=Hasllibacter halocynthiae TaxID=595589 RepID=A0A2T0WZ95_9RHOB)

HSP 1 Score: 127 bits (320), Expect = 9.260e-33
Identity = 81/190 (42.63%), Postives = 110/190 (57.89%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLA 190
            + PDLVL G  +   A D+L  LG  V +FEPA DL    A  RR+ A +G   RAE L A  + R+E  R  T   RP A +Y  NG++ G R+LA  +L+AAGFRN+A + G   GG +PLE LV+AAP+ V++        + ++ IL HPA+   R+    RR  IA++ W CG  F+  AIE LA
Sbjct:   85 MDPDLVLAGSFSGRAAADMLAGLGIPVETFEPATDLGDVAAGLRRVGALLGREERAEALAAGFEARLEALRDETGR-RPRAALYYANGYTLGDRTLAGQILLAAGFRNVAAEAGFPAGGVMPLEVLVMAAPE-VVVTGQRYPGASRSEEILDHPAVRALREG---RRGGIADQDWVCGTPFVLRAIEDLA 269          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: UPI000478321F (ABC transporter substrate-binding protein n=1 Tax=Neomegalonema perideroedes TaxID=217219 RepID=UPI000478321F)

HSP 1 Score: 126 bits (317), Expect = 2.410e-32
Identity = 72/180 (40.00%), Postives = 103/180 (57.22%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQ-RTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIA-EKYWTCG 178
            L PDLVL G  T++    +L RLG  V    PA DL+   A  RR+   +G   +AE + A  +  + + R     + RP A +Y  NG++PG +SLA D+L  AGF ++A +FG++YGGFVPLE LV+A PD V+      +  A  + IL+HPAL   R R   R +E+  ++ W CG
Sbjct:   76 LNPDLVLAGTFTSAATVGMLERLGLRVERLAPAYDLEEIAALIRRMGGLLGREAQAEAMAAEFEADLAVLRAGAAESTRPRAALYEANGYAPGEKSLAADLLRTAGFASVAAEFGLDYGGFVPLELLVLAEPDVVIAGRPRAEGAARGEEILVHPALEALRAR---RGVEVLPDRDWICG 252          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A168TWA6_9CYAN (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Phormidium willei BDU 130791 TaxID=399101 RepID=A0A168TWA6_9CYAN)

HSP 1 Score: 126 bits (317), Expect = 3.100e-32
Identity = 81/195 (41.54%), Postives = 105/195 (53.85%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRI-ELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAAFAA 194
            L+PDLVL G ++       L+RLG  VL    A D D  RA+ RRL AA+    RAE L+A  D R+ +L         P A IY  NG+S G   L H +L AAG RNLA    ++    +PLE LV A PD V+  A+P  +PALA+A+L HPA      R   R + +    W+CG   IA+A+  LAA  A
Sbjct:   87 LRPDLVLAGSYSTRSTVFGLKRLGIPVLEMTAAGDFDGIRANLRRLGAALEVQARAEELIAAFDARLADLKPAAGAAPPPLAAIYAANGWSAGPGHLRHAVLEAAGLRNLASTAKVDKRSQLPLEVLVAAQPDLVITPASPPQAPALAEALLAHPAFRSLEARA--RFVGMPNALWSCGTPLIAQAVARLAAATA 279          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: UPI000CD3295F (ABC transporter substrate-binding protein n=1 Tax=Tabrizicola sp. XJSP TaxID=2030009 RepID=UPI000CD3295F)

HSP 1 Score: 124 bits (311), Expect = 2.290e-31
Identity = 74/190 (38.95%), Postives = 107/190 (56.32%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLL-DANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHL 189
            L PDLVL G  TA     +L+RLG  V +F PA  L   R     +  A+G   RA  +LA  D  +  +    P  RPTA  Y  NG++PG  SL+ D++ AAGFR+LA + G+  GGF+PLE LV+AAPD V++ +  P +S A  + IL HPAL++ R  +      + ++ W CG   + +A+  +
Sbjct:   89 LNPDLVLAGTFTAGATVSMLKRLGIPVATFPPAASLAEVRQGMIDMGVALGQRDRAAAMLARFDAGLAEAAGAAPDDRPTAATYAANGYTPGGNSLSGDIIRAAGFRHLAAELGLTQGGFLPLEALVLAAPDLVVVGETYPGNSRA--EEILSHPALMQLRGGRET----LEDRDWVCGLPSVVDAVARM 272          
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A1H8JS02_9RHOB (Iron complex transport system substrate-binding protein n=1 Tax=Paracoccus alcaliphilus TaxID=34002 RepID=A0A1H8JS02_9RHOB)

HSP 1 Score: 123 bits (309), Expect = 3.970e-31
Identity = 76/191 (39.79%), Postives = 110/191 (57.59%), Query Frame = 0
Query:    1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTAR-PTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLA 190
            +QPDLVL G +T+  A D+LRRL   V  F+   DLD  R   RR+   +G    A+R++   D   +L+R      + P+A +Y  NG+S G  SLA  +L+ AGFRN+A D GI +GGF+PLE LV+A PD V+LD+      + A+ I  HPAL +   +  +  +  +++ W CG   +  AIE LA
Sbjct:   82 MQPDLVLAGRYTSRTAVDMLRRLEVPVEEFDIVSDLDGLRHGIRRMGQVLGREAEAQRIIQGFD--ADLARLGDAEGKDPSAALYSANGYSSGDSSLAGQILLTAGFRNIAADAGIPFGGFLPLELLVLADPDLVVLDSR-NHGASRAEEIYDHPALRQVMAQSPVETV--SDRDWICGTPHVLRAIETLA 267          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DD52_9GAMM1.480e-4556.41Fe/B12 periplasmic-binding domain-containing prote... [more]
A0A2E8PHP2_9RHOB4.060e-3640.84Cobalamin ABC transporter substrate-binding protei... [more]
UPI001430E23B2.140e-3440.10ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A2D9F7Y4_9PROT2.410e-3439.06ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A418SIS3_9RHOB2.880e-3441.67Vitamin B12-binding protein n=1 Tax=Pseudooceanico... [more]
A0A2T0WZ95_9RHOB9.260e-3342.63Iron complex transport system substrate-binding pr... [more]
UPI000478321F2.410e-3240.00ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A168TWA6_9CYAN3.100e-3241.54Fe/B12 periplasmic-binding domain-containing prote... [more]
UPI000CD3295F2.290e-3138.95ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A1H8JS02_9RHOB3.970e-3139.79Iron complex transport system substrate-binding pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002491ABC transporter periplasmic binding domainPFAMPF01497Peripla_BP_2coord: 1..154
e-value: 8.0E-11
score: 41.9
IPR002491ABC transporter periplasmic binding domainPROSITEPS50983FE_B12_PBPcoord: 1..195
score: 10.917
NoneNo IPR availableGENE3D3.40.50.1980coord: 67..193
e-value: 3.2E-8
score: 35.5
NoneNo IPR availableGENE3D3.40.50.1980coord: 1..63
e-value: 3.5E-6
score: 29.0
NoneNo IPR availablePANTHERPTHR30535VITAMIN B12-BINDING PROTEINcoord: 1..192
NoneNo IPR availableSUPERFAMILY53807"Helical backbone" metal receptorcoord: 1..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99055contigM-pyrifera_M_contig99055:102..689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99055.22785.1mRNA_M-pyrifera_M_contig99055.22785.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99055 102..689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99055.22785.1 ID=prot_M-pyrifera_M_contig99055.22785.1|Name=mRNA_M-pyrifera_M_contig99055.22785.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp
LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAI
GASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDM
LVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAI
LIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAAFAAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002491ABC_transptr_periplasmic_BD