mRNA_M-pyrifera_M_contig110814.2277.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A2E9VSY2_9PLAN (SWIM-type domain-containing protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E9VSY2_9PLAN) HSP 1 Score: 246 bits (628), Expect = 2.840e-78 Identity = 117/192 (60.94%), Postives = 146/192 (76.04%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDASVNIEGAQRLESNGLEDIFGIELVDS 576
FWG +WCKH E Y D++NRLPRGRTYARNGSI HLEI SGK+TAMV GS+LY +EI IE + + W LC +CT+SV S +DL++GKLP V+++LT+PK +FPR EI+LDCDCPD A LCKHLAAVLYGVGNRLD +PELLFLLRGV Q LI SL+ D+ + E L+++ L +IF I+L +S
Sbjct: 48 FWGEAWCKHLEKYSDFSNRLPRGRTYARNGSIAHLEITSGKITAMVCGSELYQVEISIEPLAQEIWKILCGECTTSVHSVLDLMRGKLPKNVIQSLTHPKTGMFPRNAEIELDCDCPDGANLCKHLAAVLYGVGNRLDQSPELLFLLRGVQQTDLISSSLNGRVDSLLGNEEVASLDNSDLSEIFRIDLDES 239
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A5C6DZ75_9BACT (SWIM-type domain-containing protein n=1 Tax=Novipirellula artificiosorum TaxID=2528016 RepID=A0A5C6DZ75_9BACT) HSP 1 Score: 234 bits (597), Expect = 1.370e-73 Identity = 108/194 (55.67%), Postives = 143/194 (73.71%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLIS-DASVNIEGAQRLESNGLEDIFGIELVDSA 579
FWG WC H E Y D++NRLPRGRTYARNGSI HL I G+V AMV GS+LY I IKIE M + W +C+ +S+ S IDL++G L V++ LT+PK LFP +EI+++CDCPDWAGLCKHLAAVLYG+G+RLD +PELLF+LRGVDQ L+ SL ++ + ++ ++ +++N LE IFGI+L +SA
Sbjct: 50 FWGKGWCDHLEKYSDFSNRLPRGRTYARNGSIAHLRITKGRVDAMVCGSELYKITIKIEPMDALRWKAICRDSAASIHSVIDLMRGALSDSVMQRLTDPKTGLFPASDEIKMNCDCPDWAGLCKHLAAVLYGIGHRLDHSPELLFVLRGVDQADLVSESLSTVNVNEAMGLDQQSSIDANDLESIFGIDLANSA 243
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A7C1U382_9GAMM (Helix-turn-helix domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1U382_9GAMM) HSP 1 Score: 224 bits (570), Expect = 2.590e-69 Identity = 103/189 (54.50%), Postives = 135/189 (71.43%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDASVNIEGAQRLESNGLEDIFGIEL 567
FWG +WC H E + DY NRLPRGRTY RNGS+ HL I GK+ A+V+GS+LY+I I I +P++ W ++ +C + S ++LLQG+ V+E +T+P N LFP+ EI+L CDCPDWAG+CKHLAAVLYGVG RLD PELLFLLR VDQ L+ LD+ S AS +G +RL S L D+FG+++
Sbjct: 50 FWGEAWCDHLEKFSDYENRLPRGRTYVRNGSVCHLAISKGKIEAIVSGSELYNINIDIAPLPARKWKKVRDQCAGRIGSILELLQGRFSDNVMEIVTDPNNGLFPQPREIKLTCDCPDWAGMCKHLAAVLYGVGARLDHQPELLFLLRNVDQEALVSTELDVTSAASG--KGKRRLASTDLSDLFGVDM 236
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A5C6A4N9_9BACT (SWIM-type domain-containing protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6A4N9_9BACT) HSP 1 Score: 221 bits (564), Expect = 6.910e-69 Identity = 104/193 (53.89%), Postives = 137/193 (70.98%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDASVNIEGAQRLESNGLEDIFGIELVDSA 579
FWG +WC+HFE YRD++NRLPRG+TYARNGS+ HLEI GK+ +V GS+LY + I+I+ +P+K W + K C SV S IDL++GKL V+ LTNPK+ LFP E+ L CDCPD++ LCKHLAAV+YGV RLD PELLF+LRGVDQ+ LI ++ ++ + +E A E + L IFGIE+ A
Sbjct: 48 FWGQAWCEHFEGYRDFSNRLPRGKTYARNGSVCHLEITPGKIFGLVCGSELYDVNIQIDALPAKKWKAIRKDCQHSVLSLIDLMRGKLSEEVIARLTNPKDGLFPIGKEMSLSCDCPDYSRLCKHLAAVMYGVAARLDSQPELLFVLRGVDQSELIADAIST-QESDLGLEAASDFEGDDLGAIFGIEMASPA 239
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A1E4ZP21_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium (ex Bugula neritina AB1) TaxID=1868282 RepID=A0A1E4ZP21_9GAMM) HSP 1 Score: 222 bits (566), Expect = 9.540e-69 Identity = 107/189 (56.61%), Postives = 134/189 (70.90%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDASVNIEGAQRLESNGLEDIFGIEL 567
FWG +WC+H E + DYANRLPRGRTYARNGS++HLEI +GK+TAMV+G+ YHI I I+ +P K W L +C + S ++LLQGKL +++T+ + N LFP EI LDCDCPDWA LCKHLAAV+YG+G RLD++PELLF LRGVD LIG L I +S + E L+S IFGIEL
Sbjct: 49 FWGKAWCQHLEKFSDYANRLPRGRTYARNGSVIHLEIDTGKITAMVSGTSTYHINITIKPLPRKKWNALKSQCAGGIDSVLELLQGKLSNSIMQTMCDRDNGLFPSPKEISLDCDCPDWAALCKHLAAVMYGIGARLDESPELLFQLRGVDYQELIGAEL-AIDTSSTDTELGGDLDS-----IFGIEL 231
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A5C6BDD0_9BACT (SWIM-type domain-containing protein n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6BDD0_9BACT) HSP 1 Score: 220 bits (560), Expect = 7.870e-68 Identity = 106/196 (54.08%), Postives = 135/196 (68.88%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDAS-VNIEGAQRLESNGLEDIFGIELVDSANS 585
FWG SWC H E Y DY+NRLPRGRTYARNGS+ L I G++TAMV GS LY I IKI + W +C+ C++S+ S IDL++GKL V+ +T+PK +FP NEI+++C+CPD A LCKHLAA LYGVGNRLD APELLFLLRGVDQN LI +++ + S + ++ L L +FGIEL A +
Sbjct: 48 FWGKSWCTHLEKYSDYSNRLPRGRTYARNGSVADLRITRGQITAMVCGSSLYDITIKITPLADTDWKAICRDCSASIHSLIDLMRGKLGDDVIRRMTDPKRGMFPAGNEIEMNCNCPDGASLCKHLAAALYGVGNRLDTAPELLFLLRGVDQNELISQAMVAENATSAMGLDSDSELAGEDLGAMFGIELASPAQT 243
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A2S0L194_9BACT (SWIM-type domain-containing protein n=3 Tax=Lentisphaeria TaxID=1313211 RepID=A0A2S0L194_9BACT) HSP 1 Score: 215 bits (547), Expect = 1.720e-67 Identity = 101/189 (53.44%), Postives = 138/189 (73.02%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDASVNIEGAQRLESNGLEDIFGIEL 567
FWG +WC++ ESY+DY +RLPRGR+Y RNG+++ L+IL GKVTA+V+GS+LYH+EI+I+ + + WA+L K+C + S +DL++GKL P++E L + + LFP +EI L+CDCPDWA LCKHLAAVLYG+G RLDD P L F+LRGVDQ+ L D N+ GA ++ + L D FGIEL
Sbjct: 48 FWGKAWCRNIESYQDYESRLPRGRSYLRNGTVIDLKILPGKVTALVSGSELYHVEIRIDPVAPERWAQLRKQCFGKIGSLVDLVEGKLSDPIVELLCDRDSGLFPEPDEIHLNCDCPDWADLCKHLAAVLYGIGARLDDDPALFFVLRGVDQSELFS------GDLGENLPGAA-VDLDDLADTFGIEL 229
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: M5SW91_9BACT (Zinc finger SWIM domain-containing protein n=3 Tax=Rhodopirellula TaxID=265488 RepID=M5SW91_9BACT) HSP 1 Score: 219 bits (558), Expect = 2.030e-67 Identity = 104/192 (54.17%), Postives = 137/192 (71.35%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDAS-VNIEGAQRLESNGLEDIFGIELVD 573
FWG +WC H E Y D++NRLPRGRTYARNGSI L+I GK+T+MV GS LY I+IKI+ +P+ W+ +C+ C+SS+ S +DL++G+L V+ +T+PK+ LFP NEI L C CPD A LCKHLAA LYGVG+RLD +PELLFLLR VDQN LI +++ +S + ++ L L IFGIE+ D
Sbjct: 48 FWGKNWCTHLEKYSDFSNRLPRGRTYARNGSIADLQISKGKITSMVCGSYLYEIKIKIDPLPASKWSAICRSCSSSIHSIMDLMRGRLGDDVIRHITDPKSGLFPATNEISLRCSCPDGAYLCKHLAATLYGVGHRLDSSPELLFLLRAVDQNELISQAMSAEGASSAMGLDETSELGDEDLGAIFGIEMAD 239
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A550JHL4_9DELT (SWIM-type domain-containing protein n=1 Tax=Desulfuromonas acetexigens TaxID=38815 RepID=A0A550JHL4_9DELT) HSP 1 Score: 217 bits (553), Expect = 1.060e-66 Identity = 100/197 (50.76%), Postives = 141/197 (71.57%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDASVNIEGAQRLESNGLEDIFGIELVDSANSKD 591
FWG WC+ ES+ DYANRLPRGR+Y RNGS+ HLEI +G++TA+V+G+ LY++ I IE + + TW + C+ + S +DLL+GKL V+E +T+ K LFP E++ DCDCPDWAG+CKH+AAVLYGVG RLD +PE+LF+LRGV+ LI + ++DA+ +R+ + GL D+FGIEL D+ ++D
Sbjct: 47 FWGKGWCEQMESFSDYANRLPRGRSYVRNGSVCHLEIAAGRITALVSGTTLYNVVITIEPLKASTWEVVKGACSGKIASLVDLLRGKLDDSVMEVVTDRKKGLFPLPGEMKFDCDCPDWAGMCKHVAAVLYGVGARLDQSPEMLFVLRGVNHQELIDVTA-AVADATRAGSSRRRIAATGLADVFGIELADTGVAED 242
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Match: A0A847GQ13_9BACT (SWIM-type domain-containing protein n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GQ13_9BACT) HSP 1 Score: 215 bits (547), Expect = 1.140e-66 Identity = 101/189 (53.44%), Postives = 131/189 (69.31%), Query Frame = 1
Query: 1 FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDLYHIEIKIEQMPSKTWARLCKKCTSSVTSTIDLLQGKLPAPVLETLTNPKNDLFPRKNEIQLDCDCPDWAGLCKHLAAVLYGVGNRLDDAPELLFLLRGVDQNGLIGRSLDLISDASVNIEGAQRLESNGLEDIFGIEL 567
FWG +WC H ES+ DYANRLPRGRTY RNGS+ HLEI G+V A V GS+LY++ I+I+ +P+K W+ + ++C V S ++LLQGKL V++ +T+ + LFP EI L CDCPDWA +CKH+AAVLYGVG RLD PELLF LRGVD LI + A+ + A+RL L D+FGI+L
Sbjct: 49 FWGEAWCDHLESFSDYANRLPRGRTYVRNGSVCHLEINRGEVLAKVMGSELYNLRIQIKTLPAKKWSAIKERCAGQVGSLLELLQGKLSDHVMQVVTDRQEGLFPAPGEISLKCDCPDWAVMCKHVAAVLYGVGARLDQQPELLFKLRGVDHEELIAADAEAAVSAATSRGKAKRLSGGELSDVFGIDL 237 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110814.2277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110814.2277.1 >prot_M-pyrifera_M_contig110814.2277.1 ID=prot_M-pyrifera_M_contig110814.2277.1|Name=mRNA_M-pyrifera_M_contig110814.2277.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp FWGTSWCKHFESYRDYANRLPRGRTYARNGSIVHLEILSGKVTAMVAGSDback to top mRNA from alignment at M-pyrifera_M_contig110814:3..593+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110814.2277.1 ID=mRNA_M-pyrifera_M_contig110814.2277.1|Name=mRNA_M-pyrifera_M_contig110814.2277.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig110814:3..593+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110814:3..593+ >mRNA_M-pyrifera_M_contig110814.2277.1 ID=mRNA_M-pyrifera_M_contig110814.2277.1|Name=mRNA_M-pyrifera_M_contig110814.2277.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig110814:3..593+ (Macrocystis pyrifera P11B4 male)back to top |