mRNA_M-pyrifera_M_contig98417.22666.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A5A8C4A6_CAFRO (Dihydroorotase n=6 Tax=Sar TaxID=2698737 RepID=A0A5A8C4A6_CAFRO) HSP 1 Score: 249 bits (637), Expect = 4.470e-79 Identity = 131/213 (61.50%), Postives = 155/213 (72.77%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPWT 639 GEVT+ +VDVF RE AFV L ++ P LR+++EH+TTRAA EFV S G NVAATITPQHLLFNRN LF GGLRPH+YCLP+LK EDDRAAL++A+R S KFFLGTDSAPH RG KES CGCAG++S+ T LE+YA+AFER G D FA ++GA FYK+ N VT+ RK + VP EL FGE VVVP LAG +PWT Sbjct: 146 GEVTDPSVDVFEREAAFVSERLPLVLAAAPGLRIVLEHITTRAAAEFVASAGPNVAATITPQHLLFNRNELFRGGLRPHMYCLPILKTEDDRAALIDAVRSGSPKFFLGTDSAPHARGRKESDCGCAGIYSAHTALEAYALAFERAGCI-DRLPAFASQHGADFYKVSRNT---AEVTVSRKARTVPAELSFGEDC---VVVPFLAGQELPWT 351
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A3M1UHF5_9GAMM (Dihydroorotase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1UHF5_9GAMM) HSP 1 Score: 239 bits (611), Expect = 4.100e-75 Identity = 128/212 (60.38%), Postives = 148/212 (69.81%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPW 636 GEVT+ VDVF RE F++ L ++ER PDL++++EHVTTR V FVR GD VAAT+TPQHLLFNRNALF GGLRPH YCLPVLK+E R ALLEA S +FFLGTDSAPH R KES CGCAGVFS+P LE YA+AFE+ G A + E FA YG FY LP N TV L+R+ VPE PFG+ VVPL AG T+PW Sbjct: 136 GEVTDPDVDVFDREAVFIERELKPLLERHPDLKLVLEHVTTREGVAFVRESGDRVAATLTPQHLLFNRNALFAGGLRPHHYCLPVLKREHHREALLEAATSGSPQFFLGTDSAPHARPAKESACGCAGVFSAPLALECYALAFEQAG-ALERLEGFASHYGPDFYGLPRNPT---TVELERREWTVPESYPFGDSR----VVPLFAGETLPW 339
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A2W4RTT3_9PROT (Dihydroorotase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RTT3_9PROT) HSP 1 Score: 238 bits (608), Expect = 8.170e-75 Identity = 125/212 (58.96%), Postives = 151/212 (71.23%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPW 636 GEVT R VDVF RE F+D VLA + R+P+LR++ EHVTT AAVEFV+S+ V ATITPQHLL NRN LF GG+RPH YCLPVLK+E DR ALLEA+ +FFLGTDSAPH RG KE+ CGCAG+FS+P LE YA AFE+ G A E FA E+G +F+ LPLN+ GTVTL+RK VP + P+ + V+VPL AG + W Sbjct: 138 GEVTRREVDVFEREARFIDEVLAPLRARLPELRIVFEHVTTAAAVEFVKSQPSGVGATITPQHLLMNRNDLFQGGIRPHHYCLPVLKRERDRVALLEAVAGGDPRFFLGTDSAPHARGAKEAACGCAGIFSAPLALELYAEAFEQAG-ALHRLEAFASEFGPRFHGLPLNE---GTVTLERKEWTVPPQYPYADT----VIVPLRAGEKLRW 341
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A7V5MRK0_9GAMM (Dihydroorotase n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7V5MRK0_9GAMM) HSP 1 Score: 233 bits (595), Expect = 6.510e-74 Identity = 123/212 (58.02%), Postives = 144/212 (67.92%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPW 636 GEVT+ VDVF RE F++ L +++ PDLR+++EHVTTR V FVR GD VA T+TPQHLLFNRNALF GGLRPH YCLPVLK+E R ALLEA KFFLGTDSAPH R KES CGCAG+FS+P LE YA+ FE G A D E FA +G +Y LP N GT+TL R+ VPEE PFG+ +VPL AG +PW Sbjct: 59 GEVTDPDVDVFDREAVFIERELKPLLDHHPDLRLVLEHVTTREGVRFVREAGDRVAGTLTPQHLLFNRNALFAGGLRPHHYCLPVLKRECHREALLEAATSGDPKFFLGTDSAPHARSAKESACGCAGIFSAPLALECYALVFEHAG-ALDRLEAFASHHGPDYYGLPRNS---GTLTLVREAWTVPEEYPFGKDR----IVPLFAGEQMPW 262
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A7S0X288_9CHLO (Dihydroorotase n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X288_9CHLO) HSP 1 Score: 238 bits (606), Expect = 1.380e-73 Identity = 123/212 (58.02%), Postives = 151/212 (71.23%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPW 636 GEVT+ VD+F RE+ F+ VLA ++ VP+L+V++EH+TT+ AVEF R++ NVAATITPQH+L NRN + GG+RPHLYCLP+LK+E RAA+LEA + KFFLGTDSAPHPRG KES CGCAGVFS+ L YA+AFE+EG D E FA +GA FY +P N +GTVTL+R P VP E FG VVVP AG IPW Sbjct: 214 GEVTHGRVDIFDRERVFLQEVLAGLIAAVPELKVVMEHITTQEAVEFCRAQSSNVAATITPQHVLLNRNDMLIGGIRPHLYCLPILKRESHRAAVLEAATSGNPKFFLGTDSAPHPRGAKESACGCAGVFSAHAALPFYAMAFEKEGKL-DQLEAFASFHGADFYGVPRN---QGTVTLERSPWTVPSEYAFG----GDVVVPFFAGQEIPW 417
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A3D3S1L3_9GAMM (Dihydroorotase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D3S1L3_9GAMM) HSP 1 Score: 233 bits (595), Expect = 6.650e-73 Identity = 124/212 (58.49%), Postives = 148/212 (69.81%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPW 636 GEVT+ AVDVF RE F++ LA +V R P LRV++EH+TTR V FVR+ VAATITPQHL NR ALF+GGLRPH YCLPVLK+E+ RAA+L A KFFLGTDSAPHPRG K S CGCAG++S+ +E YA AFE+ G A D E FA +GA FY+LP N GT+TL+R PQ VPE LPFG+ +VPL AG + W Sbjct: 136 GEVTDPAVDVFDREAVFIERHLAPLVARFPGLRVVLEHITTREGVAFVRAARPGVAATITPQHLSMNRGALFEGGLRPHHYCLPVLKREEHRAAVLAAALSGDPKFFLGTDSAPHPRGDKHSACGCAGIYSAHAGIELYAEAFEQAG-ALDRLEAFASHHGADFYRLPRNT---GTLTLRRAPQAVPESLPFGDDR----LVPLRAGGQLAW 339
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A4S6P4_OSTLU (Dihydroorotase n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S6P4_OSTLU) HSP 1 Score: 234 bits (597), Expect = 1.020e-72 Identity = 121/213 (56.81%), Postives = 150/213 (70.42%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPWT 639 GEVT+ +VDVF RE F+ VL +++R PDLRV++EH+TTR A EFV + G NVAA++TPQH+LFNRNALF GGLRPH YCLP+LK+E+ R A+L A SGKFFLGTDSAPHP+G KE+ CGCAG+FS+ L YA+AFE A D E FA GA FY++P N TVTL++K VP+E FG+ VVP AG IPW+ Sbjct: 176 GEVTHASVDVFDREARFIQDVLMPLLDRSPDLRVVMEHITTRDAAEFVAAAGPNVAASVTPQHVLFNRNALFKGGLRPHFYCLPILKREEHREAVLAAATSGSGKFFLGTDSAPHPKGAKEAACGCAGIFSAHAALPLYAMAFESVD-ALDKLEAFASHNGADFYRVPRNTE---TVTLEKKAWKVPDEYKFGDT----TVVPFYAGEEIPWS 380
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A0S8BEJ6_9PROT (Dihydroorotase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BEJ6_9PROT) HSP 1 Score: 232 bits (592), Expect = 1.890e-72 Identity = 123/212 (58.02%), Postives = 152/212 (71.70%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPW 636 GEVT+ A+DVF RE+AF+D VL +VER P+L+V++EH+TTR AV++V G +AATIT HLL NRNALF GG+RPH YCLPVLK+E+ R AL+EA + KFFLGTDSAPH R KE+ CGCAG++++ LE YAIAFE G A D E FA YG +FY LP+N+ S VTL R+P VPE L FG GE +VPL AG +PW Sbjct: 137 GEVTDPAIDVFDRERAFIDDVLGPLVERFPNLKVVLEHITTRDAVQYVEVTGAQIAATITAHHLLMNRNALFLGGIRPHHYCLPVLKREEHREALVEAATSGNPKFFLGTDSAPHARDTKETGCGCAGIYTAHAALELYAIAFEEAG-ALDKLEGFASLYGPQFYGLPVNEDS---VTLVREPWDVPERLAFGAGE----LVPLRAGERLPW 340
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: UPI00198AAD10 (Dihydroorotase n=2 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI00198AAD10) HSP 1 Score: 232 bits (591), Expect = 2.670e-72 Identity = 131/212 (61.79%), Postives = 152/212 (71.70%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPW 636 GEVT+ AVDVF REKAFVD VL IVER L+V++EHVTTR AV++V G NVAATITPQHLL NRNALF GG+RPH YCLPVLK+E+ R AL+EA + KFFLGTDSAPH R KE+ CGCAGV+S+ +E YA AFE G A D E FA +GA FY LP N + T+TL RK +VP+ L FG GE +VPL AG TIPW Sbjct: 137 GEVTDPAVDVFDREKAFVDEVLGPIVERFSGLKVVLEHVTTRDAVQYVEVTGPNVAATITPQHLLLNRNALFLGGMRPHHYCLPVLKREEHREALVEAAISGNPKFFLGTDSAPHSRITKEAACGCAGVYSAHAGIELYATAFEEAG-ALDRLEGFASHFGADFYGLPRN---QDTITLLRKEWLVPKTLRFG-GED---LVPLRAGETIPW 340
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Match: A0A454XZ77_OSTTA (Dihydroorotase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XZ77_OSTTA) HSP 1 Score: 232 bits (592), Expect = 5.800e-72 Identity = 123/216 (56.94%), Postives = 146/216 (67.59%), Query Frame = 1 Query: 1 GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSKGDNVAATITPQHLLFNRNALFDGGLRPHLYCLPVLKKEDDRAALLEAIRDDSGKFFLGTDSAPHPRGGKESPCGCAGVFSSPTFLESYAIAFEREGIAPDVFERFACEYGAKFYKLPLNDPSKGTVTLQRKPQVVPEELPFGEGEGAPVVVPLLAGATIPWTASL 648 GEVT+ VDVF RE F+ VL +++ P+LRV++EH+TTR A EFV + DNV ATITPQH+LFNRNALF GGLRPH YCLPVLK+E+ R A L A S KFFLGTDSAPHPRG KES CGCAG+FS+ L YA+AFE A D E FA GA FY++P N VTL +KP +VP E FG+ +VVP AG IPWT + Sbjct: 175 GEVTHADVDVFDREAKFIKEVLIPLLDSAPELRVVMEHITTRQAAEFVAAAPDNVGATITPQHILFNRNALFKGGLRPHFYCLPVLKREEHREACLAAATSGSKKFFLGTDSAPHPRGAKESACGCAGIFSAHAALPLYAMAFESVS-ALDKLEAFASHNGADFYRVPRNTEK---VTLVKKPWMVPNEYNFGDT----IVVPFYAGEEIPWTVEM 382 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98417.22666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98417.22666.1 >prot_M-pyrifera_M_contig98417.22666.1 ID=prot_M-pyrifera_M_contig98417.22666.1|Name=mRNA_M-pyrifera_M_contig98417.22666.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp GEVTNRAVDVFAREKAFVDGVLAEIVERVPDLRVIVEHVTTRAAVEFVRSback to top mRNA from alignment at M-pyrifera_M_contig98417:3..656+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98417.22666.1 ID=mRNA_M-pyrifera_M_contig98417.22666.1|Name=mRNA_M-pyrifera_M_contig98417.22666.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig98417:3..656+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98417:3..656+ >mRNA_M-pyrifera_M_contig98417.22666.1 ID=mRNA_M-pyrifera_M_contig98417.22666.1|Name=mRNA_M-pyrifera_M_contig98417.22666.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig98417:3..656+ (Macrocystis pyrifera P11B4 male)back to top |