mRNA_M-pyrifera_M_contig110770.2264.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A7S2V3U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3U6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 8.150e-20 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 46 VDQPRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFK-----------VRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
V + V + R V P+ CP+T G+E+E+DFD++ + EA+WE K + LG TEP+ YA G N+ F+V V++SG++P ALT+ GLL+A
Sbjct: 28 VGEDMVVVNRIEVGPSACPVTDGLELEVDFDIDREAQEAQWEIKLIVDSSHTRHIIILGSTEPDDYAEGPNNFYFSVPSVNISGVKPGALTSAGLLVA 125
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A7S2WJA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJA3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.650e-16 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 55 PRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFK-----------VRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
P V++ R ++PN CP+ + +E+DF + +PEA+W K V LG T+ E Y G NS F V +D+SGIRP AL NCGLL A
Sbjct: 56 PTVDVTRVEIAPNECPVCDPLTLEMDFLLSQGLPEAQWVVKFLVDSAQERHVVDLGATDVEDYRAGPNSFLFEVPTIDISGIRPGALANCGLLTA 150
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: W2H555_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2H555_PHYPR) HSP 1 Score: 72.0 bits (175), Expect = 7.310e-14 Identity = 39/113 (34.51%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 1 MSEGKYGDDGGDAGGVDQPRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFK-----------VRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
MSE K+ +D + +P V++ +SPN LT + +E+DF ++ V W+ + ++LG+ E +YA G N +F+ +++SGI+PS LTNCGLLIA
Sbjct: 1 MSESKHQEDSLRS----RPTVDVTAVDISPNPAALTDELNLEVDFHLDVPVTNGVWDIEYLVDSVTKRHIIKLGQVEATNYARGDNHFQFSTSQINISGIQPSQLTNCGLLIA 109
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A067CNI8_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CNI8_SAPPC) HSP 1 Score: 70.5 bits (171), Expect = 3.110e-13 Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 55 PRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFK-----------VRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
P+V++ R +SPN ++ + +E+DF V V + WE + ++LG+T+ Y G N +F+V +DVSGI+PS L NCGLL A
Sbjct: 17 PKVDVLRVDISPNPTHISDELNLEVDFSVSKTVRQGYWEVQYLVDSVLRRHIIKLGRTDATDYTRGENHFQFSVSHIDVSGIKPSNLANCGLLSA 111
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A3M6VAU3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAU3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.460e-11 Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 1
Query: 61 VELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFKVRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
V + VSPN L A + +E++F +E + W +V L T+ YA G N +F+ V++SG++PS LTNCGLLIA
Sbjct: 21 VSITAVKVSPNPAALAAELNLEVNFHLEAPIANGVWNIEVGLKATD---YARGDNRFQFSTPQVNISGLQPSQLTNCGLLIA 99
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A6A3JJJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JJJ8_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.630e-9 Identity = 31/102 (30.39%), Postives = 49/102 (48.04%), Query Frame = 1
Query: 52 QPRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFKVRLGKTEPE-----------------SYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
+P VE+ +SPN LT + +E+DF ++ V W+ + + YA G N +F+ +++SGI+PS LTNCGLL+A
Sbjct: 16 RPTVEVTAVDISPNPATLTDELNLEVDFHLDAPVTNGVWDIEYLVDSVTKRHIINILFRYLVILHYATDYARGDNHFQFSAPQINISGIQPSQLTNCGLLVA 117
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A833STT0_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833STT0_PHYIN) HSP 1 Score: 53.1 bits (126), Expect = 2.600e-6 Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 181 RLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
+LG+ E +YAPG N +F+ +++SGI+PS LTNCGLLIA
Sbjct: 108 QLGQVEATNYAPGDNHFQFSTPQINISGIQPSQLTNCGLLIA 149
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A0W8D785_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D785_PHYNI) HSP 1 Score: 50.1 bits (118), Expect = 1.210e-5 Identity = 31/102 (30.39%), Postives = 49/102 (48.04%), Query Frame = 1
Query: 1 MSEGKYGDDGGDAGGVDQPRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFKVRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
MSE K+ +D + +P V++ +SPN LT + +E+DF ++ V W+ + +++SGI+PS LTNCGLLIA
Sbjct: 1 MSESKHQEDSLRS----RPTVDVTAVDISPNPAALTDELNLEVDFHLDVPVTNGVWDXETSQ---------------------INISGIQPSQLTNCGLLIA 77
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: A0A3R7HPB3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HPB3_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 3.850e-5 Identity = 27/85 (31.76%), Postives = 42/85 (49.41%), Query Frame = 1
Query: 52 QPRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFKVRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
+P VE+ +SPN LT + +E+DF ++ V W+ + P+ +++SGI+PS LTNCGLL A
Sbjct: 21 RPTVEVTAVDISPNPAALTDELNLEVDFHLDTPVTNGVWDIET------PQ---------------INISGIQPSQLTNCGLLTA 84
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Match: H3GZJ0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZJ0_PHYRM) HSP 1 Score: 48.5 bits (114), Expect = 6.950e-5 Identity = 25/85 (29.41%), Postives = 40/85 (47.06%), Query Frame = 1
Query: 52 QPRVELRRASVSPNRCPLTAGMEIELDFDVECKVPEAEWEFKVRLGKTEPESYAPGGNSVRFAVDGVDVSGIRPSALTNCGLLIA 306
+P V++ +SPN LT + +E+DF ++ V W+ + + F +++ GI PS L NCGLLIA
Sbjct: 16 RPTVDVTAVDISPNPAALTDELHLEVDFHLDAPVTNGVWDVEYLVDSVTKRHII--NILSTFCTPQINILGIEPSQLANCGLLIA 98 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110770.2264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110770.2264.1 >prot_M-pyrifera_M_contig110770.2264.1 ID=prot_M-pyrifera_M_contig110770.2264.1|Name=mRNA_M-pyrifera_M_contig110770.2264.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp MSEGKYGDDGGDAGGVDQPRVELRRASVSPNRCPLTAGMEIELDFDVECKback to top mRNA from alignment at M-pyrifera_M_contig110770:3..504- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110770.2264.1 ID=mRNA_M-pyrifera_M_contig110770.2264.1|Name=mRNA_M-pyrifera_M_contig110770.2264.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=502bp|location=Sequence derived from alignment at M-pyrifera_M_contig110770:3..504- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110770:3..504- >mRNA_M-pyrifera_M_contig110770.2264.1 ID=mRNA_M-pyrifera_M_contig110770.2264.1|Name=mRNA_M-pyrifera_M_contig110770.2264.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig110770:3..504- (Macrocystis pyrifera P11B4 male)back to top |