mRNA_M-pyrifera_M_contig98106.22594.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98106.22594.1
Unique NamemRNA_M-pyrifera_M_contig98106.22594.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: A0A0L0HLY1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HLY1_SPIPD)

HSP 1 Score: 75.5 bits (184), Expect = 3.140e-14
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 1
Query:   22 KESEEEVEGAMDTLLELKGVGPATASALLAAAHPSIPFMADEALSAIGPR-EYTKKAFLGLLKATRAKSAVLG-----DSFPASRIADALWAHDVSKRV----VGLKRSHGGSAG 336
            KES+E +  A+  L +LKGVGPATASALL+A +PSIPFM+DEALS    + +YT  A+  LL+  RA++A L      D++ A +   A+WA  + KR     +G  + +G   G
Sbjct:   61 KESDESIIAALKELAKLKGVGPATASALLSAYNPSIPFMSDEALSLYSAKLQYTVPAYKNLLEKLRAQAAELNKREGSDNWTAGKCERAVWAWCIGKRFGLTEMGEDKGNGNDTG 175          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: A0A507E591_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507E591_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 1.540e-13
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1
Query:   22 KESEEEVEGAMDTLLELKGVGPATASALLAAAHPSIPFMADEALSAIGPR-EYTKKAFLGLLKATRAKSAVLG-----DSFPASRIADALWAHDVSKR 297
            KES+E +  A+  L +LKGVGPATASALL+A +PSIPFM+DEALS    + +YT  A+  LL   RA++A L      D++ A +   A+WA  + KR
Sbjct:  102 KESDESILAALKELAKLKGVGPATASALLSAYNPSIPFMSDEALSLYSAKLQYTVPAYKNLLAKLRAQAAELNKGEGSDNWTAGKCERAVWAWCIGKR 199          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: A0A7S2UUL7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUL7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.620e-12
Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 1
Query:   19 GKESEEEVEGAMDTLLELKGVGPATASALLAAAHPS-IPFMADEALSAI-GPREYTKKAFLGLLKATRAKSAVLGDSFPASRIADALWAHDVSKRV 300
            G + + EV  A+  L +L+GVGPATASA+LAA  P   PFM+DEAL A+ G REYT  A++ L      K+  LG S+ A ++  A+W   VSK +
Sbjct:  116 GTKHKPEVAEAVKELSKLRGVGPATASAVLAAYCPEECPFMSDEALEAVNGKREYTLSAYISLRDGLCEKATNLGPSWTAEKVGKAMWVDAVSKTI 211          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: T0RRD9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRD9_SAPDV)

HSP 1 Score: 69.3 bits (168), Expect = 6.410e-12
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   40 VEGAMDTLLELKGVGPATASALLAAAHPSIPFMADEALSA----IGPREYTKKAFLGLLKATRAKSAVLGDSFPASRIADALWAHDVSKRVVGLKRSHGGSAGGGGKRVK 357
            V  A+  + ELKGVGPATASA+LAA   S+ FM DEAL+A    IG R+YT   F+   +A RA++ VLG ++    + +ALW    +      ++    +A G  K+ K
Sbjct:  102 VREAVAAISELKGVGPATASAVLAAYSRSVAFMGDEALNAMTKAIGARQYTLPHFVRFTEALRARATVLGGAWTPQALQEALWLEATASEATPKRKRSPAAATGSKKKTK 211          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: A0A1V9ZJT2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJT2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.210e-11
Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   49 AMDTLLELKGVGPATASALLAAAHPSIPFMADEALSA----IGPREYTKKAFLGLLKATRAKSAVLGDSFPASRIADALW 276
            A+  + ELKGVGPATASA+LAA   S+PFM DEAL+A    IG R+YT   FL    A R +++VLG S+ A  +   LW
Sbjct:  105 AIAAISELKGVGPATASAVLAAFDSSVPFMGDEALNALAKTIGARQYTLPHFLRFATALRERASVLGASWTAQAVQRTLW 184          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: L1IJ15_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IJ15_GUITC)

HSP 1 Score: 67.4 bits (163), Expect = 3.220e-11
Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 1
Query:    1 LGGSVVGKESEEEVEGAMDTLLELKGVGPATASALLAAAHPS-IPFMADEALSAIG-PREYTKKAFLGLLKATRAKSAVLGDSFPASRIADALWA 279
            LG S   K++  +++  M+ L ELKG+GPATASALLA   P   PFM+DEAL   G  REYT   +L   +A  +K+  LG  + A  +  A+WA
Sbjct:   79 LGDSAGNKKNVTKLKDVMNKLCELKGIGPATASALLAHIDPERFPFMSDEALEGCGMKREYTLATYLSFAEALSSKAKALGGEWNAETVGRAMWA 173          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: A0A8C5WK64_9ANUR (Uncharacterized protein n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5WK64_9ANUR)

HSP 1 Score: 67.0 bits (162), Expect = 5.480e-11
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 1
Query:   40 VEGAMDTLLELKGVGPATASALLAAAHPSIP-FMADEALSAIG---PREYTKKAFLGLLKATRAKSAVL----GDSFPASRIADALWAHDVSKRV 300
            V  A+D L +LKG+GPATASA+LAA  P +  FMADEA+ +I    P +YT K +L  L+A R K+A L    GD++   R+   LWA  V++++
Sbjct:  107 VSAALDELCQLKGIGPATASAVLAAGAPELTAFMADEAVESIPGLTPVQYTSKHYLRFLEALRQKAATLSKASGDTWSPHRLELCLWAWKVAQKL 201          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: G5AIE0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AIE0_PHYSP)

HSP 1 Score: 65.5 bits (158), Expect = 1.480e-10
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query:   37 EVEGAMDTLLELKGVGPATASALLAAAHPSIPFMADEALSAI----GPREYTKKAFLGLLKATRAKSAVLGDSFPAS 255
            ++  A + L  LKGVGPATASA+LAA   S+PFMADEAL AI    GPR+YT   FL   +  RAK+  L +  PA+
Sbjct:  105 DLRAATEELCALKGVGPATASAVLAAYDESVPFMADEALEAIAGIIGPRKYTLPHFLSFAEQLRAKAKWLNEQRPAN 181          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: A0A3M6VQ98_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ98_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.200e-10
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 1
Query:   37 EVEGAMDTLLELKGVGPATASALLAAAHPSIPFMADEALSAI----GPREYTKKAFLGLLKATRAKSAVLGDSFPAS 255
            ++  A D L  LKGVGPATASA+LAA   S+PFMADEAL AI    GPR+YT   FL  + A RAK+  L +   A+
Sbjct:  103 DLRSATDALCVLKGVGPATASAVLAAYDESVPFMADEALEAIAGIIGPRKYTLPHFLSFVDALRAKTRWLNEQRAAN 179          
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Match: F2UGA8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UGA8_SALR5)

HSP 1 Score: 65.1 bits (157), Expect = 5.070e-10
Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 1
Query:   40 VEGAMDTLLELKGVGPATASALLAAAHPSIPFMADEALSAIG---PREYTKKAFLGLLKATRAKSAVLGDSFPASRIADALWA 279
            VE A++ L +LKGVGPATASA+LA   P  PFM+DEA+ AI    P +Y  + +L  +K  +AK+  LG+ +   R+  ALWA
Sbjct:  191 VEKAINHLTKLKGVGPATASAVLAPLDPRAPFMSDEAMLAIPSCQPIDYKLRNYLHFVKHIQAKAKELGNGWTCERVGRALWA 273          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98106.22594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0HLY1_SPIPD3.140e-1443.48Uncharacterized protein n=2 Tax=Spizellomyces punc... [more]
A0A507E591_9FUNG1.540e-1347.96Uncharacterized protein n=1 Tax=Spizellomyces sp. ... [more]
A0A7S2UUL7_9STRA5.620e-1245.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
T0RRD9_SAPDV6.410e-1240.00Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9ZJT2_9STRA1.210e-1151.25Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
L1IJ15_GUITC3.220e-1144.21Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A8C5WK64_9ANUR5.480e-1145.26Uncharacterized protein n=1 Tax=Leptobrachium leis... [more]
G5AIE0_PHYSP1.480e-1051.95Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A3M6VQ98_9STRA2.200e-1053.25Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
F2UGA8_SALR55.070e-1046.99Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98106contigM-pyrifera_M_contig98106:324..692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score77.0
Seed ortholog evalue6.7e-12
Seed eggNOG ortholog109760.SPPG_02432T1
Hectar predicted targeting categoryother localisation
EggNOG OGs28ITR@1,2QR55@2759,39PFD@33154,3Q3GS@4751
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons1
Model size369
Cds size369
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816898.6020038-CDS-M-pyrifera_M_contig98106:323..6921622816898.6020038-CDS-M-pyrifera_M_contig98106:323..692Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98106 324..692 -
1692278243.636814-CDS-M-pyrifera_M_contig98106:323..6921692278243.636814-CDS-M-pyrifera_M_contig98106:323..692Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98106 324..692 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98106.22594.1prot_M-pyrifera_M_contig98106.22594.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98106 324..692 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98106.22594.1

>prot_M-pyrifera_M_contig98106.22594.1 ID=prot_M-pyrifera_M_contig98106.22594.1|Name=mRNA_M-pyrifera_M_contig98106.22594.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
LGGSVVGKESEEEVEGAMDTLLELKGVGPATASALLAAAHPSIPFMADEA
LSAIGPREYTKKAFLGLLKATRAKSAVLGDSFPASRIADALWAHDVSKRV
VGLKRSHGGSAGGGGKRVKGEE*
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mRNA from alignment at M-pyrifera_M_contig98106:324..692-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98106.22594.1 ID=mRNA_M-pyrifera_M_contig98106.22594.1|Name=mRNA_M-pyrifera_M_contig98106.22594.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig98106:324..692- (Macrocystis pyrifera P11B4 male)
CTTGGTGGTAGTGTTGTCGGAAAGGAGTCAGAGGAAGAAGTAGAGGGTGC GATGGACACGTTGTTGGAGTTAAAAGGTGTTGGGCCCGCTACCGCATCAG CACTCTTAGCTGCAGCGCATCCTTCCATTCCATTCATGGCAGATGAAGCA CTTTCCGCCATAGGGCCCCGTGAATACACAAAAAAAGCATTCCTTGGGTT GCTAAAAGCTACAAGAGCAAAGTCTGCGGTCCTTGGAGATTCATTCCCAG CTTCTCGCATTGCAGATGCATTGTGGGCTCATGATGTTTCGAAACGCGTT GTTGGTCTGAAGCGTAGTCATGGTGGAAGCGCAGGAGGTGGAGGGAAAAG GGTAAAGGGAGAAGAATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98106:324..692-

>mRNA_M-pyrifera_M_contig98106.22594.1 ID=mRNA_M-pyrifera_M_contig98106.22594.1|Name=mRNA_M-pyrifera_M_contig98106.22594.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig98106:324..692- (Macrocystis pyrifera P11B4 male)
CTTGGTGGTAGTGTTGTCGGAAAGGAGTCAGAGGAAGAAGTAGAGGGTGC
GATGGACACGTTGTTGGAGTTAAAAGGTGTTGGGCCCGCTACCGCATCAG
CACTCTTAGCTGCAGCGCATCCTTCCATTCCATTCATGGCAGATGAAGCA
CTTTCCGCCATAGGGCCCCGTGAATACACAAAAAAAGCATTCCTTGGGTT
GCTAAAAGCTACAAGAGCAAAGTCTGCGGTCCTTGGAGATTCATTCCCAG
CTTCTCGCATTGCAGATGCATTGTGGGCTCATGATGTTTCGAAACGCGTT
GTTGGTCTGAAGCGTAGTCATGGTGGAAGCGCAGGAGGTGGAGGGAAAAG
GGTAAAGGGAGAAGAATAGCTTGGTGGTAGTGTTGTCGGAAAGGAGTCAG
AGGAAGAAGTAGAGGGTGCGATGGACACGTTGTTGGAGTTAAAAGGTGTT
GGGCCCGCTACCGCATCAGCACTCTTAGCTGCAGCGCATCCTTCCATTCC
ATTCATGGCAGATGAAGCACTTTCCGCCATAGGGCCCCGTGAATACACAA
AAAAAGCATTCCTTGGGTTGCTAAAAGCTACAAGAGCAAAGTCTGCGGTC
CTTGGAGATTCATTCCCAGCTTCTCGCATTGCAGATGCATTGTGGGCTCA
TGATGTTTCGAAACGCGTTGTTGGTCTGAAGCGTAGTCATGGTGGAAGCG
CAGGAGGTGGAGGGAAAAGGGTAAAGGGAGAAGAATAG
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