mRNA_M-pyrifera_M_contig98091.22586.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: A0A5J4XDD3_9CHLO (Hexosyltransferase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XDD3_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 1.620e-8 Identity = 34/111 (30.63%), Postives = 61/111 (54.95%), Query Frame = 1 Query: 25 VRRSWGQRARELGVPIHFFVGRPRGPYCAEVLASEFQQYGDIVVLPELWDSYENLTLKTMHVIQWQAAPPHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGL 357 VR++W A+ G + FF P+ ++L E +Y D+V+LP + +SY N+T +T+ + + A P H+ + DD YV + L+ +LR +P+ ++ VG G+ Sbjct: 14 VRKTWALEAK--GHRVVFFSAVPQNERLFDLLRREAAEYQDVVILPNIHESYFNITHQTLEMCRMAAMDPAVTHL---LKVDDDSYVHMTKLIARLRALPREKIERVGFGV 119
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: A0A6P4YFD6_BRABE (Hexosyltransferase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YFD6_BRABE) HSP 1 Score: 59.3 bits (142), Expect = 1.160e-7 Identity = 41/134 (30.60%), Postives = 65/134 (48.51%), Query Frame = 1 Query: 16 RMRVRRSWGQRARELGVPIH--FFVGRPRGPYCAEVLASEFQQYGDIVVLPELWDSYENLTLKTMHVIQWQAAPPHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGLGHLHKNLPPIDREWSKWY 411 R +R +WG R +G + F +GR P + E ++YGDIV + + ++SYENLTLKT+ ++W + + R DDV+V+ L+ L Q +E + LG + P+ KWY Sbjct: 89 RAAIRETWGNATRIMGYKLATLFVIGRTDDPSLQRTIVEEGRRYGDIVQM-DSYESYENLTLKTISALKWTSM--NCRQAKFVMKTDDDVFVNYPRLVRTLADFRQT-AEEKNLMLGCVVSWAFPVRTPGKKWY 218
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: UPI00165AFDE3 (beta-1,3-galactosyltransferase 2 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165AFDE3) HSP 1 Score: 58.2 bits (139), Expect = 2.800e-7 Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 7 AVGRMRVRRSWGQRARELGVPIHFFVGRPRGPYCA---EVLASEFQQYGDIVVLPELWDSYENLTLKTMHVIQWQAAPPHSRHIPSPS---SIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGLGHLHKNLPPIDREWSKWY 411 A R VR +WG +R+ FF G +G + +L E QQ+ DI+ L L DSY+NLT+KT+ ++QW AA H P+ S + D++V+V L+ +LR P+ G G L ++ P SKW+ Sbjct: 76 AEARQAVRSTWGAPSRDTLTL--FFSGVAQGALLSPLQRLLEKESQQHADIIQLDFL-DSYQNLTIKTVMMMQWLAA-----HCPNASYAMKVDSDIFVNVFHLVQRLRSSPRA-----GFITGSLIRDGRPRRDPSSKWF 203
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: UPI000E45609C (beta-1,3-galactosyltransferase 2-like n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=UPI000E45609C) HSP 1 Score: 57.4 bits (137), Expect = 5.310e-7 Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 1 Query: 7 AVGRMRVRRSWGQRARELGVPIHFFVGRPRGPYCA---EVLASEFQQYGDIVVLPELWDSYENLTLKTMHVIQWQAAPPHSRHIPSPS---SIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGLGHLHKNLPPIDREWSKWY 411 AV R +RR+WG ++ FF+G P G + E L E +++ DI+ + D+Y+NLT+KTM ++ W A H P+ S + D++V+V L+ QLR PQ G G + ++ P SKW+ Sbjct: 81 AVAREAIRRTWGAPGQDTLTL--FFLGLPEGGQLSSLQEQLDEEKRKHADIIQM-NFQDTYQNLTIKTMMMMNWVAT-----HCPNASYVMKVDSDIFVNVLYLISQLRSSPQQ-----GFITGSVIRDGRPRRDSHSKWH 208
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: A0A8M9PYN4_DANRE (beta-1,3-galactosyltransferase 2-like n=2 Tax=Danio rerio TaxID=7955 RepID=A0A8M9PYN4_DANRE) HSP 1 Score: 57.4 bits (137), Expect = 5.390e-7 Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 1 Query: 1 KGAVGRMRVRRSWGQRARELGVPI-HFFV-GRPR--GPYCAEVLASEFQQYGDIVVLPELWDSYENLTLKTMHVIQWQAAPPHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGLGHLHKNLPPIDREWSKWY 411 K A R +RR+WGQ GV I H FV G+P P E L E +++GDI+ + + DSY+NLT+KTM ++ W A + + I D++++V L+ L G + D + G + + P +KWY Sbjct: 80 KDAEARTAIRRTWGQDGLVPGVSILHLFVVGQPARSDPVLQEHLQKESKEHGDIIQM-DFVDSYQNLTIKTMMIMNWVAT--YCQSAWYAMKIDADIFLNVHYLVDYLHGQGESRKDYI---TGSVISDAIPHRDSINKWY 214
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: I0YJJ6_COCSC (Hexosyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YJJ6_COCSC) HSP 1 Score: 57.4 bits (137), Expect = 6.140e-7 Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 1 Query: 1 KGAVGRMRVRRSWGQRARELGVPIHFFVGRPRGPYCAEVLASEFQQYGDIVVLPELWDSYENLTLKTMHVIQWQAAPPHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGLGHLHKNLPPIDRE-WSKWY 411 K A R +R SWG R V FF +P + L E Q GDIVVLP++++ Y+N+T +T+ +++ + P + H + DD YV V+ L+ + VP+ + +GH+ + RE S+WY Sbjct: 195 KNADRRAAIRASWGSDRRLHRVM--FFSAKPVDEAVFDELRREAAQKGDIVVLPQIFEHYDNITHQTLEILRAASMDPLATHA---LKVDDDSYVHVDTLMAVMARVPRRRLF-----MGHIDRESGGPHREPSSQWY 322
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: B3GN6_HUMAN (Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase n=27 Tax=Catarrhini TaxID=9526 RepID=B3GN6_HUMAN) HSP 1 Score: 56.6 bits (135), Expect = 1.090e-6 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 25 VRRSWGQRARELGVPIH--FFVGRP------RGPYCAEVLASEFQQYGDIVVLPELW---DSYENLTLKTMHVIQWQAAP-PHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGL--GHLHKNLPPIDREWSKWY 411 +RR+WGQ G P+ F +G P R AE++A E +++GD++ W D++ NLTLK +H++ W AA PH+R + S DDV+V ++ L+ P G L G L + PI WSK++ Sbjct: 136 IRRTWGQERSYGGRPVRRLFLLGTPGPEDEARAERLAELVALEAREHGDVLQ----WAFADTFLNLTLKHLHLLDWLAARCPHARFLLSGD---DDVFVHTANVVRFLQAQPP------GRHLFSGQLMEGSVPIRDSWSKYF 265
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: Q6ZMB0-3 (Isoform 3 of Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase n=6 Tax=Hominidae TaxID=9604 RepID=Q6ZMB0-3) HSP 1 Score: 56.6 bits (135), Expect = 1.100e-6 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 25 VRRSWGQRARELGVPIH--FFVGRP------RGPYCAEVLASEFQQYGDIVVLPELW---DSYENLTLKTMHVIQWQAAP-PHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGL--GHLHKNLPPIDREWSKWY 411 +RR+WGQ G P+ F +G P R AE++A E +++GD++ W D++ NLTLK +H++ W AA PH+R + S DDV+V ++ L+ P G L G L + PI WSK++ Sbjct: 136 IRRTWGQERSYGGRPVRRLFLLGTPGPEDEARAERLAELVALEAREHGDVLQ----WAFADTFLNLTLKHLHLLDWLAARCPHARFLLSGD---DDVFVHTANVVRFLQAQPP------GRHLFSGQLMEGSVPIRDSWSKYF 265
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: A0A8J9SG12_9CHLO (Beta-1,3-galactosyltransferase GALT1 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SG12_9CHLO) HSP 1 Score: 56.6 bits (135), Expect = 1.150e-6 Identity = 43/138 (31.16%), Postives = 67/138 (48.55%), Query Frame = 1 Query: 1 KGAVGRMRVRRSWGQRARELGVPIHFFVGRPRGPYCAEVLASEFQQYGDIVVLPELWDSYENLTLKTMHVIQWQAAPPHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGLGHLHKNLPPIDRE-WSKWY 411 K A R +R SWG R V FF +P + L E + GDIVVLP +++ Y+N+T +T+ +++ + P + H + DD YV V L+ + VPQ + LGH+ + RE S+W+ Sbjct: 215 KNADRRAAIRESWGSDRRLHRVM--FFSAKPVDEAVFDALRKEAAEKGDIVVLPGIFEHYDNITHQTLEILRAASMDPVATHA---LKVDDDSYVHVNNLMAVMARVPQRRLF-----LGHIDRESGGPHREPSSQWH 342
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Match: G1S4E6_NOMLE (Hexosyltransferase n=8 Tax=Simiiformes TaxID=314293 RepID=G1S4E6_NOMLE) HSP 1 Score: 56.2 bits (134), Expect = 1.490e-6 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 25 VRRSWGQRARELGVPIH--FFVGRP------RGPYCAEVLASEFQQYGDIVVLPELW---DSYENLTLKTMHVIQWQAAP-PHSRHIPSPSSIHDDVYVDVEGLLVQLRGVPQVLVDEVGVGL--GHLHKNLPPIDREWSKWY 411 +RR+WGQ G P+ F +G P R AE++A E +++GD++ W D++ NLTLK +H++ W AA PH+R + S DDV+V ++ L+ P G L G L + PI WSK++ Sbjct: 136 IRRTWGQERSYSGRPVRRLFLLGTPGPEDEERVERLAELVALEAREHGDVLQ----WAFADTFLNLTLKHLHLLDWLAARCPHARFLLSGD---DDVFVHTANVVRFLQAQPP------GRHLFSGQLMEGSVPIRDSWSKYF 265 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98091.22586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98091.22586.1 >prot_M-pyrifera_M_contig98091.22586.1 ID=prot_M-pyrifera_M_contig98091.22586.1|Name=mRNA_M-pyrifera_M_contig98091.22586.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp MRVRRSWGQRARELGVPIHFFVGRPRGPYCAEVLASEFQQYGDIVVLPELback to top mRNA from alignment at M-pyrifera_M_contig98091:10..567- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98091.22586.1 ID=mRNA_M-pyrifera_M_contig98091.22586.1|Name=mRNA_M-pyrifera_M_contig98091.22586.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig98091:10..567- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98091:10..567- >mRNA_M-pyrifera_M_contig98091.22586.1 ID=mRNA_M-pyrifera_M_contig98091.22586.1|Name=mRNA_M-pyrifera_M_contig98091.22586.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig98091:10..567- (Macrocystis pyrifera P11B4 male)back to top |