mRNA_M-pyrifera_M_contig9800.22568.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI) HSP 1 Score: 202 bits (513), Expect = 4.550e-63 Identity = 102/114 (89.47%), Postives = 108/114 (94.74%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 VCVSAVDP LFPACV AGAEMVELGNFD FYDQGLTFSAEDVLEMTRKT++LLP+ PLSVTVPHTLDLD+QV+LA ELE LGVDVIQTEGKFSLDPSKGG+QGAIERAAPTLAA Sbjct: 89 VCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAA 202
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA) HSP 1 Score: 163 bits (413), Expect = 5.440e-48 Identity = 78/114 (68.42%), Postives = 95/114 (83.33%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 +CVSA++P L CV AGA+MVELGNFD FYDQG+ F+A+DV+ MT+ T++LLP PLSVT+PH L +D+QV LAQ L+ LGVDVIQTEGK+SLDPS GG+QG IERAAP LAA Sbjct: 87 ICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAA 200
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: UPI001882BC92 (DUF561 domain-containing protein n=1 Tax=Cyanobacterium stanieri TaxID=102235 RepID=UPI001882BC92) HSP 1 Score: 151 bits (381), Expect = 1.570e-43 Identity = 76/114 (66.67%), Postives = 94/114 (82.46%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 VCVSAV+P LF + V AGA+++E+GNFDSFY QG+ FSAEDVL +TR+T++LLP V LSVTVPHTL LDEQV LAQ+LEA G D+IQTEG S +P+ G+ G IE+A+PTLAA Sbjct: 65 VCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLSLTRQTRALLPHVLLSVTVPHTLPLDEQVELAQKLEAEGADIIQTEGGTSSNPNHSGILGLIEKASPTLAA 178
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: A0A2Z7CW76_9LAMI (Uncharacterized protein ycf23 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CW76_9LAMI) HSP 1 Score: 151 bits (381), Expect = 6.930e-43 Identity = 79/115 (68.70%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEG-KFSLDPSKGGVQGAIERAAPTLAA 342 VCVS+VDP+ FPA V AGA MVE+GN+DSFYD GLTFS E +L +T++TK++LP+V LSVTVPHTL L +QV LAQ+LE GVD+IQTEG KFS +PSK GV G IE+A+PTLAA Sbjct: 114 VCVSSVDPAAFPAAVEAGAVMVEIGNYDSFYDMGLTFSPEQILSLTKETKTMLPTVTLSVTVPHTLSLPDQVKLAQQLEQEGVDIIQTEGGKFS-NPSKAGVLGLIEKASPTLAA 227
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: A0A1E5QXG4_9CHRO (Uncharacterized protein n=2 Tax=unclassified Cyanobacterium TaxID=2629879 RepID=A0A1E5QXG4_9CHRO) HSP 1 Score: 148 bits (373), Expect = 2.530e-42 Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 VCVSAV+P LF + V AGA+++E+GNFDSFY QG+ FSAEDVL +TR+T++LLP++ LSVTVPHTL L EQV LAQ LEA G D+IQTEG S P+ G+ G IE+A+PTLAA Sbjct: 65 VCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLNLTRQTRALLPNILLSVTVPHTLPLHEQVELAQALEAAGADIIQTEGGTSSKPNHSGILGLIEKASPTLAA 178
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: K9YHE7_CYASC (Uncharacterized protein n=1 Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) TaxID=292563 RepID=K9YHE7_CYASC) HSP 1 Score: 147 bits (371), Expect = 5.650e-42 Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 VCVSAV+P +F V AGA+++E+GNFDSFY QG+ FSAEDVL +TR+T+SLLP+V LSVTVPHTL LDEQV LAQ+L G D+IQTEG S +P+ G+ G IE+A+PTLAA Sbjct: 69 VCVSAVEPQVFVNAVEAGADLIEIGNFDSFYAQGINFSAEDVLSLTRETRSLLPNVLLSVTVPHTLPLDEQVELAQKLVTAGADIIQTEGGTSSNPNHSGILGLIEKASPTLAA 182
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: A0A2N9GTE5_FAGSY (Uncharacterized protein ycf23 n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GTE5_FAGSY) HSP 1 Score: 146 bits (369), Expect = 6.030e-42 Identity = 75/114 (65.79%), Postives = 90/114 (78.95%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 VCVS+VDP+ FPA V AGA MVE+GN+DSFY+ GL FS E +L +T++TKS+LPSV LSVTVPHTL L +QV LA+ LE GVD+IQTEG +PSK GV G IE+A PTLAA Sbjct: 38 VCVSSVDPAAFPAAVEAGALMVEIGNYDSFYETGLVFSPEQILNLTKETKSILPSVTLSVTVPHTLSLPDQVKLAEMLEQEGVDIIQTEGGKCSNPSKSGVLGLIEKATPTLAA 151
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: A0A1Z4RLF4_9CHRO (Uncharacterized protein n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RLF4_9CHRO) HSP 1 Score: 147 bits (370), Expect = 7.570e-42 Identity = 73/114 (64.04%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 +CVSAVDP LF + V AGA+++E+GNFDSFY QG F A +VLE+T++T+SLLP V LSVTVPH L LDEQV LA++L +G D+IQTEG S+ P K G+QG IE+AAPTLAA Sbjct: 66 ICVSAVDPQLFVSAVNAGADLIEIGNFDSFYSQGRKFEAPEVLEITQQTRSLLPGVTLSVTVPHILALDEQVRLAEQLVEIGADIIQTEGGTSIAPKKPGIQGLIEKAAPTLAA 179
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: A0A6I9TI68_SESIN (Uncharacterized protein ycf23 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TI68_SESIN) HSP 1 Score: 147 bits (372), Expect = 1.660e-41 Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 +CVS+VDP+ FPA + AGA MVE+GN+DSFY+ GLTFS+E +L +T++TK +LPSV LSVTVPHTL L +QV LA++LE GVD+IQTEG PSK G+ G IE+A PTLAA Sbjct: 117 ICVSSVDPAAFPAAIEAGALMVEIGNYDSFYEMGLTFSSEQILNLTKETKRILPSVALSVTVPHTLSLPDQVKLAEQLEQEGVDIIQTEGGKCSSPSKAGILGLIEKATPTLAA 230
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Match: A0A6P6UBT6_COFAR (Uncharacterized protein ycf23 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6UBT6_COFAR) HSP 1 Score: 145 bits (367), Expect = 2.390e-41 Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 1 Query: 1 VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKSLLPSVPLSVTVPHTLDLDEQVNLAQELEALGVDVIQTEGKFSLDPSKGGVQGAIERAAPTLAA 342 VCVS+VDP+ FP V AGA MVE+GN+DSFY+ GLTFS E +L++ ++T+ +LPSVPLSVTVPH+L L +QV LA++LE GVD+IQTEG PSK G+ G IE+A PTLAA Sbjct: 63 VCVSSVDPAAFPIAVEAGASMVEIGNYDSFYEMGLTFSPEQILDLAKETRRILPSVPLSVTVPHSLSLPDQVKLAEQLENEGVDIIQTEGGKCSSPSKAGILGLIEKATPTLAA 176 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9800.22568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9800.22568.1 >prot_M-pyrifera_M_contig9800.22568.1 ID=prot_M-pyrifera_M_contig9800.22568.1|Name=mRNA_M-pyrifera_M_contig9800.22568.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp VCVSAVDPSLFPACVAAGAEMVELGNFDSFYDQGLTFSAEDVLEMTRKTKback to top mRNA from alignment at M-pyrifera_M_contig9800:362..2505+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9800.22568.1 ID=mRNA_M-pyrifera_M_contig9800.22568.1|Name=mRNA_M-pyrifera_M_contig9800.22568.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2144bp|location=Sequence derived from alignment at M-pyrifera_M_contig9800:362..2505+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9800:362..2505+ >mRNA_M-pyrifera_M_contig9800.22568.1 ID=mRNA_M-pyrifera_M_contig9800.22568.1|Name=mRNA_M-pyrifera_M_contig9800.22568.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig9800:362..2505+ (Macrocystis pyrifera P11B4 male)back to top |