prot_M-pyrifera_M_contig110756.2256.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110756.2256.1
Unique Nameprot_M-pyrifera_M_contig110756.2256.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
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BLAST of mRNA_M-pyrifera_M_contig110756.2256.1 vs. uniprot
Match: L8GRT4_ACACA (Peptide-aspartate beta-dioxygenase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRT4_ACACA)

HSP 1 Score: 60.5 bits (145), Expect = 2.080e-9
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:    1 YEVVLEPGDVLYIPPFHFHHVTVVHSDAPSISVSTHSESHQAWLRERIM 49
            +EVVL PGDVLY+PP+ FH VTVV  D  SISVS H+ES +  LRE +M
Sbjct:  311 HEVVLHPGDVLYLPPYWFHEVTVVGDDV-SISVSVHTESDEVALREAVM 358
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BLAST of mRNA_M-pyrifera_M_contig110756.2256.1 vs. uniprot
Match: A0A6B2LAI5_9EUKA (JmjC domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAI5_9EUKA)

HSP 1 Score: 52.0 bits (123), Expect = 1.930e-6
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:    2 EVVLEPGDVLYIPPFHFHHVTVVHSDAPSISVSTHSESHQAWLRE 46
            EVVL PGDVLYIPP+ FH VT V  +  S+SVS H+ES Q+ +R+
Sbjct:  176 EVVLSPGDVLYIPPYWFHDVTAVGVNV-SMSVSIHTESDQSHIRD 219
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110756.2256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
L8GRT4_ACACA2.080e-963.27Peptide-aspartate beta-dioxygenase n=1 Tax=Acantha... [more]
A0A6B2LAI5_9EUKA1.930e-660.00JmjC domain-containing protein n=1 Tax=Arcella int... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003347JmjC domainPFAMPF08007Cupin_4coord: 2..42
e-value: 1.9E-7
score: 30.8
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 1..49
score: 13.669
NoneNo IPR availableGENE3D2.60.120.1660coord: 1..41
e-value: 1.7E-10
score: 43.0
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110756contigM-pyrifera_M_contig110756:86..232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110756.2256.1mRNA_M-pyrifera_M_contig110756.2256.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110756 86..232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110756.2256.1 ID=prot_M-pyrifera_M_contig110756.2256.1|Name=mRNA_M-pyrifera_M_contig110756.2256.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
YEVVLEPGDVLYIPPFHFHHVTVVHSDAPSISVSTHSESHQAWLRERIM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom