prot_M-pyrifera_M_contig979.22537.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig979.22537.1
Unique Name	prot_M-pyrifera_M_contig979.22537.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	193

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig979.22537.1 vs. uniprot
Match: A0A6H5JQP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP8_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 2.390e-36
Identity = 95/212 (44.81%), Postives = 110/212 (51.89%), Query Frame = 0

Query:   25 GDPLAALVXXXXXXXXXXXLLAGFLGGDDQTRLEAAVKVEPGSPTATIIKTGPGMFTRAVMEWMVAATDDASYTAIQATDGEVTK-LAEENIELAEGMTEVVEGA-----------------------------------------SPAVAATR-VMLLPPSYLYPVPNNAE----GDLIGDGGEEGVRERAGRFFSEESLAAHLWGRSWQR 189
            GDPL+AL+           LLAG LGGDD+ RL  AV+VE  S T TI+KTGPG+FTRAVM WMV++       A    DG  T   AEE+I  + G       A                                           A+AATR  M+LPPSYLYP+PNNA     G LIGDG E GVRERAG + S ESLAAHLWGRSWQ+
Sbjct:  295 GDPLSALMGALGEEGGAGGLLAGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDRAAPATADGSGTSSAAEEDIFHSTGTAARDADAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAATRPAMILPPSYLYPIPNNAAAAKAGLLIGDGTESGVRERAGGYLSSESLAAHLWGRSWQQ 506

[Close]

BLAST of mRNA_M-pyrifera_M_contig979.22537.1 vs. uniprot
Match: D7G7P2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P2_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 3.870e-33
Identity = 92/223 (41.26%), Postives = 105/223 (47.09%), Query Frame = 0

Query:   25 GDPLAALVXXXXXXXXXXXLLAGFLGGDDQTRLEAAVKVEPGSPTATIIKTGPGMFTRAVMEWMVAATDDASYTAIQATDGEVTKLAEENIELAEGMTEVVEGASPAVAATRVM------------------------------------------------------LLPPSYLYPVPNNAE----GDLIGDGGEEGVRERAGRFFSEESLAAHLWGRSWQR 189
            GDPL+AL+      XXXXXLL G LGGDD+ RL  AV+VE  S T TI+KTGPG+FTRAVM WMV++       A   TDG  T        ++    E+      A   T V                                                        LPPSYLYPVPNNA     G LIGDG E GVRER G + S ESLAAHLWGRSWQ+
Sbjct:   62 GDPLSALMGALGGEXXXXXLLTGLLGGDDRARLRQAVEVEADSATETIVKTGPGVFTRAVMAWMVSSATGEDGAAPTTTDGSGT--------ISTAQEEIFHSTGTAALDTDVFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPSYLYPVPNNAAAAKAGLLIGDGTESGVRERVGGYLSSESLAAHLWGRSWQQ 276

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig979.22537.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig979.22537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JQP8_9PHAE	2.390e-36	44.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7P2_ECTSI	3.870e-33	41.26	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	TMHMM	TMhelix		coord: 28..50

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig979	contig	M-pyrifera_M_contig979:17692..19082 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig979.22537.1	mRNA_M-pyrifera_M_contig979.22537.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig979 17692..19085 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig979.22537.1 ID=prot_M-pyrifera_M_contig979.22537.1|Name=mRNA_M-pyrifera_M_contig979.22537.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
MNKALAMSPGAVARGGGGGGCGASGDPLAALVGALGAGGGGGGLLAGFLG
GDDQTRLEAAVKVEPGSPTATIIKTGPGMFTRAVMEWMVAATDDASYTAI
QATDGEVTKLAEENIELAEGMTEVVEGASPAVAATRVMLLPPSYLYPVPN
NAEGDLIGDGGEEGVRERAGRFFSEESLAAHLWGRSWQRGLS*