mRNA_M-pyrifera_M_contig101033.225.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101033.225.1
Unique NamemRNA_M-pyrifera_M_contig101033.225.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A482RDA3_9ARCH (DNA-directed RNA polymerase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDA3_9ARCH)

HSP 1 Score: 321 bits (823), Expect = 2.620e-107
Identity = 155/219 (70.78%), Postives = 181/219 (82.65%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            R+D S+  RP E GVVDRVMLTTN  GQR VK+RVR+VR+P++GDKFASRHGQKGTVGMLYR+EDMPFT++ +TPDII+NPHA+PSRMTVG LIEC+  K     G EGD TPF T  +V K    L   GYQR GNEVMY GHTGRRLE Q+F GPTYYQRLKHMV DK+H+RSRGPT++L RQPMEGR++ GGLRFGEMERDCI+AHGTA+LL+ R+
Sbjct:   58 RRDVSLCSRPAETGVVDRVMLTTNVKGQRMVKLRVRSVRLPQVGDKFASRHGQKGTVGMLYRQEDMPFTQQGMTPDIIVNPHAIPSRMTVGHLIECLFGKVATFVGIEGDGTPF-TDVTVHKLAVRLHALGYQRHGNEVMYNGHTGRRLEAQVFFGPTYYQRLKHMVDDKIHSRSRGPTTMLTRQPMEGRARDGGLRFGEMERDCIIAHGTANLLQERL 275
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BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A7S3SQ47_EMIHU (DNA-directed RNA polymerase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SQ47_EMIHU)

HSP 1 Score: 308 bits (789), Expect = 1.020e-101
Identity = 143/219 (65.30%), Postives = 185/219 (84.47%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            ++D+S  +R +E G VD+V+LTTN++G++ VKVR+R+VR+P+IGDKFASRHGQKGT+G+ YR+EDMPF  E ITPDII+NPHA+PSRMT+G L+EC+LSK   + G EGDATPF +  +VD   K LQ+ GYQ+ G EVMY GHTGRRLE+ IFLGPTYYQRLKHMV DK+H+R+RGP +LL RQPMEGR++ GGLRFGEMERDC+++HG AS+++ R+
Sbjct:   98 KRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRIRSVRVPQIGDKFASRHGQKGTIGITYRQEDMPFNCEGITPDIIVNPHAIPSRMTIGHLVECLLSKVSSLTGDEGDATPFASV-TVDDISKLLQNFGYQKRGFEVMYNGHTGRRLESSIFLGPTYYQRLKHMVDDKIHSRARGPVTLLTRQPMEGRARDGGLRFGEMERDCMISHGVASIMKERL 315
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BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A5A8DDD1_CAFRO (DNA-directed RNA polymerase subunit beta n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDD1_CAFRO)

HSP 1 Score: 326 bits (836), Expect = 2.520e-100
Identity = 156/219 (71.23%), Postives = 184/219 (84.02%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            ++ +S+  R TE GVVDRV+L++++DGQR  KVRVRN+R P+IGDKFASRHGQKGTVGM +R EDMPFTRE I PDIIMNPHAVPSRMTVG LIEC+L K +  +G EGD TPF+ +F+V+    +LQ  GYQR+GNEVMY GHTGR++E+QIFLGP YYQRLKHMV DKVHARSRGP  LL RQPMEGR K GGLRFGEMERDCI++HGTA+LL+ RM
Sbjct:  955 KRSTSIKARVTEAGVVDRVLLSSDRDGQRFTKVRVRNIRYPQIGDKFASRHGQKGTVGMTFRMEDMPFTREGIVPDIIMNPHAVPSRMTVGHLIECLLGKVMTHHGTEGDGTPFIESFNVETVSGYLQQIGYQRSGNEVMYNGHTGRQMESQIFLGPVYYQRLKHMVDDKVHARSRGPMQLLTRQPMEGRGKDGGLRFGEMERDCIISHGTAALLQERM 1173
[Close]
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A077RC16_9BASI (DNA-directed RNA polymerase n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077RC16_9BASI)

HSP 1 Score: 305 bits (781), Expect = 3.850e-100
Identity = 138/219 (63.01%), Postives = 179/219 (81.74%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            +KD+S+ ++ TE+G++D+V++TTN  G + VKVRVRN R+P+ GDKFASRHGQKGT+G+ YR+EDMPF+ E +TPDII+NPHA+PSRMT+G L+EC+LSK   + G EGDATPF T  +V+     L+  GYQ  G EVMY GHTGR+L+ Q++LGPTYYQRLKHMV DK+H+R+RGP  +L RQP+EGRS+GGGLRFGEMERDC++AHG A  L+ RM
Sbjct:  126 KKDASISLKSTENGIIDQVLVTTNSHGNKFVKVRVRNTRVPQTGDKFASRHGQKGTIGITYRQEDMPFSAEGVTPDIIINPHAIPSRMTIGHLVECLLSKVAALSGQEGDATPF-TELTVEAVSSILRGLGYQSRGLEVMYHGHTGRKLQAQVYLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRGGGLRFGEMERDCMIAHGIAGFLKERM 343
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BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A8A0XYQ8_9PEZI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Watsoniomyces obsoletus TaxID=2796175 RepID=A0A8A0XYQ8_9PEZI)

HSP 1 Score: 304 bits (779), Expect = 1.560e-99
Identity = 141/219 (64.38%), Postives = 178/219 (81.28%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            ++D S  +R TE G+VD+V++TTN +G R VKVR+R  +IP+IGDKFASRHGQKGT+G+ YR+EDMPFTR+ I PD+I+NPHA+PSRMT+  LIEC LSK   + GFEGDATPF T  +VD   + L+DHGYQ  G EVMY GHTG++L  QIFLGPTYYQRL+HMV DK+HAR+RGP  +L RQP+EGR++ GGLRFGEMERDC+VAHG ++ L+ R+
Sbjct:  196 KRDMSTPLRTTESGIVDKVLVTTNSEGLRFVKVRMRTTKIPQIGDKFASRHGQKGTIGITYRQEDMPFTRQGIVPDLIINPHAIPSRMTIAHLIECQLSKVSALKGFEGDATPF-TDVTVDSVSQLLRDHGYQSRGFEVMYNGHTGKKLVAQIFLGPTYYQRLRHMVDDKIHARARGPVQILTRQPVEGRARDGGLRFGEMERDCMVAHGASAFLKERL 413
[Close]
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A7S0NSX2_9EUKA (DNA-directed RNA polymerase subunit beta n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NSX2_9EUKA)

HSP 1 Score: 310 bits (795), Expect = 3.860e-99
Identity = 144/219 (65.75%), Postives = 187/219 (85.39%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            R+D+S  +R +E G VD+V+LTTN++G++ VKVRVR+VR+P+IGDKFASRHGQKGT+G+ YR+EDMPF+ E ITPDII+NPHA+PSRMT+G L+EC+LSK   + G EGDATPF T+ +VD+  K LQ+ GYQ+ G EVM+ GHTGRR+E  +FLGPTYYQRLKHMV DK+H+R+RGP +LL RQPMEGR++ GGLRFGEMERDC+++HG AS+L+ R+
Sbjct:  383 RRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRVRSVRVPQIGDKFASRHGQKGTIGITYRQEDMPFSCEGITPDIIVNPHAIPSRMTIGHLVECLLSKVSSLTGDEGDATPF-TSVNVDEISKLLQNFGYQKRGFEVMFNGHTGRRMEANVFLGPTYYQRLKHMVDDKIHSRARGPVTLLTRQPMEGRARDGGLRFGEMERDCMISHGVASILKERL 600
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BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A7S1C2I4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2I4_9STRA)

HSP 1 Score: 321 bits (822), Expect = 6.750e-99
Identity = 150/218 (68.81%), Postives = 184/218 (84.40%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSR 654
            ++D+SV +R  E GV+DRVMLTTN+DG+R  KVR+R+VR+P+IGDKFASRHGQKGT+GM YR EDMP++RE + PDII+NPHA+PSRMT+G LIEC++ K +   GF GDATPF ++ +V+     L +HGYQR GNEVM+ GHTGR+LE Q+FLGPTYYQRLKHMV DKVHAR+RGP +LL RQPMEGRS+ GGLRFGEMERDCI+AHGTA LL+ R
Sbjct:  922 KRDTSVVVRHNETGVIDRVMLTTNRDGERFTKVRIRSVRVPQIGDKFASRHGQKGTIGMTYRMEDMPWSREGVVPDIIVNPHAIPSRMTIGHLIECLMGKVMTQLGFLGDATPF-SSVTVEYVAGLLHEHGYQRNGNEVMFNGHTGRKLEAQVFLGPTYYQRLKHMVGDKVHARARGPVALLTRQPMEGRSRDGGLRFGEMERDCIIAHGTAQLLQER 1138
[Close]
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A0V0XVX8_TRIPS (DNA-directed RNA polymerase n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V0XVX8_TRIPS)

HSP 1 Score: 307 bits (786), Expect = 1.010e-98
Identity = 143/219 (65.30%), Postives = 176/219 (80.37%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            +KD+S F+R +E G+VD+VML+ N DG + VKVRVR++RIP+IGDKFASRHGQKGT+GM+YR+EDMPFT E ITPDII+NPHA+PSRMT+G LIEC+  K     G  GDATPF  + +V K    LQD+GY   GNEVMY G TGR+L TQ+F+GPTYYQRLKHMV DK+H+R+RGP  ++ RQPMEGRS+ GGLRFGEMERDC +AHG A  L+ R+
Sbjct:  298 KKDASTFLRASETGIVDQVMLSVNADGNKFVKVRVRSIRIPQIGDKFASRHGQKGTIGMVYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANRGEIGDATPFNDSVNVQKVSSLLQDYGYHLRGNEVMYSGFTGRKLNTQVFIGPTYYQRLKHMVDDKIHSRARGPLQMMARQPMEGRSRDGGLRFGEMERDCQIAHGAAHFLKERL 516
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BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: Q70Q07_VICSA (DNA-directed RNA polymerase (Fragment) n=7 Tax=Pentapetalae TaxID=1437201 RepID=Q70Q07_VICSA)

HSP 1 Score: 301 bits (770), Expect = 1.430e-98
Identity = 145/219 (66.21%), Postives = 173/219 (79.00%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            ++D S+ +R +E+G+VD+V+LTTN DG R VKVRVR+VRIP+IGDKF+SRHGQKGTVGM Y +EDMP+T E ITPDII+NPHA+PSRMT+GQLIEC++ K     G EGDATPF T  +VD   K L   GYQ  G E MY GHTGRRL   IFLGPTYYQRLKHMV DK+H+R RGP  +L RQP EGRS+ GGLRFGEMERDC++AHG A  L+ R+
Sbjct:  160 KRDHSISLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPF-TDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERL 377
[Close]
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match: A0A146IHK4_MYCCL (DNA-directed RNA polymerase n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IHK4_MYCCL)

HSP 1 Score: 303 bits (776), Expect = 2.010e-98
Identity = 140/219 (63.93%), Postives = 177/219 (80.82%), Query Frame = 1 
Query:    1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
            R+D S  ++ TE G+VD+V++TTN DGQ+ VKVRVR  RIP+IGDKFASRHGQKGT+G+ YR+EDMPFT E I PDII+NPHA+PSRMT+G L+EC+LSK   + G EGDATPF T  +V+    FL++ GYQ  G EVMY GHT R+L+ Q++LGPTYYQRLKHMV DK+H+R+RGP  +L RQP+EGRS+ GGLRFGEMERDC+++HG A  L+ R+
Sbjct:  200 RRDVSTPLKSTESGIVDQVLITTNSDGQKFVKVRVRATRIPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGIVPDIIINPHAIPSRMTIGHLVECLLSKVATLIGNEGDATPF-TELTVESVSTFLREKGYQSRGLEVMYHGHTARKLQAQVYLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERL 417
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482RDA3_9ARCH2.620e-10770.78DNA-directed RNA polymerase (Fragment) n=1 Tax=arc... [more]
A0A7S3SQ47_EMIHU1.020e-10165.30DNA-directed RNA polymerase n=1 Tax=Emiliania huxl... [more]
A0A5A8DDD1_CAFRO2.520e-10071.23DNA-directed RNA polymerase subunit beta n=4 Tax=C... [more]
A0A077RC16_9BASI3.850e-10063.01DNA-directed RNA polymerase n=1 Tax=Melanopsichium... [more]
A0A8A0XYQ8_9PEZI1.560e-9964.38DNA-directed RNA polymerase (Fragment) n=1 Tax=Wat... [more]
A0A7S0NSX2_9EUKA3.860e-9965.75DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]
A0A7S1C2I4_9STRA6.750e-9968.81DNA-directed RNA polymerase subunit beta n=1 Tax=B... [more]
A0A0V0XVX8_TRIPS1.010e-9865.30DNA-directed RNA polymerase n=1 Tax=Trichinella ps... [more]
Q70Q07_VICSA1.430e-9866.21DNA-directed RNA polymerase (Fragment) n=7 Tax=Pen... [more]
A0A146IHK4_MYCCL2.010e-9863.93DNA-directed RNA polymerase n=1 Tax=Mycena chlorop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101033contigM-pyrifera_M_contig101033:6..662 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score309.3
Seed ortholog evalue1.4e-81
Seed eggNOG ortholog5217.XP_007002088.1
Preferred nameRPB2
KEGG rclassRC02795
KEGG koko:K03010
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000428,GO:0000775,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0005739,GO:0006139,GO:0006325,GO:0006342,GO:0006351,GO:0006355,GO:0006366,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031047,GO:0031048,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031618,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098687,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EggNOG OGs38F5S@33154,3NW78@4751,3UYSF@5204,3VE8R@5234,COG0085@1,KOG0214@2759
EC2.7.7.6
COG Functional cat.K
Best tax levelTremellales
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Exons1
Model size657
Cds size636
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815507.8238122-UTR-M-pyrifera_M_contig101033:5..261622815507.8238122-UTR-M-pyrifera_M_contig101033:5..26Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101033 6..26 +
1692277442.7952263-UTR-M-pyrifera_M_contig101033:5..261692277442.7952263-UTR-M-pyrifera_M_contig101033:5..26Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101033 6..26 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815507.8369327-CDS-M-pyrifera_M_contig101033:26..6621622815507.8369327-CDS-M-pyrifera_M_contig101033:26..662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101033 27..662 +
1692277442.8143451-CDS-M-pyrifera_M_contig101033:26..6621692277442.8143451-CDS-M-pyrifera_M_contig101033:26..662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101033 27..662 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101033.225.1prot_M-pyrifera_M_contig101033.225.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101033 27..662 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101033.225.1

>prot_M-pyrifera_M_contig101033.225.1 ID=prot_M-pyrifera_M_contig101033.225.1|Name=mRNA_M-pyrifera_M_contig101033.225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp
MRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTV
GMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGF
EGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGP
TYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIV
AHGTASLLRSRM
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mRNA from alignment at M-pyrifera_M_contig101033:6..662+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101033.225.1 ID=mRNA_M-pyrifera_M_contig101033.225.1|Name=mRNA_M-pyrifera_M_contig101033.225.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig101033:6..662+ (Macrocystis pyrifera P11B4 male)
CGCAAAGATTCATCTGTTTTCATGCGTCCAACTGAACATGGTGTAGTTGA
TCGTGTCATGTTGACAACCAACAAGGATGGACAACGTGCAGTCAAAGTGA
GAGTGCGAAACGTGCGTATTCCTGAAATTGGTGACAAGTTTGCCAGTCGT
CACGGACAGAAAGGAACAGTGGGGATGTTGTATCGTGAAGAAGATATGCC
ATTTACTCGTGAGGCAATCACTCCTGACATTATCATGAACCCTCATGCTG
TTCCATCTCGAATGACAGTTGGTCAGTTGATTGAATGCGTGCTTTCGAAA
GCAGTGATTATCTATGGATTTGAAGGAGATGCAACTCCATTCTTGACAAC
TTTCTCCGTTGACAAGCCATACAAATTCTTACAAGACCATGGCTACCAAC
GAGCTGGCAACGAAGTGATGTATTGTGGCCACACTGGCCGTCGACTTGAA
ACGCAAATCTTCCTCGGACCCACCTACTACCAACGTCTCAAGCATATGGT
TGCAGACAAAGTCCATGCACGTTCACGAGGTCCAACATCTCTCCTTGTCC
GCCAACCAATGGAAGGGCGAAGCAAAGGTGGAGGATTGCGATTTGGAGAA
ATGGAACGAGATTGCATTGTTGCTCATGGCACAGCATCTCTCCTTCGCTC
TCGCATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101033:6..662+

>mRNA_M-pyrifera_M_contig101033.225.1 ID=mRNA_M-pyrifera_M_contig101033.225.1|Name=mRNA_M-pyrifera_M_contig101033.225.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig101033:6..662+ (Macrocystis pyrifera P11B4 male)
ATGCGTCCAACTGAACATGGTGTAGTTGATCGTGTCATGTTGACAACCAA
CAAGGATGGACAACGTGCAGTCAAAGTGAGAGTGCGAAACGTGCGTATTC
CTGAAATTGGTGACAAGTTTGCCAGTCGTCACGGACAGAAAGGAACAGTG
GGGATGTTGTATCGTGAAGAAGATATGCCATTTACTCGTGAGGCAATCAC
TCCTGACATTATCATGAACCCTCATGCTGTTCCATCTCGAATGACAGTTG
GTCAGTTGATTGAATGCGTGCTTTCGAAAGCAGTGATTATCTATGGATTT
GAAGGAGATGCAACTCCATTCTTGACAACTTTCTCCGTTGACAAGCCATA
CAAATTCTTACAAGACCATGGCTACCAACGAGCTGGCAACGAAGTGATGT
ATTGTGGCCACACTGGCCGTCGACTTGAAACGCAAATCTTCCTCGGACCC
ACCTACTACCAACGTCTCAAGCATATGGTTGCAGACAAAGTCCATGCACG
TTCACGAGGTCCAACATCTCTCCTTGTCCGCCAACCAATGGAAGGGCGAA
GCAAAGGTGGAGGATTGCGATTTGGAGAAATGGAACGAGATTGCATTGTT
GCTCATGGCACAGCATCTCTCCTTCGCTCTCGCATGATGCGTCCAACTGA
ACATGGTGTAGTTGATCGTGTCATGTTGACAACCAACAAGGATGGACAAC
GTGCAGTCAAAGTGAGAGTGCGAAACGTGCGTATTCCTGAAATTGGTGAC
AAGTTTGCCAGTCGTCACGGACAGAAAGGAACAGTGGGGATGTTGTATCG
TGAAGAAGATATGCCATTTACTCGTGAGGCAATCACTCCTGACATTATCA
TGAACCCTCATGCTGTTCCATCTCGAATGACAGTTGGTCAGTTGATTGAA
TGCGTGCTTTCGAAAGCAGTGATTATCTATGGATTTGAAGGAGATGCAAC
TCCATTCTTGACAACTTTCTCCGTTGACAAGCCATACAAATTCTTACAAG
ACCATGGCTACCAACGAGCTGGCAACGAAGTGATGTATTGTGGCCACACT
GGCCGTCGACTTGAAACGCAAATCTTCCTCGGACCCACCTACTACCAACG
TCTCAAGCATATGGTTGCAGACAAAGTCCATGCACGTTCACGAGGTCCAA
CATCTCTCCTTGTCCGCCAACCAATGGAAGGGCGAAGCAAAGGTGGAGGA
TTGCGATTTGGAGAAATGGAACGAGATTGCATTGTTGCTCATGGCACAGC
ATCTCTCCTTCGCTCTCGCATG
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