mRNA_M-pyrifera_M_contig97608.22486.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97608.22486.1
Unique NamemRNA_M-pyrifera_M_contig97608.22486.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: A0A8C4QBK2_EPTBU (Uncharacterized protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QBK2_EPTBU)

HSP 1 Score: 226 bits (577), Expect = 1.780e-64
Identity = 114/230 (49.57%), Postives = 157/230 (68.26%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDK 699
            +I MTTTA AR RSL+ +  P I++VEEAAEVLE H+ A + P+ QHL+LIGDHQQLRP    ++L ++  +D+SLFER++    PY+TL+TQHRMRPEIA L+ P IY++L +HPSVS +  + G+  NL F  H  PE G +  + S +N  EA  V +  RY+++  Y    VT+LTTY GQ+  +++    L+P    D VRV  VD +QGEEN I++LSLVRS+K
Sbjct:  810 VIGMTTTAAARNRSLLQQLKPSIIIVEEAAEVLEAHVFAALNPACQHLILIGDHQQLRPNPTVYELSKRYHLDLSLFERMVKNNIPYITLSTQHRMRPEIATLIVPHIYKQLNNHPSVSMFKDIKGLNTNLFFLDHEEPEEGVE-DTRSHNNPHEARFVVEFCRYILKQGYKPTQVTVLTTYNGQLLALKK----LMPKTSFDGVRVCVVDKYQGEENDIVLLSLVRSNK 1034          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: A0A2C9M9Z9_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9M9Z9_BIOGL)

HSP 1 Score: 219 bits (558), Expect = 1.060e-62
Identity = 115/230 (50.00%), Postives = 158/230 (68.70%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDK 699
            +I MTTT  A+ + ++ +    I++VEEAAEVLE HI+  +  + QHL+LIGDHQQLRPK  +++L R   +D+SLFERLIL   P+VTL  QHRMRPEI+ +++  IY EL DHPSV ++  + GV++++ F  H + E G ++ + SK N  EA  V  L  YL ++ Y    +TI+TTY+GQV  IR+ ++NL P     + RVS VDDFQGEEN IIILSLVRS+K
Sbjct:  591 VIGMTTTGAAKYKDILEKVGCNIVIVEEAAEVLESHIVTALSKNCQHLILIGDHQQLRPKPATYELERNFGLDVSLFERLILNEIPHVTLKIQHRMRPEISQMVK-LIYPELEDHPSVCQFEHIRGVSKDVFFINHNYHEVG-NSDNFSKSNDHEAKYVVALCEYLTKHDYSPSQITIITTYKGQVTLIRKYMKNLNP-----QPRVSAVDDFQGEENEIIILSLVRSNK 813          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: A0A4D9DPM9_9SAUR (CD276 antigen-like protein n=5 Tax=Testudinoidea TaxID=8486 RepID=A0A4D9DPM9_9SAUR)

HSP 1 Score: 221 bits (563), Expect = 1.400e-62
Identity = 117/232 (50.43%), Postives = 151/232 (65.09%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDKAG 705
            +I MTTT  A+ R L+ +  P  ++VEEAAE+LE H+L C+ P+ +HL+LIGDHQQLRPK   + L +K  + ISLFER+I    PYV L  QHRMRPEI+ LL P  Y++L DH +V+EY  + GV  ++ F  HT  ES   A S S  N++EA  +  L RYL+   YD   VTILT Y GQV QIR     L+ S  +  V V  VDDFQGEEN I++LSLVRS++ G
Sbjct:  809 VIGMTTTGAAKYRKLLQKIQPHTVIVEEAAEILEAHVLTCLTPACKHLILIGDHQQLRPKPADYTLEKKYFLGISLFERMINNQIPYVQLLYQHRMRPEISQLLVPLFYKQLKDHDAVAEYEQIKGVESSVFFIQHTAAESH-SADSESYSNRFEAAFLVSLSRYLLEQGYDESQVTILTPYHGQVLQIR----TLMRSRDMGDVAVHAVDDFQGEENDIVLLSLVRSNREG 1035          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: A0A8D0HP35_SPHPU (Uncharacterized protein n=3 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HP35_SPHPU)

HSP 1 Score: 221 bits (562), Expect = 1.810e-62
Identity = 115/232 (49.57%), Postives = 152/232 (65.52%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDKAG 705
            +I MTTT  A+ R L+    P +++VEEAAE+LE H+L  + P+ QHL+LIGDHQQLRPK   + L +K  + ISLFER++  G PYV L  QHRMRP+I+ LL P  Y+EL DH  V+ Y  + G+ RN+ F  HT  ES  +A+S S  NK+EA+ +A L RYL++  Y    +TILT Y GQV +IR  + N+        V V  VDDFQGEEN I++LSLVRS+  G
Sbjct:  805 VIGMTTTGDAKYRKLLQNLQPRVVIVEEAAEILEAHVLTSLTPACQHLILIGDHQQLRPKPADYTLEKKYFLGISLFERMVNNGIPYVQLLCQHRMRPDISQLLVPFFYKELRDHQVVTTYENIKGLERNVYFIQHTEKESH-NAESESYSNKFEASFLALLSRYLLKQGYQESQITILTPYHGQVLKIRALMNNM-------EVAVHAVDDFQGEENDIVLLSLVRSNSEG 1028          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: A0A7J7KCZ9_BUGNE (ZNFX1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KCZ9_BUGNE)

HSP 1 Score: 205 bits (522), Expect = 3.070e-62
Identity = 106/230 (46.09%), Postives = 158/230 (68.70%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNK-YDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSD 696
            +I MTTT  AR++S++ +  PEI+VVEEAAEVLE HI+  +    +HL+LIGDH+QL+P    +DL ++  +D+SLFER++  G P  TL  QHRMRPE++  +R  IY  L DHPSV     + G+ +++ FF H+ PES  D+ +MS  N++EA MV  L RY +R K Y+   VTI+T Y GQ+  +++++    P    + V++++VD+FQGEEN+I+I+SLVRS+
Sbjct:   23 VIGMTTTGAARMQSVLQQVGPEIVVVEEAAEVLEAHIITALSKHCKHLILIGDHKQLKPNPTVYDLAKQYHLDLSLFERMVNNGLPVKTLNIQHRMRPEVSKYMR-HIYDRLDDHPSVIGRSHVEGITKDVYFFNHSCPESS-DSMTMSHSNEFEADMVVGLTRYFLRQKSYEPSDVTIITMYTGQLLLLKKKM----PKAEFEGVKITSVDNFQGEENKILIISLVRSN 246          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: UPI0013F2756C (NFX1-type zinc finger-containing protein 1-like n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=UPI0013F2756C)

HSP 1 Score: 218 bits (556), Expect = 1.230e-61
Identity = 116/232 (50.00%), Postives = 152/232 (65.52%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDKAG 705
            +I MTTT  A+ R L+ +  P  ++VEEAAE+LE H+L C+ P+ +HL+LIGDHQQLRPK   + L +K  + ISLFER+I    PYV L  QHRMRPEI+ LL P  Y++L DH +V+EY  + GV  ++ F  HT  ES   A S S  N++EA+ +  L RYL+   Y+   VTILT Y GQV +IR  +R    S  +  V V  VDDFQGEEN II+LSLVRS++ G
Sbjct:  893 VIGMTTTGAAKYRKLLQKIQPHTVIVEEAAEILEAHVLTCLTPACKHLILIGDHQQLRPKPADYTLEKKYFLGISLFERMINNQIPYVQLLYQHRMRPEISQLLVPLFYKQLKDHEAVAEYEQIKGVESSVFFIQHTAAESH-SADSESYSNRFEASFLVSLSRYLLEQGYNESQVTILTPYHGQVLKIRMLLR----SRDMGDVAVHAVDDFQGEENDIILLSLVRSNREG 1119          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: A0A2C9K686_BIOGL (Uncharacterized protein n=5 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9K686_BIOGL)

HSP 1 Score: 218 bits (555), Expect = 1.650e-61
Identity = 115/230 (50.00%), Postives = 156/230 (67.83%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDK 699
            +I MTTT  A+ + ++      I++VEEAAEVLE HI+  +  + QHL+LIGDHQQLRPK  +++L R   +D+SLFERLIL   P+VTL  QHRMRPEI+ +++  IY EL DHPSV ++  + GV++++ F  H + E   DA S SK N+ EA  VA L  Y  +  Y    +TI+TTY+GQV  IR+ ++NL P     + R+S VDDFQGEEN IIILSLVRS++
Sbjct:  370 VIGMTTTGAAKYKDILEEVGCNIVIVEEAAEVLESHIVTALSKNCQHLILIGDHQQLRPKPATYELERNFGLDVSLFERLILNEIPHVTLKIQHRMRPEISQMIK-LIYPELEDHPSVCQFEHIRGVSKDVFFINHNYHEVS-DADSFSKSNEHEAKYVAALCEYFTKYDYSPSQLTIITTYKGQVSLIRKYMKNLNP-----QPRISAVDDFQGEENEIIILSLVRSNE 592          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: A0A2R2MIQ9_LINUN (NFX1-type zinc finger-containing protein 1-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MIQ9_LINUN)

HSP 1 Score: 217 bits (553), Expect = 3.050e-61
Identity = 116/235 (49.36%), Postives = 157/235 (66.81%), Query Frame = 1
Query:    1 ENAIIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDKAG 705
            E A+I MTTT  A+ RS++    P+I++VEEAAEVLE HI+  +  S QHL+LIGDH+QLRP    +DL +K  +D+ LFER++  G     L  QHRMRPEIA LLR  IY EL +HPSV +   + GV++N+ F  H++PE   D ++ S+ NK EA  +  L +YL+   Y A  +TILTTY GQ+ Q +R    ++P    + VRVS+VD+FQGEEN II+LSLVRS+  G
Sbjct:  758 EAAVIGMTTTGAAKYRSILQEVQPKIVIVEEAAEVLEAHIVTSLTKSCQHLILIGDHKQLRPTPTVYDLAKKYNLDVCLFERMLNNGMQVNCLQLQHRMRPEIATLLR-HIYPELQNHPSVEDAEDIRGVSKNMFFINHSYPEFK-DGENKSRSNKHEAMFIVALCKYLLLQGYGASQITILTTYTGQLLQFKR----IMPKTTFEGVRVSSVDNFQGEENDIILLSLVRSNTEG 986          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: UPI00148AB1F2 (NFX1-type zinc finger-containing protein 1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AB1F2)

HSP 1 Score: 217 bits (553), Expect = 3.090e-61
Identity = 111/231 (48.05%), Postives = 152/231 (65.80%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPS--FGLDRVRVSTVDDFQGEENRIIILSLVRSD 696
            ++ MTTT  A+   L+ +  P I+VVEEAA+V E HI+ C+   +QHL+LIGDHQQLRP   ++ L +  + D+S+ ERL++ G P+V L+ QHRMRPEI+ LL PTIY+ L DH SV  Y  + G   N+ F  HTHPES  +  S S  N++EA M+ +L RYL+   Y    +TIL+TY  QVK IR  ++NL  +      RV ++ VD+FQGEEN II+LSLVR +
Sbjct: 1007 LVGMTTTGAAQNIDLLRQVQPRIVVVEEAAQVFEQHIIGCLTEGLQHLILIGDHQQLRPPINNYKLSKSHKTDVSMMERLVMNGMPFVCLSQQHRMRPEISSLLTPTIYKTLKDHSSVLNYENVRGFKHNIYFLDHTHPESQTEF-STSHMNEFEAKMIVRLFRYLVLQGYSRTQITILSTYNDQVKLIRDNMKNLTETKDSATQRVTITAVDNFQGEENEIILLSLVRGN 1236          
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Match: UPI001CA919DD (NFX1-type zinc finger-containing protein 1 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI001CA919DD)

HSP 1 Score: 217 bits (552), Expect = 4.230e-61
Identity = 115/232 (49.57%), Postives = 151/232 (65.09%), Query Frame = 1
Query:   10 IIAMTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGDHQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADLLRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNKWEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLDRVRVSTVDDFQGEENRIIILSLVRSDKAG 705
            +I MTTT  A+ R L+ +  P  ++VEEAAE+LE H+L C+ P+ +HL+LIGDHQQLRPK   + L +K  + ISLFER+I    PYV L  QHRMRPEI+ LL P  Y++L DH +V+EY  + GV  ++ F  HT  ES   A S S  N++EA+ +  L RYL+   YD   VT+LT Y GQV +IR  +R       +  V V  VDDFQGEEN II+LSLVRS++ G
Sbjct:  935 VIGMTTTGAAKYRKLLQKIQPHTVIVEEAAEILEAHVLTCLTPACKHLILIGDHQQLRPKPADYTLEKKYFLGISLFERMINNQIPYVQLLYQHRMRPEISRLLVPLFYKQLKDHNAVAEYEKIKGVESSVFFIQHTAAESH-SADSESYRNEFEASFLVSLSRYLLDQGYDQSQVTVLTPYHGQVLKIRTLMRRR----DMGEVAVHAVDDFQGEENDIILLSLVRSNREG 1161          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97608.22486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8C4QBK2_EPTBU1.780e-6449.57Uncharacterized protein n=1 Tax=Eptatretus burgeri... [more]
A0A2C9M9Z9_BIOGL1.060e-6250.00Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A4D9DPM9_9SAUR1.400e-6250.43CD276 antigen-like protein n=5 Tax=Testudinoidea T... [more]
A0A8D0HP35_SPHPU1.810e-6249.57Uncharacterized protein n=3 Tax=Sphenodon punctatu... [more]
A0A7J7KCZ9_BUGNE3.070e-6246.09ZNFX1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0... [more]
UPI0013F2756C1.230e-6150.00NFX1-type zinc finger-containing protein 1-like n=... [more]
A0A2C9K686_BIOGL1.650e-6150.00Uncharacterized protein n=5 Tax=Biomphalaria glabr... [more]
A0A2R2MIQ9_LINUN3.050e-6149.36NFX1-type zinc finger-containing protein 1-like n=... [more]
UPI00148AB1F23.090e-6148.05NFX1-type zinc finger-containing protein 1 n=1 Tax... [more]
UPI001CA919DD4.230e-6149.57NFX1-type zinc finger-containing protein 1 n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97608contigM-pyrifera_M_contig97608:3..707 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score215.7
Seed ortholog evalue2.3e-53
Seed eggNOG ortholog244447.XP_008319359.1
Preferred nameZNFX1
KEGG koko:K21626
Hectar predicted targeting categoryother localisation
GOsGO:0000981,GO:0003674,GO:0003700,GO:0006355,GO:0006357,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.Zinc finger, NFX1-type containing 1
EggNOG OGs38E0G@33154,3BCP1@33208,3CT3Y@33213,4873A@7711,48YFD@7742,49W37@7898,COG1112@1,KOG1807@2759
COG Functional cat.L
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons1
Model size705
Cds size687
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816893.3670073-CDS-M-pyrifera_M_contig97608:2..6891622816893.3670073-CDS-M-pyrifera_M_contig97608:2..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97608 3..689 -
1692278240.7092052-CDS-M-pyrifera_M_contig97608:2..6891692278240.7092052-CDS-M-pyrifera_M_contig97608:2..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97608 3..689 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816893.3811424-UTR-M-pyrifera_M_contig97608:689..7071622816893.3811424-UTR-M-pyrifera_M_contig97608:689..707Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97608 690..707 -
1692278240.726801-UTR-M-pyrifera_M_contig97608:689..7071692278240.726801-UTR-M-pyrifera_M_contig97608:689..707Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97608 690..707 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97608.22486.1prot_M-pyrifera_M_contig97608.22486.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97608 3..689 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97608.22486.1

>prot_M-pyrifera_M_contig97608.22486.1 ID=prot_M-pyrifera_M_contig97608.22486.1|Name=mRNA_M-pyrifera_M_contig97608.22486.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
MTTTAGARLRSLISRANPEIMVVEEAAEVLEGHILACMPPSVQHLLLIGD
HQQLRPKTESFDLRRKKRIDISLFERLILLGYPYVTLTTQHRMRPEIADL
LRPTIYRELYDHPSVSEYPPLAGVARNLVFFGHTHPESGGDAQSMSKHNK
WEATMVAKLGRYLMRNKYDAEHVTILTTYRGQVKQIRREIRNLVPSFGLD
RVRVSTVDDFQGEENRIIILSLVRSDKAG
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mRNA from alignment at M-pyrifera_M_contig97608:3..707-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97608.22486.1 ID=mRNA_M-pyrifera_M_contig97608.22486.1|Name=mRNA_M-pyrifera_M_contig97608.22486.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig97608:3..707- (Macrocystis pyrifera P11B4 male)
GAAAATGCTATCATCGCCATGACAACAACAGCAGGAGCACGGCTACGAAG TTTGATTTCCAGAGCAAATCCTGAGATCATGGTAGTGGAAGAAGCTGCTG AAGTGTTGGAAGGTCACATTCTTGCATGCATGCCACCTTCTGTGCAACAT CTTTTGCTCATTGGGGATCATCAACAGCTGCGGCCGAAAACAGAGTCATT CGACTTGCGAAGGAAGAAGAGGATTGATATATCTTTGTTTGAGAGGCTGA TTCTCTTGGGGTATCCATATGTCACTCTTACAACTCAACATCGTATGCGA CCAGAGATTGCTGATCTCCTTCGTCCAACCATCTATCGAGAACTCTATGA CCATCCCAGCGTATCTGAATACCCTCCATTGGCTGGAGTCGCAAGAAACC TTGTCTTCTTTGGTCATACCCATCCAGAGTCTGGTGGAGATGCACAATCC ATGAGCAAGCACAACAAGTGGGAAGCAACTATGGTGGCAAAGTTGGGGCG ATACTTGATGCGAAACAAGTACGACGCAGAGCATGTGACAATTCTCACGA CGTATCGAGGCCAAGTGAAACAAATTAGGCGCGAAATTCGCAACCTCGTC CCATCATTCGGCCTTGATCGAGTTCGAGTTTCCACTGTAGATGATTTCCA AGGTGAAGAAAACCGCATCATTATCCTGTCACTTGTTCGGTCAGACAAGG CAGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97608:3..707-

>mRNA_M-pyrifera_M_contig97608.22486.1 ID=mRNA_M-pyrifera_M_contig97608.22486.1|Name=mRNA_M-pyrifera_M_contig97608.22486.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig97608:3..707- (Macrocystis pyrifera P11B4 male)
ATGACAACAACAGCAGGAGCACGGCTACGAAGTTTGATTTCCAGAGCAAA
TCCTGAGATCATGGTAGTGGAAGAAGCTGCTGAAGTGTTGGAAGGTCACA
TTCTTGCATGCATGCCACCTTCTGTGCAACATCTTTTGCTCATTGGGGAT
CATCAACAGCTGCGGCCGAAAACAGAGTCATTCGACTTGCGAAGGAAGAA
GAGGATTGATATATCTTTGTTTGAGAGGCTGATTCTCTTGGGGTATCCAT
ATGTCACTCTTACAACTCAACATCGTATGCGACCAGAGATTGCTGATCTC
CTTCGTCCAACCATCTATCGAGAACTCTATGACCATCCCAGCGTATCTGA
ATACCCTCCATTGGCTGGAGTCGCAAGAAACCTTGTCTTCTTTGGTCATA
CCCATCCAGAGTCTGGTGGAGATGCACAATCCATGAGCAAGCACAACAAG
TGGGAAGCAACTATGGTGGCAAAGTTGGGGCGATACTTGATGCGAAACAA
GTACGACGCAGAGCATGTGACAATTCTCACGACGTATCGAGGCCAAGTGA
AACAAATTAGGCGCGAAATTCGCAACCTCGTCCCATCATTCGGCCTTGAT
CGAGTTCGAGTTTCCACTGTAGATGATTTCCAAGGTGAAGAAAACCGCAT
CATTATCCTGTCACTTGTTCGGTCAGACAAGGCAGGTATGACAACAACAG
CAGGAGCACGGCTACGAAGTTTGATTTCCAGAGCAAATCCTGAGATCATG
GTAGTGGAAGAAGCTGCTGAAGTGTTGGAAGGTCACATTCTTGCATGCAT
GCCACCTTCTGTGCAACATCTTTTGCTCATTGGGGATCATCAACAGCTGC
GGCCGAAAACAGAGTCATTCGACTTGCGAAGGAAGAAGAGGATTGATATA
TCTTTGTTTGAGAGGCTGATTCTCTTGGGGTATCCATATGTCACTCTTAC
AACTCAACATCGTATGCGACCAGAGATTGCTGATCTCCTTCGTCCAACCA
TCTATCGAGAACTCTATGACCATCCCAGCGTATCTGAATACCCTCCATTG
GCTGGAGTCGCAAGAAACCTTGTCTTCTTTGGTCATACCCATCCAGAGTC
TGGTGGAGATGCACAATCCATGAGCAAGCACAACAAGTGGGAAGCAACTA
TGGTGGCAAAGTTGGGGCGATACTTGATGCGAAACAAGTACGACGCAGAG
CATGTGACAATTCTCACGACGTATCGAGGCCAAGTGAAACAAATTAGGCG
CGAAATTCGCAACCTCGTCCCATCATTCGGCCTTGATCGAGTTCGAGTTT
CCACTGTAGATGATTTCCAAGGTGAAGAAAACCGCATCATTATCCTGTCA
CTTGTTCGGTCAGACAAGGCAGGT
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