mRNA_M-pyrifera_M_contig97607.22485.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97607.22485.1
Unique NamemRNA_M-pyrifera_M_contig97607.22485.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: A0A1M6UCN6_9BACT (Outer membrane receptor proteins, mostly Fe transport n=4 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6UCN6_9BACT)

HSP 1 Score: 449 bits (1155), Expect = 1.460e-151
Identity = 213/235 (90.64%), Postives = 220/235 (93.62%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            VKFFLDGIPL+Y+GSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINI SRKEY++YLDASYSLGSFNTHKVN NGQY N E HLIAGVNSF+NHSDNNYKVD+EIPDQFGNPEP TVRRFHDQFTNYL+NAYAGVYDK YADRL FSARFSGL DDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILP  ALKWY GVN T GNFVDTT NAYTWDGEVYDRRTDGGE
Sbjct:  176 VKFFLDGIPLSYYGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIKSRKEYINYLDASYSLGSFNTHKVNLNGQYVNSENHLIAGVNSFYNHSDNNYKVDVEIPDQFGNPEPTTVRRFHDQFTNYLVNAYAGVYDKKYADRLVFSARFSGLDDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPRMALKWYGGVNMTSGNFVDTTLNAYTWDGEVYDRRTDGGE 410
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: A0A090VG12_9FLAO (TonB-dependent receptor n=1 Tax=Algibacter lectus TaxID=221126 RepID=A0A090VG12_9FLAO)

HSP 1 Score: 384 bits (987), Expect = 3.160e-132
Identity = 174/235 (74.04%), Postives = 204/235 (86.81%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            + FFLDGIPL+YFGSGLGLNVLP NL+EQIEVYKGVVPVDLGADALGG INI++RK Y DYLD SYS GSFN+HKVN N Q  NP+ H I G++SFFNHSDNNYKVD+EIPD+FGNP PATV RFHD+F+NYL+N Y GVYDK YADRL FSAR+SGL DD+QHNA+MAQPYG+VTYDESTLG S  YEK++++  T +KWY+  N T+G+F+DTT NAYTWDG+++DRRTDGGE
Sbjct:   65 IPFFLDGIPLSYFGSGLGLNVLPANLIEQIEVYKGVVPVDLGADALGGGINIITRKSYSDYLDVSYSGGSFNSHKVNLNTQLVNPDTHWIFGLHSFFNHSDNNYKVDVEIPDEFGNPIPATVNRFHDKFSNYLVNIYTGVYDKDYADRLVFSARYSGLKDDVQHNAIMAQPYGEVTYDESTLGASLEYEKKKVIKKTDIKWYSAYNRTRGHFIDTTLNAYTWDGKIFDRRTDGGE 299
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: A0A285ME12_9FLAO (Outer membrane receptor proteins, mostly Fe transport n=2 Tax=Muricauda parva TaxID=1247520 RepID=A0A285ME12_9FLAO)

HSP 1 Score: 389 bits (1000), Expect = 4.110e-128
Identity = 173/235 (73.62%), Postives = 204/235 (86.81%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            VKFFLDG+PL+Y+GSGLGLNV+PVNLMEQIEVYKGVVPVDLGADALGG INI+ RK Y DYLD SYSLGSFNTHK N NGQY NP+ + + G+NSF+NHSDNNYKVD+EIPD+FGNP PATV+RFHD+F+NYL++ Y GVY+K YADRL  S R+SGL D++QHNA+MAQPYG+VTYDE+TLGFS  YEK E++P+T +KWY GVN TKG+F D + NAYTWDG+VYD R  GGE
Sbjct:  192 VKFFLDGVPLSYYGSGLGLNVIPVNLMEQIEVYKGVVPVDLGADALGGGINIIPRKSYSDYLDISYSLGSFNTHKANINGQYVNPKNNTLLGINSFYNHSDNNYKVDVEIPDEFGNPNPATVKRFHDKFSNYLLSLYTGVYNKSYADRLFISVRYSGLDDEVQHNAIMAQPYGEVTYDENTLGFSVTYEKREVVPNTGIKWYGGVNKTKGHFKDISLNAYTWDGKVYDTRPSGGE 426
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: UPI001FDF4080 (TonB-dependent receptor n=1 Tax=Flexithrix dorotheae TaxID=70993 RepID=UPI001FDF4080)

HSP 1 Score: 387 bits (993), Expect = 3.550e-127
Identity = 179/235 (76.17%), Postives = 204/235 (86.81%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            VKFFLDGIPL YFGSGLGLNVLPVNLMEQIEVYKGVVPV LGADALGGAINIVSR EY  YLDASYS+GSFNTHK N N Q+ NP+ + I+G+NSF+N+SDNNY VD+EIP+ FGNPEPA VRRFHD+++NYL+N YAGV DK YADRL  S R+SGL D+IQHNA+MAQPYG+VTY+EST G S +YEKE+ILP T+L+WY G+N T GNF DTT NAYTWDGE+Y RRTDGGE
Sbjct:  177 VKFFLDGIPLNYFGSGLGLNVLPVNLMEQIEVYKGVVPVHLGADALGGAINIVSRNEYTSYLDASYSVGSFNTHKANLNSQFVNPKNNFISGINSFYNYSDNNYPVDVEIPNAFGNPEPARVRRFHDRYSNYLLNYYAGVIDKTYADRLIISVRYSGLDDEIQHNAIMAQPYGKVTYNESTWGSSIDYEKEQILPKTSLQWYIGMNRTTGNFTDTTLNAYTWDGEIYRRRTDGGE 411
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: UPI001AA16D97 (TonB-dependent receptor n=1 Tax=Polaribacter sp. SM13 TaxID=2818493 RepID=UPI001AA16D97)

HSP 1 Score: 385 bits (990), Expect = 1.580e-126
Identity = 176/235 (74.89%), Postives = 203/235 (86.38%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            V FFLDGIPL+YFGSGLGLNVLP NL+EQIEVYKGVVPVDLGADALGG INI++RK Y DYLDASYS+GSFN+HKVN N Q  NP    + G++SFFNHSDNNYKVD+EIPD+FGNP PATV+RFHD+F+NYL+N Y GVYDK YADRL F+AR+SGL DD+QHNA+MAQPYGQVTYDESTLG S  Y K+ IL  T +KWY+  N T+G+F+DTT NAYTWDG++YDRRTDGGE
Sbjct:  198 VPFFLDGIPLSYFGSGLGLNVLPANLIEQIEVYKGVVPVDLGADALGGGINIITRKSYSDYLDASYSIGSFNSHKVNLNAQLANPNNKWMFGIHSFFNHSDNNYKVDVEIPDEFGNPIPATVKRFHDKFSNYLVNLYTGVYDKDYADRLVFNARYSGLKDDVQHNAIMAQPYGQVTYDESTLGASLEYAKKHILKKTDVKWYSAYNRTRGHFIDTTLNAYTWDGKIYDRRTDGGE 432
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: A0A150XSL6_ROSEK (Cobalamin receptor protein n=2 Tax=Roseivirga ehrenbergii (strain DSM 102268 / JCM 13514 / KCTC 12282 / NCIMB 14502 / KMM 6017) TaxID=279360 RepID=A0A150XSL6_ROSEK)

HSP 1 Score: 379 bits (972), Expect = 3.030e-124
Identity = 174/235 (74.04%), Postives = 200/235 (85.11%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            VKFFLDGIPL+YFGSG+GLNVLPVNLM+QIEVYKGVVPV+LGADALGGAINIV RKEY +YLD +YS GSFN+HK+N NGQ   P+K L+ G+NSF+NHSDNNY VDIEIP++FGNP+PATV RFHD+++N+LIN YAGV DK + DRL  S R SGL DD+QHNAVM+QPYG+  Y E+T GFS  YEKEEILP T LKWY G+N TKG F DTT NAYTWDGE+Y RRTDGGE
Sbjct:  163 VKFFLDGIPLSYFGSGMGLNVLPVNLMKQIEVYKGVVPVNLGADALGGAINIVPRKEYRNYLDVAYSYGSFNSHKLNLNGQLVQPDKGLLVGINSFYNHSDNNYTVDIEIPNEFGNPQPATVERFHDKYSNHLINLYAGVVDKNWTDRLILSLRLSGLDDDVQHNAVMSQPYGEAVYSEATTGFSVEYEKEEILPKTGLKWYGGMNFTKGEFTDTTLNAYTWDGEIYRRRTDGGE 397
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: L8JPU6_9BACT (Outer membrane cobalamin receptor protein n=2 Tax=Fulvivirga TaxID=396811 RepID=L8JPU6_9BACT)

HSP 1 Score: 378 bits (971), Expect = 5.380e-124
Identity = 170/235 (72.34%), Postives = 200/235 (85.11%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            VKFFLDGIPL+YFGSG GLN LPVN+M++IEVYKGVVPVDLGADALGG INI+SRKEY+ Y+DASY+ GSFNTHK+NFNGQ+ NP +++I G++SF+NHSDNNYK+D+EIPD  GNP+PAT RRFHD+FTNYL+N + GV+DK YADRL  S R+SGL DDIQHNA+M+QPYG+ TY+EST G S  YEK+ +LP T LKWY G N T G F DTT NAYTWDG VY RRTDGGE
Sbjct:  166 VKFFLDGIPLSYFGSGFGLNALPVNMMKRIEVYKGVVPVDLGADALGGGINIISRKEYISYMDASYARGSFNTHKLNFNGQWVNPSENVILGLSSFYNHSDNNYKIDVEIPDANGNPQPATARRFHDRFTNYLLNFHGGVFDKKYADRLMVSVRYSGLDDDIQHNAIMSQPYGEATYEESTTGVSLEYEKQSVLPRTDLKWYGGANFTSGYFQDTTLNAYTWDGRVYRRRTDGGE 400
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: A0A3B0BXI9_9FLAO (TonB-dependent receptor n=2 Tax=Ulvibacterium marinum TaxID=2419782 RepID=A0A3B0BXI9_9FLAO)

HSP 1 Score: 374 bits (961), Expect = 1.410e-122
Identity = 170/235 (72.34%), Postives = 200/235 (85.11%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            V FFLDGIPL+Y+GSGLGLNVLP +LM+QIEVYKGVVPV LGADALGG IN+++RK Y +YLDASYS GSFN+HK+N NGQ+ +PEK  + G+NSF+NHSDN+YKVDIEIPD+FGNP PATVRRFHD F+NYL+  Y GV+DK YADRL  S R+SGL DDIQHNA+MAQPYG+VTYDE+T+G S  YEK+EIL  T +KWY   N T+G+FVDTT N YTWDG V+DRRTDGGE
Sbjct:  165 VPFFLDGIPLSYYGSGLGLNVLPASLMDQIEVYKGVVPVHLGADALGGGINVITRKSYKNYLDASYSGGSFNSHKINVNGQWVHPEKQWVIGINSFYNHSDNDYKVDIEIPDEFGNPNPATVRRFHDGFSNYLVGLYGGVFDKTYADRLILSVRYSGLEDDIQHNAIMAQPYGEVTYDEATIGTSLEYEKKEILKKTDVKWYGAYNKTRGHFVDTTLNVYTWDGRVFDRRTDGGE 399
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: A0A0Q1DMV7_9FLAO (Cobalamin receptor protein n=2 Tax=Muricauda eckloniae TaxID=346185 RepID=A0A0Q1DMV7_9FLAO)

HSP 1 Score: 372 bits (955), Expect = 1.060e-121
Identity = 169/235 (71.91%), Postives = 200/235 (85.11%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            V FFLDGIPL+Y+GSGLGLNVLP +LM+QIEVYKGVVPV LGADALGG IN+++RK Y +YLDASYS GSFN+HK+N NGQ+ +PEK    G+NSF+NHSDN+YKVDIEIPD+FGNP PATV+RFHD F+NYL+  Y GV+DK YADRL  S R+SGL DDIQHNA+MAQPYG+VTYDE+T+G S  YEK+EIL +T +KWY   N T G+FVDTT N YTWDG+V+DRRTDGGE
Sbjct:  163 VPFFLDGIPLSYYGSGLGLNVLPASLMDQIEVYKGVVPVHLGADALGGGINVITRKSYKNYLDASYSGGSFNSHKINLNGQWVHPEKQWTIGINSFYNHSDNDYKVDIEIPDEFGNPSPATVKRFHDGFSNYLVGLYGGVFDKTYADRLILSVRYSGLEDDIQHNAIMAQPYGEVTYDEATIGTSLEYEKKEILKNTDMKWYGAYNQTLGHFVDTTLNVYTWDGKVFDRRTDGGE 397
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BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Match: UPI0012BB4B2D (TonB-dependent receptor n=2 Tax=Fulvivirga TaxID=396811 RepID=UPI0012BB4B2D)

HSP 1 Score: 368 bits (945), Expect = 5.450e-120
Identity = 169/235 (71.91%), Postives = 194/235 (82.55%), Query Frame = 1 
Query:    1 VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAINIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHSDNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLTFSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALKWYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE 705
            VKFFLDGIPL+YFGSG GLN LPVN+M++IEVYKGVVPVDLGADALGG INI+SRKEY+ YLDASYS+GSFNTHK NFNGQ+ N EK    G+ SF+NHSDN+YK+D+EIPD  GNP+PA VRRFH++F NYL+N  AGVY+K YADRL  S R+SGL DDIQHNA+M+QPYG+ TY+EST G S  YEK+ ILP T LKWY G N T G F DTT NAYTWDG+   RRTDGGE
Sbjct:  177 VKFFLDGIPLSYFGSGFGLNALPVNMMKRIEVYKGVVPVDLGADALGGGINIISRKEYISYLDASYSVGSFNTHKANFNGQWVNTEKQAFLGIASFYNHSDNDYKIDVEIPDTGGNPQPARVRRFHNKFANYLVNLNAGVYNKSYADRLVLSMRYSGLVDDIQHNAIMSQPYGEATYEESTTGVSLEYEKQSILPRTTLKWYGGANFTSGYFQDTTLNAYTWDGQANYRRTDGGE 411
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97607.22485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M6UCN6_9BACT1.460e-15190.64Outer membrane receptor proteins, mostly Fe transp... [more]
A0A090VG12_9FLAO3.160e-13274.04TonB-dependent receptor n=1 Tax=Algibacter lectus ... [more]
A0A285ME12_9FLAO4.110e-12873.62Outer membrane receptor proteins, mostly Fe transp... [more]
UPI001FDF40803.550e-12776.17TonB-dependent receptor n=1 Tax=Flexithrix dorothe... [more]
UPI001AA16D971.580e-12674.89TonB-dependent receptor n=1 Tax=Polaribacter sp. S... [more]
A0A150XSL6_ROSEK3.030e-12474.04Cobalamin receptor protein n=2 Tax=Roseivirga ehre... [more]
L8JPU6_9BACT5.380e-12472.34Outer membrane cobalamin receptor protein n=2 Tax=... [more]
A0A3B0BXI9_9FLAO1.410e-12272.34TonB-dependent receptor n=2 Tax=Ulvibacterium mari... [more]
A0A0Q1DMV7_9FLAO1.060e-12171.91Cobalamin receptor protein n=2 Tax=Muricauda ecklo... [more]
UPI0012BB4B2D5.450e-12071.91TonB-dependent receptor n=2 Tax=Fulvivirga TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97607contigM-pyrifera_M_contig97607:2..706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score381.3
Seed ortholog evalue3.2e-103
Seed eggNOG ortholog1121904.ARBP01000008_gene3345
KEGG koko:K16089
KEGG TC1.B.14.1,1.B.14.10
Hectar predicted targeting categoryother localisation
EggNOG free text desc.TonB-dependent Receptor Plug Domain
EggNOG OGs47YHJ@768503,4PKFM@976,COG1629@1,COG4771@2
COG Functional cat.P
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size705
Cds size705
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816893.3341777-CDS-M-pyrifera_M_contig97607:1..7061622816893.3341777-CDS-M-pyrifera_M_contig97607:1..706Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97607 2..706 -
1692278240.689476-CDS-M-pyrifera_M_contig97607:1..7061692278240.689476-CDS-M-pyrifera_M_contig97607:1..706Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97607 2..706 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97607.22485.1prot_M-pyrifera_M_contig97607.22485.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97607 2..706 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97607.22485.1

>prot_M-pyrifera_M_contig97607.22485.1 ID=prot_M-pyrifera_M_contig97607.22485.1|Name=mRNA_M-pyrifera_M_contig97607.22485.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp
VKFFLDGIPLTYFGSGLGLNVLPVNLMEQIEVYKGVVPVDLGADALGGAI
NIVSRKEYVDYLDASYSLGSFNTHKVNFNGQYTNPEKHLIAGVNSFFNHS
DNNYKVDIEIPDQFGNPEPATVRRFHDQFTNYLINAYAGVYDKMYADRLT
FSARFSGLGDDIQHNAVMAQPYGQVTYDESTLGFSANYEKEEILPHTALK
WYAGVNTTKGNFVDTTRNAYTWDGEVYDRRTDGGE
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mRNA from alignment at M-pyrifera_M_contig97607:2..706-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97607.22485.1 ID=mRNA_M-pyrifera_M_contig97607.22485.1|Name=mRNA_M-pyrifera_M_contig97607.22485.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig97607:2..706- (Macrocystis pyrifera P11B4 male)
GTTAAGTTTTTTCTGGATGGAATTCCGCTTACCTATTTTGGCTCAGGTCT
GGGTTTGAACGTTTTGCCCGTCAACCTGATGGAGCAAATCGAAGTATACA
AAGGGGTTGTTCCAGTTGATTTGGGTGCTGATGCATTAGGGGGAGCAATT
AATATTGTATCTAGAAAGGAGTATGTTGATTACCTTGATGCATCCTATTC
GCTTGGCTCCTTCAACACGCATAAAGTCAACTTTAATGGTCAGTACACAA
ATCCAGAAAAACATTTAATTGCCGGAGTCAACTCGTTCTTTAATCATTCG
GACAATAATTATAAGGTAGACATAGAAATTCCTGATCAGTTTGGCAACCC
CGAACCAGCCACCGTCAGGCGGTTTCACGATCAATTCACCAACTACTTGA
TTAATGCGTATGCAGGCGTTTATGACAAAATGTATGCTGATCGCCTGACT
TTCAGTGCCCGCTTTTCAGGGCTTGGCGATGATATCCAGCACAATGCCGT
GATGGCACAACCCTATGGTCAGGTTACTTATGATGAATCTACATTGGGCT
TTTCTGCCAATTACGAAAAGGAAGAAATTTTGCCCCACACAGCACTCAAG
TGGTATGCAGGGGTTAATACGACCAAGGGCAACTTCGTAGACACCACGCG
CAATGCCTATACATGGGATGGCGAGGTATATGACAGACGAACGGATGGAG
GAGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97607:2..706-

>mRNA_M-pyrifera_M_contig97607.22485.1 ID=mRNA_M-pyrifera_M_contig97607.22485.1|Name=mRNA_M-pyrifera_M_contig97607.22485.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1410bp|location=Sequence derived from alignment at M-pyrifera_M_contig97607:2..706- (Macrocystis pyrifera P11B4 male)
GTTAAGTTTTTTCTGGATGGAATTCCGCTTACCTATTTTGGCTCAGGTCT
GGGTTTGAACGTTTTGCCCGTCAACCTGATGGAGCAAATCGAAGTATACA
AAGGGGTTGTTCCAGTTGATTTGGGTGCTGATGCATTAGGGGGAGCAATT
AATATTGTATCTAGAAAGGAGTATGTTGATTACCTTGATGCATCCTATTC
GCTTGGCTCCTTCAACACGCATAAAGTCAACTTTAATGGTCAGTACACAA
ATCCAGAAAAACATTTAATTGCCGGAGTCAACTCGTTCTTTAATCATTCG
GACAATAATTATAAGGTAGACATAGAAATTCCTGATCAGTTTGGCAACCC
CGAACCAGCCACCGTCAGGCGGTTTCACGATCAATTCACCAACTACTTGA
TTAATGCGTATGCAGGCGTTTATGACAAAATGTATGCTGATCGCCTGACT
TTCAGTGCCCGCTTTTCAGGGCTTGGCGATGATATCCAGCACAATGCCGT
GATGGCACAACCCTATGGTCAGGTTACTTATGATGAATCTACATTGGGCT
TTTCTGCCAATTACGAAAAGGAAGAAATTTTGCCCCACACAGCACTCAAG
TGGTATGCAGGGGTTAATACGACCAAGGGCAACTTCGTAGACACCACGCG
CAATGCCTATACATGGGATGGCGAGGTATATGACAGACGAACGGATGGAG
GAGAGGTTAAGTTTTTTCTGGATGGAATTCCGCTTACCTATTTTGGCTCA
GGTCTGGGTTTGAACGTTTTGCCCGTCAACCTGATGGAGCAAATCGAAGT
ATACAAAGGGGTTGTTCCAGTTGATTTGGGTGCTGATGCATTAGGGGGAG
CAATTAATATTGTATCTAGAAAGGAGTATGTTGATTACCTTGATGCATCC
TATTCGCTTGGCTCCTTCAACACGCATAAAGTCAACTTTAATGGTCAGTA
CACAAATCCAGAAAAACATTTAATTGCCGGAGTCAACTCGTTCTTTAATC
ATTCGGACAATAATTATAAGGTAGACATAGAAATTCCTGATCAGTTTGGC
AACCCCGAACCAGCCACCGTCAGGCGGTTTCACGATCAATTCACCAACTA
CTTGATTAATGCGTATGCAGGCGTTTATGACAAAATGTATGCTGATCGCC
TGACTTTCAGTGCCCGCTTTTCAGGGCTTGGCGATGATATCCAGCACAAT
GCCGTGATGGCACAACCCTATGGTCAGGTTACTTATGATGAATCTACATT
GGGCTTTTCTGCCAATTACGAAAAGGAAGAAATTTTGCCCCACACAGCAC
TCAAGTGGTATGCAGGGGTTAATACGACCAAGGGCAACTTCGTAGACACC
ACGCGCAATGCCTATACATGGGATGGCGAGGTATATGACAGACGAACGGA
TGGAGGAGAG
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