prot_M-pyrifera_M_contig97600.22483.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97600.22483.1
Unique Nameprot_M-pyrifera_M_contig97600.22483.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A7S4I2J4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I2J4_9EUKA)

HSP 1 Score: 143 bits (360), Expect = 1.200e-41
Identity = 75/127 (59.06%), Postives = 94/127 (74.02%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEG-----KGCVLVTKKKSSAARRSPASAHNRT-FELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 121
            MS ELTWQLI+KHN F+ RRDG  F++EPNNL NK++FK+SGLAN   VGV+ N +      KGCVL TK + S+ RR PA   NRT F+ +   RVA+ IK+ETQGK YR DLT+AALARWS+I++
Sbjct:    1 MSSELTWQLIRKHNCFITRRDGATFTSEPNNLMNKHAFKWSGLANKDAVGVDFNRDANGNVTKGCVLSTKSRKSSLRRQPAKTWNRTTFKTSDFRRVAKAIKSETQGKYYRRDLTNAALARWSQINR 127          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1XV27_9FUNG (Ribosomal protein L28 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XV27_9FUNG)

HSP 1 Score: 112 bits (280), Expect = 2.190e-29
Identity = 63/119 (52.94%), Postives = 78/119 (65.55%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 119
            MS +LTW L+K ++SFL++R+GV F+TEPNNLTN NSFKYSGLANN  VGV     GKG VL TKK+S +A + P+ +  +T     S R A+ I   T    YR DL  AAL R S I
Sbjct:    1 MSADLTWLLVKDNSSFLVKRNGVQFTTEPNNLTNLNSFKYSGLANNKVVGVTAAPSGKGVVLTTKKQSVSATK-PSKSFQKTSVSGSSRRAAKVIVNSTARSGYRADLRKAALGRLSAI 118          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1Z5T5_9FUNG (Putative ribosomal protein L28 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z5T5_9FUNG)

HSP 1 Score: 110 bits (275), Expect = 1.250e-28
Identity = 62/119 (52.10%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 119
            MS +LTW L+K ++SFL++R GV F+TEPNNLTN NSFKYSGLAN   VGVE N  GKG VL TKK+S ++ + P  +  +      S R A++I   T    YR DL  AAL R S I
Sbjct:    1 MSADLTWLLVKDNSSFLVKRSGVQFTTEPNNLTNLNSFKYSGLANAKVVGVEANASGKGVVLTTKKQSVSSGK-PGKSFQKVAISGSSRRAAKSIVNATARSGYRADLRKAALGRLSAI 118          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1X9A3_9FUNG (60S ribosomal protein l28 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1X9A3_9FUNG)

HSP 1 Score: 110 bits (274), Expect = 1.780e-28
Identity = 62/119 (52.10%), Postives = 76/119 (63.87%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 119
            MS +LTW L+K ++SFL++R+GV F+TEPNNLTN NSFKYSGLAN    G+  N  GKG VL TKK++ +A + PA +  R      S R AR I   T    YR DL  AAL R S I
Sbjct:    1 MSADLTWLLVKDNSSFLVKRNGVQFTTEPNNLTNLNSFKYSGLANTKAFGISANPSGKGVVLSTKKQAVSASK-PAKSSQRVAISGSSRRAARAIVNATARSGYRADLRKAALGRLSAI 118          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1D1ZMD1_9ARAE (60S ribosomal protein L28 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZMD1_9ARAE)

HSP 1 Score: 101 bits (252), Expect = 4.470e-25
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 121
            MS +L WQL+K  +SFL++R+G  F++EPNNLTN NSFKYSGLAN   +G+      +G  +VTKK ++ A   PA A N+     G  R A++  A+    +YR DL  AALAR S + Q
Sbjct:    1 MSDDLIWQLLKSRSSFLVKRNGAEFNSEPNNLTNLNSFKYSGLANKKAIGITTGPNNRGVTVVTKK-TNVAYYKPAKAINKVTLSKGIRRSAKSFTAQFTKSHYRPDLRKAALARISAVYQ 120          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A9UDT8_9BILA (60S ribosomal protein L28 (Fragment) n=1 Tax=Flustra foliacea TaxID=478208 RepID=A9UDT8_9BILA)

HSP 1 Score: 100 bits (248), Expect = 9.790e-25
Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNR-TFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKI 119
            MS  L W +I+K++SFL++R+ VL++ EPNNL   NSF+++GL    TVGVE N +GKG  LVTK K S     PA  +NR   +   S R  +TI    +G+ YR DL SAAL R S I
Sbjct:    1 MSSALQWSIIRKNSSFLLKRNDVLYTKEPNNLRGINSFRFNGLVQEKTVGVEANADGKGVTLVTKNKKS---NQPAKNYNRIALKKNNSRRAFKTIMKTLKGQGYRKDLQSAALRRASTI 117          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A1Y1YJU1_9FUNG (Ribosomal protein L28e n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YJU1_9FUNG)

HSP 1 Score: 99.8 bits (247), Expect = 1.390e-24
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDL 108
            MS +LTW L+K ++SFL++R+GV F+TEPNNLTN NSFKYSGLANN  VGV  +  GKG VL TKK+S +A + PA A N+      S R A+ I        YR DL
Sbjct:    1 MSADLTWLLVKDNSSFLVKRNGVQFTTEPNNLTNLNSFKYSGLANNKVVGVAAS--GKGVVLTTKKQSVSAAK-PAKAFNKVTISGSSRRSAKVIANSIARSGYRADL 105          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A7S0L8E0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0L8E0_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 2.670e-24
Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIR-RDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 121
            MS  L WQ+I+ ++ FL++ R+GV FS+EPNNLT  NSFK+SGLAN+  VGV  N +G G  L  K K  +  + PA A  +        R A+TI   T G +YR DL +AALAR++ I++
Sbjct:    1 MSASLVWQIIRNNSCFLVKQRNGVSFSSEPNNLTKINSFKFSGLANDRVVGVNANADG-GVTLAVKSKKKSKTQKPAKAFTKIVLKKDFRRTAKTIINNTSGNHYRSDLKAAALARYTAIAK 121          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A397TK07_9GLOM (Ribosomal L28e/Mak16 n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TK07_9GLOM)

HSP 1 Score: 99.0 bits (245), Expect = 5.240e-24
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEIN-TEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQGKNYRGDLTSAALARWSKISQ 121
            MS +LTW LIK  +SFL++R+G  F++EPNNLTN NSFKYSGLAN   +GV+   T  KG  +VTKK + A+ + PA + N+     G  + A++  ++    +YR DL  AALAR S I Q
Sbjct:    1 MSDDLTWLLIKNRSSFLVKRNGAEFNSEPNNLTNLNSFKYSGLANKKAIGVKDGPTNYKGVTVVTKKTNVASYK-PAKSINKVILTKGVRKSAKSFTSQFTKSHYRPDLRKAALARISAIYQ 121          
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Match: A0A433D7L2_9FUNG (Ribosomal protein L28e n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D7L2_9FUNG)

HSP 1 Score: 98.2 bits (243), Expect = 1.080e-23
Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    1 MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVGVEINTEGKGCVLVTKKKSSAARRSPASAHN---RTFELT---GSSRVARTIKAETQGKNYRGDLTSAALARWSKISQI 122
            MS +L W L+K +N++L++R GV FS+EP NLTN N+FKYSGLANN TVGV     GKG  L+TKK+         SAHN   R  ++T   GS R A ++        YR DL  A++A  +++S I
Sbjct:    1 MSADLVWSLVKNNNAYLVKRPGVQFSSEPGNLTNLNTFKYSGLANNKTVGVVPAVSGKGIELITKKQK-------LSAHNVNKRVNKITIAKGSRRTALSVANIVARNGYRPDLRQASIAALARVSAI 121          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97600.22483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I2J4_9EUKA1.200e-4159.06Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A1Y1XV27_9FUNG2.190e-2952.94Ribosomal protein L28 n=1 Tax=Basidiobolus meristo... [more]
A0A1Y1Z5T5_9FUNG1.250e-2852.10Putative ribosomal protein L28 n=1 Tax=Basidiobolu... [more]
A0A1Y1X9A3_9FUNG1.780e-2852.1060S ribosomal protein l28 n=1 Tax=Basidiobolus mer... [more]
A0A1D1ZMD1_9ARAE4.470e-2546.2860S ribosomal protein L28 n=1 Tax=Anthurium amnico... [more]
A9UDT8_9BILA9.790e-2547.5060S ribosomal protein L28 (Fragment) n=1 Tax=Flust... [more]
A0A1Y1YJU1_9FUNG1.390e-2453.70Ribosomal protein L28e n=1 Tax=Basidiobolus merist... [more]
A0A7S0L8E0_9EUKA2.670e-2445.90Hypothetical protein (Fragment) n=2 Tax=Eukaryota ... [more]
A0A397TK07_9GLOM5.240e-2447.54Ribosomal L28e/Mak16 n=1 Tax=Glomus cerebriforme T... [more]
A0A433D7L2_9FUNG1.080e-2345.31Ribosomal protein L28e n=1 Tax=Jimgerdemannia flam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.390.110coord: 2..125
e-value: 3.1E-40
score: 139.3
NoneNo IPR availablePANTHERPTHR10544:SF060S RIBOSOMAL PROTEIN L28coord: 1..123
IPR029004Ribosomal L28e/Mak16PFAMPF01778Ribosomal_L28ecoord: 5..121
e-value: 2.6E-31
score: 108.8
IPR002672Ribosomal protein L28ePANTHERPTHR1054460S RIBOSOMAL PROTEIN L28coord: 1..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97600contigM-pyrifera_M_contig97600:82..565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97600.22483.1mRNA_M-pyrifera_M_contig97600.22483.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97600 82..565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97600.22483.1 ID=prot_M-pyrifera_M_contig97600.22483.1|Name=mRNA_M-pyrifera_M_contig97600.22483.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
MSQELTWQLIKKHNSFLIRRDGVLFSTEPNNLTNKNSFKYSGLANNSTVG
VEINTEGKGCVLVTKKKSSAARRSPASAHNRTFELTGSSRVARTIKAETQ
GKNYRGDLTSAALARWSKISQIKSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029004L28e/Mak16
IPR002672Ribosomal_L28e