prot_M-pyrifera_M_contig110666.2245.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig110666.2245.1
Unique Name	prot_M-pyrifera_M_contig110666.2245.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	107

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: A0A7S2MSY2_9DINO (Transmembrane 9 superfamily member n=2 Tax=Alexandrium TaxID=2924 RepID=A0A7S2MSY2_9DINO)

HSP 1 Score: 106 bits (265), Expect = 1.210e-24
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 0

Query:   19 AAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVLT 107
            A+  YLPGVAP+EY EG +V + VNK+ S KTQ+PYRY +LP C P    +  ENLGEIL GD+IE+S YVVRM +++ C VLC++ L+
Sbjct:   18 ASAFYLPGVAPIEYLEGGQVDLKVNKLTSVKTQLPYRYYTLPYCVPSVVQESAENLGEILEGDQIENSPYVVRMLQNESCKVLCKKALS 106

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: A0A7S3RYC6_9SPIT (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RYC6_9SPIT)

HSP 1 Score: 97.8 bits (242), Expect = 2.260e-24
Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 0

Query:   23 YLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVL 106
            YLPGVAP E+ +G RV + VNK+ S KTQ+PYRY  LP CQP       ENLGEIL+GD IE+S Y +RM  +  CS +C R L
Sbjct:   14 YLPGVAPQEFAQGDRVDLKVNKLTSVKTQLPYRYYVLPYCQPSELHVSAENLGEILLGDSIENSMYDIRMNVNASCSFMCERTL 97

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: A0A7S2BHR4_9STRA (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHR4_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.590e-24
Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 0

Query:    8 VLLVAAYVEYVAAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRR 104
            VLL A  V    A  YLPGVAP  Y+   +VP++VNKV S KTQ+PY Y  LP C PK   + +ENLGE+L GD I+SS Y + MK    C +LCR+
Sbjct:    5 VLLAAVLVPLAEAAFYLPGVAPKSYKTRDQVPLFVNKVTSTKTQLPYAYYDLPFCMPKRPKEASENLGEVLEGDMIKSSLYEIEMKVPDACKILCRK 101

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: A0A813JG54_POLGL (Transmembrane 9 superfamily member n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JG54_POLGL)

HSP 1 Score: 105 bits (262), Expect = 3.130e-24
Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 0

Query:   23 YLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVLT 107
            YLPGVAP+EYQ+G RV + VNK+ S KTQ+PY Y +LP C+PK      ENLGEIL GD IE+S Y +RM+E+  C +LC++ LT
Sbjct:   30 YLPGVAPIEYQDGARVELKVNKLTSVKTQLPYGYYTLPYCRPKVIQDSVENLGEILEGDLIENSPYDIRMRENVICKILCKQKLT 114

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: Q5ENL8_HETTR (Transmembrane 9 superfamily member (Fragment) n=3 Tax=Alveolata TaxID=33630 RepID=Q5ENL8_HETTR)

HSP 1 Score: 100 bits (248), Expect = 4.120e-24
Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 0

Query:    9 LLVAAYVEYVAAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKET-ENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVLT 107
            L +A+ V   A   YLPGVAP+EYQ+G RV + VNK+ S KTQ+PY Y SLP C+P    +++ ENLGEIL GD IE+S Y + M+ ++ C VLC + LT
Sbjct:    6 LAIASAVSAPALGFYLPGVAPIEYQDGNRVDLKVNKLTSVKTQLPYAYYSLPYCKPNEGIQDSVENLGEILEGDLIENSPYEIFMRVNETCKVLCNQNLT 105

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: A0A446UJT8_TRITD (Transmembrane 9 superfamily member n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446UJT8_TRITD)

HSP 1 Score: 99.8 bits (247), Expect = 5.290e-24
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0

Query:   19 AAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVLT 107
            AA  YLPGVAP ++ +G  + + VNK+ S KTQ+PY Y SLP C+P      +ENLGE+L GDRIE+S YV +M+E K C ++C+  +T
Sbjct:   26 AAAFYLPGVAPTDFAKGDELLVKVNKLTSIKTQLPYTYYSLPFCKPNTIVDSSENLGEVLRGDRIENSPYVFQMREPKMCQIICKITVT 114

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: A0A6J0MGV8_RAPSA (Transmembrane 9 superfamily member n=2 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0MGV8_RAPSA)

HSP 1 Score: 104 bits (260), Expect = 5.880e-24
Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 0

Query:   17 YVAAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVL 106
            +VA   YLPGVAP ++++G  + + VNK+ S KTQ+PY Y SLP CQPK     TENLGE+L GDRIE++ Y  +M+E K C+VLCR VL
Sbjct:   19 HVAHSFYLPGVAPQDFEKGDELKVKVNKLSSIKTQLPYSYYSLPFCQPKKIVDSTENLGEVLRGDRIENAPYSFKMREAKMCNVLCRVVL 108

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: M4EIE8_BRARP (Transmembrane 9 superfamily member n=1 Tax=Brassica rapa subsp. pekinensis TaxID=51351 RepID=M4EIE8_BRARP)

HSP 1 Score: 103 bits (257), Expect = 1.500e-23
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 0

Query:   17 YVAAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVL 106
            +VA   YLPGVAP ++++G  + + VNK+ S KTQ+PY Y SLP CQPK     TENLGE+L GDRIE++ Y  +M+E K C+VLCR  L
Sbjct:   19 HVAHSFYLPGVAPQDFEKGDELKVKVNKLTSIKTQLPYSYYSLPFCQPKKIVDSTENLGEVLRGDRIENAPYSFKMREAKMCNVLCRVTL 108

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: A0A0D3AIH6_BRAOL (Transmembrane 9 superfamily member n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3AIH6_BRAOL)

HSP 1 Score: 103 bits (257), Expect = 1.500e-23
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 0

Query:   17 YVAAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVL 106
            +VA   YLPGVAP ++++G  + + VNK+ S KTQ+PY Y SLP CQPK     TENLGE+L GDRIE++ Y  +M+E K C+VLCR  L
Sbjct:   19 HVAHSFYLPGVAPQDFEKGDELKVKVNKLTSIKTQLPYSYYSLPFCQPKKIVDSTENLGEVLRGDRIENAPYSFKMREAKMCNVLCRVTL 108

[Close]

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Match: UPI0006A704EF (transmembrane 9 superfamily member 8 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A704EF)

HSP 1 Score: 103 bits (257), Expect = 1.500e-23
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 0

Query:   17 YVAAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKTQIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSVLCRRVL 106
            +VA   YLPGVAP ++++G  + + VNK+ S KTQ+PY Y SLP CQPK     TENLGE+L GDRIE++ Y  +M+E K C+VLCR  L
Sbjct:   20 HVAHSFYLPGVAPQDFEKGDELKVKVNKLTSIKTQLPYSYYSLPFCQPKKIVDSTENLGEVLRGDRIENAPYSFKMREAKMCNVLCRVTL 109

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig110666.2245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2MSY2_9DINO	1.210e-24	56.18	Transmembrane 9 superfamily member n=2 Tax=Alexand...	[more]
A0A7S3RYC6_9SPIT	2.260e-24	55.95	Transmembrane 9 superfamily member (Fragment) n=1 ...	[more]
A0A7S2BHR4_9STRA	2.590e-24	51.55	Transmembrane 9 superfamily member (Fragment) n=1 ...	[more]
A0A813JG54_POLGL	3.130e-24	57.65	Transmembrane 9 superfamily member n=3 Tax=Polarel...	[more]
Q5ENL8_HETTR	4.120e-24	52.00	Transmembrane 9 superfamily member (Fragment) n=3 ...	[more]
A0A446UJT8_TRITD	5.290e-24	50.56	Transmembrane 9 superfamily member n=1 Tax=Triticu...	[more]
A0A6J0MGV8_RAPSA	5.880e-24	55.56	Transmembrane 9 superfamily member n=2 Tax=Raphanu...	[more]
M4EIE8_BRARP	1.500e-23	54.44	Transmembrane 9 superfamily member n=1 Tax=Brassic...	[more]
A0A0D3AIH6_BRAOL	1.500e-23	54.44	Transmembrane 9 superfamily member n=1 Tax=Brassic...	[more]
UPI0006A704EF	1.500e-23	54.44	transmembrane 9 superfamily member 8 n=1 Tax=Brass...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004240	Nonaspanin (TM9SF)	PFAM	PF02990	EMP70	coord: 53..106 e-value: 4.4E-14 score: 52.0
IPR004240	Nonaspanin (TM9SF)	PANTHER	PTHR10766	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	coord: 6..104
None	No IPR available	PANTHER	PTHR10766:SF55	TRANSMEMBRANE 9 SUPERFAMILY MEMBER 4	coord: 6..104
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..107
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..20
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.861
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig110666	contig	M-pyrifera_M_contig110666:48..580 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig110666.2245.1	mRNA_M-pyrifera_M_contig110666.2245.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig110666 30..580 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig110666.2245.1 ID=prot_M-pyrifera_M_contig110666.2245.1|Name=mRNA_M-pyrifera_M_contig110666.2245.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
MRLGLVCVLLVAAYVEYVAAVMYLPGVAPVEYQEGQRVPIWVNKVLSAKT
QIPYRYNSLPVCQPKHATKETENLGEILVGDRIESSDYVVRMKEDKYCSV
LCRRVLT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004240	EMP70