mRNA_M-pyrifera_M_contig97499.22453.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A831W569_9GAMM (DNA helicase (Fragment) n=1 Tax=Methylothermaceae bacterium TaxID=2268196 RepID=A0A831W569_9GAMM) HSP 1 Score: 357 bits (916), Expect = 4.500e-118 Identity = 172/235 (73.19%), Postives = 194/235 (82.55%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEEHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LA+LTGDEQKAVKT+AFDLQLNP NPGM FHKL+ ARD NFWS+RVNRD+R+IVH++ +SLLLCYVDHHDKAYQWAERR+LETHPKTGAAQ VEIRE V+EI VP YV + LF V++D LLG+GVP +WL DVRR DED LLE+ADHLP EAAEALLELATGG P+ A PFEHPDAQRRFRVM +ADEL ALEYPWEKWT+FLHPAQR++VEKD Sbjct: 9 FTDSLARLTGDEQKAVKTTAFDLQLNPANPGMSFHKLDRARDKNFWSIRVNRDLRIIVHKTESSLLLCYVDHHDKAYQWAERRRLETHPKTGAAQLVEIRETVREITVPVYVEKPEKVTANPGLFAAVADDTLLGYGVPPDWLDDVRRVDEDGLLELADHLPAEAAEALLELATGGTPEI-ATPAAGVSPFEHPDAQRRFRVMTDADELARALEYPWEKWTIFLHPAQRELVEKD 242
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A7V1AL73_9BACT (DNA helicase n=2 Tax=Bacteria TaxID=2 RepID=A0A7V1AL73_9BACT) HSP 1 Score: 360 bits (925), Expect = 5.240e-118 Identity = 173/235 (73.62%), Postives = 200/235 (85.11%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEEHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LAKLTGDEQKAVKT+AFDLQ+NP NPGMQFHKL+ A+D NFWSVRV+RDIRLIVH++ +SLLLCYVDHHD AYQWAERRKLETHPKTGAAQ VEIRE V+E+ +P YV EE SA TK+ LF ++ ED+LL +GVP+EWL VR A+ED +LE+ADHLP EAAEALLELATGG+PQ DPF+HPDAQRRFRVM+N +EL ALEYPWEKWTVFLHPAQ+ +VEK+ Sbjct: 9 FTDSLAKLTGDEQKAVKTTAFDLQINPANPGMQFHKLDNAKDKNFWSVRVSRDIRLIVHKTESSLLLCYVDHHDNAYQWAERRKLETHPKTGAAQLVEIRETVKEVTIPKYVEEEQSAQTKLPLFTDIPEDDLLSYGVPSEWLGAVREANEDTVLELADHLPQEAAEALLELATGGQPQMTQPVYENVDPFDHPDAQRRFRVMSNVEELERALEYPWEKWTVFLHPAQQQLVEKE 243
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A7C3H4Y9_9GAMM (DNA helicase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C3H4Y9_9GAMM) HSP 1 Score: 347 bits (890), Expect = 1.090e-117 Identity = 168/237 (70.89%), Postives = 195/237 (82.28%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEEHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQ--RPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LA+LTGDEQKAVKT+AFDLQ+NP NPGM FHKL+ +D +FWSVRV+RD+R+IVH++ +SLLLCYVDHHDKAYQWAERR+LETHPKTGAAQ VEIRE VQEI VP YV + + K LF ++ ++ LL +GVP +WL DVRR DED LLE+ADHLP EAAEALLELATGG P+ P IG PFEHPDAQRRFRVM + DEL ALEYPWEKWT+FLHPAQR++VEKD Sbjct: 9 FTDSLARLTGDEQKAVKTTAFDLQMNPANPGMSFHKLDRVKDKHFWSVRVSRDLRIIVHKTESSLLLCYVDHHDKAYQWAERRRLETHPKTGAAQLVEIRETVQEITVPVYVEKPETVAEKPVLFASLDDETLLSYGVPPDWLDDVRRVDEDGLLELADHLPAEAAEALLELATGGTPEVVSPPTGIG---PFEHPDAQRRFRVMTDTDELARALEYPWEKWTIFLHPAQRELVEKD 242
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A496X1Q0_9GAMM (DNA helicase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496X1Q0_9GAMM) HSP 1 Score: 354 bits (908), Expect = 2.240e-117 Identity = 178/244 (72.95%), Postives = 198/244 (81.15%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAE----EHSAPTKVA-----LFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LAKLTGDEQK VKT+AFDLQLNP NPGMQFHKL+ A+DPNFWSVRV+RDIRLIVH++ ++LLLCYV HHDKAYQWAERRKLETHPKTGAAQ VE+RE V+EI VP YVA PT+V LF S+DELL +GVPAEWL DVR ADED +L +ADHLP EAAEALLELATGG PQ + I +ADPFEHPDAQRRFRVM NA+EL AL+YPWEKWT+FLHP QR VEKD Sbjct: 9 FTDSLAKLTGDEQKQVKTTAFDLQLNPANPGMQFHKLDRAKDPNFWSVRVSRDIRLIVHKNDSNLLLCYVGHHDKAYQWAERRKLETHPKTGAAQLVEVREMVREITVPHYVAAIDIPAEQIPTQVPSQKPYLFAESSDDELLSYGVPAEWLDDVRAADEDSVLNLADHLPAEAAEALLELATGGTPQITQLVIVSADPFEHPDAQRRFRVMTNAEELERALDYPWEKWTIFLHPTQRQWVEKD 252
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A259EEQ1_9PROT (DNA helicase n=1 Tax=Hydrogenophilales bacterium 17-64-11 TaxID=1970526 RepID=A0A259EEQ1_9PROT) HSP 1 Score: 358 bits (919), Expect = 3.840e-117 Identity = 171/235 (72.77%), Postives = 198/235 (84.26%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEEHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LAKLTGDEQK VKT+AFDLQ+NP NPGM FHKL+ ARD NFWSVRV+ DIRLIVH++A+SLLLCYVDHHDKAY+WAERRKLE HP TGAAQ VEIRE V+EI++P YV E AP K LF++V+E+ LL +GVP EWL DVR+ADED LLE+ADHLPGEAAEALLELATGG+P+ P A +PF+HPDAQRRFRVM+N +EL AL++PWEKWTVFLHP QR VE+D Sbjct: 9 FTDSLAKLTGDEQKGVKTTAFDLQMNPANPGMSFHKLDQARDKNFWSVRVSSDIRLIVHKTASSLLLCYVDHHDKAYEWAERRKLEAHPTTGAAQLVEIRETVREISIPKYVEVEREAPAKPRLFDHVAEETLLSYGVPVEWLPDVRQADEDSLLELADHLPGEAAEALLELATGGKPRVPQPVAAADNPFDHPDAQRRFRVMSNVEELQRALDFPWEKWTVFLHPEQRQWVERD 243
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: UPI0004B3D751 (UvrD-helicase domain-containing protein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=UPI0004B3D751) HSP 1 Score: 357 bits (917), Expect = 9.200e-117 Identity = 176/240 (73.33%), Postives = 198/240 (82.50%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAE-----EHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LAKLTG+EQK VKT+AFDLQLNP NPGMQFHKL+ A+DPNFWSVRV+RDIRLIVH++ SLLLCYV+HHDKAYQWAERRKLETHPKTGAAQ VE+RE V+EI VP YVA+ + P K LF ++S+D LL +GVPAEWL DVR ADED +LE+ADHLPGEAAEALLELATGG P +ADPFEHPDAQRRFRVM N +EL AL+YPWEKWT+FLHPAQR VEKD Sbjct: 9 FTDSLAKLTGEEQKNVKTTAFDLQLNPANPGMQFHKLDRAKDPNFWSVRVSRDIRLIVHKTEKSLLLCYVNHHDKAYQWAERRKLETHPKTGAAQIVEVREMVREITVPKYVAQIDVPVDEPTPLKPLLFADISDDNLLSYGVPAEWLDDVRSADEDSVLELADHLPGEAAEALLELATGGIPHIAQPVSVSADPFEHPDAQRRFRVMKNVEELERALDYPWEKWTIFLHPAQRQWVEKD 248
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A160URX2_9BRAD (DNA helicase n=4 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A160URX2_9BRAD) HSP 1 Score: 355 bits (910), Expect = 1.230e-115 Identity = 174/240 (72.50%), Postives = 194/240 (80.83%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEE-----HSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LA+LTGDEQKAVKT+AFDLQLNP +PGM FHKL+ ARD NFWSVRVN DIRLIVHRS SLLLCYVDHHDKAY WAERRKLETHPKTGAAQ VEIRE V+E+ VP YV E AP K+AL N+S+DELLG+GVP EWL DV++A ED LL + DHLP EAAEALLELATGG+P+ A PFEHPDAQRRFR+M N +EL ALE+PWEKWTVFLHP QRD+VE+D Sbjct: 9 FTDSLARLTGDEQKAVKTTAFDLQLNPASPGMSFHKLDKARDKNFWSVRVNSDIRLIVHRSDQSLLLCYVDHHDKAYDWAERRKLETHPKTGAAQLVEIRETVKEVLVPIYVQSELPLVQRPAPEKLALLANISDDELLGYGVPTEWLADVKKATEDTLLIVTDHLPAEAAEALLELATGGKPRPTAAPKELTSPFEHPDAQRRFRMMTNVEELERALEFPWEKWTVFLHPEQRDMVERD 248
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A2E5JYE2_9BACT (DNA helicase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E5JYE2_9BACT) HSP 1 Score: 351 bits (901), Expect = 1.820e-114 Identity = 166/233 (71.24%), Postives = 195/233 (83.69%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEEHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVE 699 FTD LAKLTGDEQKAVKT+AFDLQ+NP NPG++FHK++ A+D NFWSVRV+RDIRLIVH++ ++LLLCYVDHHD AY WAERRKLETHPKTGAAQ VEIRE +QEI VP Y+ EE P K +F +++ELL +GVP EW+ DVR ADED +LE+ADHLP EA+EALLELATGG+P + A DPFEHPDAQRRFRVM+N +EL ALEYPWEKWT+FLHPAQR+IVE Sbjct: 9 FTDSLAKLTGDEQKAVKTTAFDLQINPANPGLKFHKVDRAKDKNFWSVRVSRDIRLIVHKTNDNLLLCYVDHHDAAYHWAERRKLETHPKTGAAQIVEIRETIQEIVVPVYIEEERPEPEKEKIFAGYTDEELLSYGVPTEWIDDVRTADEDSILELADHLPEEASEALLELATGGQPAVLQLAAPAEDPFEHPDAQRRFRVMSNVEELEQALEYPWEKWTIFLHPAQREIVE 241
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: A0A1P8UIY3_9GAMM (DNA helicase n=1 Tax=Acidihalobacter ferrooxydans TaxID=1765967 RepID=A0A1P8UIY3_9GAMM) HSP 1 Score: 351 bits (901), Expect = 1.860e-114 Identity = 171/235 (72.77%), Postives = 193/235 (82.13%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEEHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 FTD LAKLT +EQKAVKT+AFDLQLNP NPGM FHKL+ A+D +FWSVRV+RD+R+IVH + +SLLLCYVDHHDKAYQWAERRKLE HPKTGAAQ VEIRE VQEI VP YV + K LF V+++ LLG+GVP EWL D+R ADED LL++ADHLP EAAEALLELATGGRPQ V DPFEHPDAQRRFR+M +ADEL ALEYPWEKWTVFLHPAQR +VE+D Sbjct: 9 FTDSLAKLTNEEQKAVKTTAFDLQLNPANPGMSFHKLDRAKDKHFWSVRVSRDLRIIVHSTESSLLLCYVDHHDKAYQWAERRKLEIHPKTGAAQLVEIRETVQEITVPVYVEQPERLADKPKLFAAVADETLLGYGVPEEWLPDIRAADEDSLLDLADHLPSEAAEALLELATGGRPQT-VVPTPGIDPFEHPDAQRRFRLMTDADELAAALEYPWEKWTVFLHPAQRQLVERD 242
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Match: UPI00028C5CF8 (UvrD-helicase domain-containing protein n=4 Tax=Pseudomonas TaxID=286 RepID=UPI00028C5CF8) HSP 1 Score: 349 bits (896), Expect = 1.020e-113 Identity = 167/235 (71.06%), Postives = 190/235 (80.85%), Query Frame = 1 Query: 1 FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVNRDIRLIVHRSANSLLLCYVDHHDKAYQWAERRKLETHPKTGAAQFVEIRERVQEIAVPTYVAEEHSAPTKVALFENVSEDELLGFGVPAEWLVDVRRADEDKLLEIADHLPGEAAEALLELATGGRPQRPAVEIGAADPFEHPDAQRRFRVMANADELLLALEYPWEKWTVFLHPAQRDIVEKD 705 F+D L KLTGDEQK VKT+AFDLQ+N NPGM FHKL+ ARD NFWSVRV+ DIR+IVH++ +SLLLCYVDHHD+AY WAERRKLE HPKTGAAQ VE+RE VQEI +PTY+ E K ALF V ED LL +GVP EWL DVR ADED LL++A+HLP EAAEALLELATGGRP P V + DPF+HPDAQRRFRVMA+A+EL AL+YPWEKW VFLHP QR +VEKD Sbjct: 9 FSDSLVKLTGDEQKQVKTTAFDLQINIANPGMSFHKLDRARDKNFWSVRVSSDIRIIVHKTVSSLLLCYVDHHDRAYHWAERRKLEIHPKTGAAQLVEVRETVQEIRIPTYLPGESVKTVKPALFAGVEEDALLAYGVPLEWLADVRTADEDSLLQLAEHLPSEAAEALLELATGGRPPLPVVAVPGVDPFKHPDAQRRFRVMADAEELAKALDYPWEKWAVFLHPIQRQLVEKD 243 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97499.22453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97499.22453.1 >prot_M-pyrifera_M_contig97499.22453.1 ID=prot_M-pyrifera_M_contig97499.22453.1|Name=mRNA_M-pyrifera_M_contig97499.22453.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp FTDRLAKLTGDEQKAVKTSAFDLQLNPVNPGMQFHKLNAARDPNFWSVRVback to top mRNA from alignment at M-pyrifera_M_contig97499:1..705- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97499.22453.1 ID=mRNA_M-pyrifera_M_contig97499.22453.1|Name=mRNA_M-pyrifera_M_contig97499.22453.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig97499:1..705- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97499:1..705- >mRNA_M-pyrifera_M_contig97499.22453.1 ID=mRNA_M-pyrifera_M_contig97499.22453.1|Name=mRNA_M-pyrifera_M_contig97499.22453.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1410bp|location=Sequence derived from alignment at M-pyrifera_M_contig97499:1..705- (Macrocystis pyrifera P11B4 male)back to top |