prot_M-pyrifera_M_contig101030.224.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101030.224.1
Unique Nameprot_M-pyrifera_M_contig101030.224.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: A0A0C9VNG7_SPHS4 (Exosome complex protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VNG7_SPHS4)

HSP 1 Score: 58.2 bits (139), Expect = 1.510e-7
Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    1 MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTAREAENRK 81
            + E LGPL   PL D  + E D L KA   +   Y +  + F+ L+  G+N + HP+  +L R+KQYF K+K A + E RK
Sbjct:   14 LEEVLGPLFEKPLFDISS-ELDLLQKAKLQVLLPYVVNDLIFVYLKTRGINPKEHPVVAELDRIKQYFAKIKNAEDPEKRK 93          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: A0A383UZR6_BLUHO (Exosome complex protein n=2 Tax=Blumeria TaxID=34372 RepID=A0A383UZR6_BLUHO)

HSP 1 Score: 55.5 bits (132), Expect = 3.180e-7
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTA 74
            + ESL PLL+T   D  + +   L KA  ++   YAI SI F  +R+ GVN + HP+  +L R+KQYF K+KTA
Sbjct:   20 LEESLAPLLKTAFSDITS-KLPLLDKAKLYVLVTYAIESILFSYIRLHGVNARQHPVFLELTRVKQYFDKIKTA 92          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: M2N2A2_BAUPA (Exosome complex protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2N2A2_BAUPA)

HSP 1 Score: 57.0 bits (136), Expect = 3.400e-7
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTAREA 77
            + E+L PLL+T L    A +   L KA  ++   YAI SI F  LR+ GV+ ++HPI ++L R+K+YF K+KTA  A
Sbjct:   20 LEEALAPLLKTALS-TSASKLPLLDKAKLYVHATYAIESILFSALRLNGVDAKSHPIFQELNRVKEYFAKIKTAETA 95          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: A0A2T7NYC2_POMCA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NYC2_POMCA)

HSP 1 Score: 55.5 bits (132), Expect = 3.760e-7
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    5 LGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTAREAEN 79
            L PLL TP  +   E+  PL  A   L  AY+I S+ ++ L + GVN + HP+K++L+R++ Y  +VK A+E+ N
Sbjct:   31 LQPLLATPHSEL-VEKLQPLDSAKMDLVVAYSINSLFWMYLNLCGVNPKDHPVKQELERIRSYMNRVKEAQESLN 104          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: A0A125PJH5_9BASI (Exosome complex protein n=2 Tax=unclassified Rhodotorula TaxID=2640191 RepID=A0A125PJH5_9BASI)

HSP 1 Score: 56.2 bits (134), Expect = 7.030e-7
Identity = 27/82 (32.93%), Postives = 51/82 (62.20%), Query Frame = 0
Query:    1 MRESLGPLLRTPLE---DRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTAREAEN 79
            + ++L PLL TPL+   +  A    PL++A  H+  +Y +  + ++ L+ AG+   +HP+ ++L+RLK YF K+K A+  ++
Sbjct:   20 LEQALDPLLATPLQQHLEHSAAADSPLTQARAHILASYVVHDLVWVYLKAAGIEPASHPVMQELERLKGYFGKLKAAQNGQS 101          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: A0A4U0V1F1_9PEZI (Exosome complex protein n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0V1F1_9PEZI)

HSP 1 Score: 55.5 bits (132), Expect = 9.550e-7
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    1 MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTAREA 77
            + E+L PLL+T L      +   L KA  ++   YAI SI F  LR+ GV+ + HPI ++L R+K+YF K+KTA  A
Sbjct:   20 LEEALAPLLKTALS-ASTSKLPLLDKAKLYVLVTYAIESILFSALRLNGVDVKEHPIYQELNRVKEYFAKIKTAESA 95          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: A0A7M5UST6_9CNID (Nuclear nucleic acid-binding protein C1D n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5UST6_9CNID)

HSP 1 Score: 54.7 bits (130), Expect = 9.630e-7
Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    1 MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTARE 76
            ++ SL P L+ P+ D   +  DPL  A   L  AY   S+ +  L   G++ +THPIK++L R+KQY  K+K A E
Sbjct:   24 LQTSLKPFLKIPVTDIREKVKDPLENAKLDLMVAYTANSLFWTYLITQGIDPKTHPIKDELLRIKQYMGKIKLAEE 99          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: N1JFJ5_BLUG1 (Exosome complex protein n=1 Tax=Blumeria graminis f. sp. hordei (strain DH14) TaxID=546991 RepID=N1JFJ5_BLUG1)

HSP 1 Score: 55.5 bits (132), Expect = 1.080e-6
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTA 74
            + ESL PLL+T   D  + +   L KA  ++   YAI SI F  +R+ GVN + HP+  +L R+KQYF K+KTA
Sbjct:   20 LEESLAPLLKTAFSDITS-KLPLLDKAKLYVLVTYAIESILFSYIRLHGVNARQHPVFLELTRVKQYFDKIKTA 92          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: UPI0001CBB2DB (nuclear nucleic acid-binding protein C1D-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB2DB)

HSP 1 Score: 53.9 bits (128), Expect = 1.380e-6
Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0
Query:    4 SLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVK 72
            +L PLL TP  +      DPL KA   L  AYA+ ++ ++ L + GVN + HPIK++L R++ Y  ++K
Sbjct:   29 ALKPLLETPHSEIQEVVCDPLDKAKIDLVAAYAMNAMFWIYLTMQGVNPREHPIKQELDRIRNYMNRIK 97          
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Match: A0A4V5NGA8_9PEZI (Exosome complex protein n=1 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4V5NGA8_9PEZI)

HSP 1 Score: 54.7 bits (130), Expect = 1.830e-6
Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGVNTQTHPIKEDLQRLKQYFQKVKTA 74
            + E+L PLL+T L      +   L KA  ++   YA+ SI F  LR+ GV+ + HPI ++L R+K+YF K+KTA
Sbjct:   20 LEEALAPLLKTALS-ASTSKLPLLDKAKLYVLTTYAVESILFSALRLNGVDAKAHPIFQELNRVKEYFAKIKTA 92          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101030.224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C9VNG7_SPHS41.510e-739.51Exosome complex protein n=1 Tax=Sphaerobolus stell... [more]
A0A383UZR6_BLUHO3.180e-744.59Exosome complex protein n=2 Tax=Blumeria TaxID=343... [more]
M2N2A2_BAUPA3.400e-744.16Exosome complex protein n=1 Tax=Baudoinia panameri... [more]
A0A2T7NYC2_POMCA3.760e-740.00Nuclear nucleic acid-binding protein C1D n=1 Tax=P... [more]
A0A125PJH5_9BASI7.030e-732.93Exosome complex protein n=2 Tax=unclassified Rhodo... [more]
A0A4U0V1F1_9PEZI9.550e-742.86Exosome complex protein n=1 Tax=Friedmanniomyces e... [more]
A0A7M5UST6_9CNID9.630e-739.47Nuclear nucleic acid-binding protein C1D n=1 Tax=C... [more]
N1JFJ5_BLUG11.080e-644.59Exosome complex protein n=1 Tax=Blumeria graminis ... [more]
UPI0001CBB2DB1.380e-639.13nuclear nucleic acid-binding protein C1D-like n=1 ... [more]
A0A4V5NGA8_9PEZI1.830e-641.89Exosome complex protein n=1 Tax=Friedmanniomyces s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007146Sas10/Utp3/C1DPFAMPF04000Sas10_Utp3coord: 2..70
e-value: 2.0E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR15341:SF3NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1Dcoord: 3..84
IPR011082Exosome-associated factor Rrp47/DNA strand repair C1DPANTHERPTHR15341SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSORcoord: 3..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101030contigM-pyrifera_M_contig101030:282..626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101030.224.1mRNA_M-pyrifera_M_contig101030.224.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101030 261..626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101030.224.1 ID=prot_M-pyrifera_M_contig101030.224.1|Name=mRNA_M-pyrifera_M_contig101030.224.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
MRESLGPLLRTPLEDRDAEESDPLSKADDHLAHAYAIGSISFLLLRVAGV
NTQTHPIKEDLQRLKQYFQKVKTAREAENRKESASSSSLSSSSSSSSSSS
SSSSSSPSSSSPPSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007146Sas10/Utp3/C1D
IPR011082Exosome-assoc_fac/DNA_repair