mRNA_M-pyrifera_M_contig97416.22439.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97416.22439.1
Unique NamemRNA_M-pyrifera_M_contig97416.22439.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: A0A6A7BWU9_9PEZI (MFS general substrate transporter n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7BWU9_9PEZI)

HSP 1 Score: 84.3 bits (207), Expect = 5.770e-16
Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 1
Query:   34 CAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAFR--ELFFGYLLAP 456
            C AQ  RL L+FT A ++ +   LP G  LDRFGPR+S  + AAL+ +G   +A +D A   PV  D  L GF +++     ++++ F +S  FP + GL LA++  AFDAS+ VF V  L Y + D  F     F  YL  P
Sbjct:   62 CHAQDLRLNLMFTVAAVSTNICALPVGSVLDRFGPRISSCIGAALLALGALCLATADKA---PV--DGVLLGFWLLALGGPFVFIASFQLSNTFPDRTGLILALLTGAFDASSSVFLVYRLVYQHTDGGFTPSRFFLVYLAVP 199          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: L8HKT7_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HKT7_ACACA)

HSP 1 Score: 83.6 bits (205), Expect = 1.100e-15
Identity = 57/155 (36.77%), Postives = 83/155 (53.55%), Query Frame = 1
Query:   31 SCAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAFRELFFGYLLAPICLVLCCWLWPMS 495
            +C AQ  RL LI+TAA+++L  TTL  G+ +D  GPRV + LS+     G G + F   A SRP  FD +  GFV I+     ++  L  +S LF  +    L I + AFDAS +VF +  L Y     + +  F  Y    I ++LC  +WP++
Sbjct:   71 TCEAQDLRLNLIYTAAVMSLGLTTLGWGIMVDWLGPRVILPLSSVFF--GAGCLLF---AFSRPQGFDAYAIGFVGIAAGGCGMFYGLVRLSELFGKRRVTVLGIYSVAFDASTVVFPLYGLVYKATGFSLQSFFIAYSSISIIVLLCAVMWPLA 220          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: A0A4Q4T706_9PEZI (Uncharacterized protein n=1 Tax=Monosporascus ibericus TaxID=155417 RepID=A0A4Q4T706_9PEZI)

HSP 1 Score: 83.6 bits (205), Expect = 1.250e-15
Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = 1
Query:   34 CAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCY--TYLDIAFRELFFGYLLAPICLVLC 474
            C  Q  +L L+F  A +  + T LP G  LDR+GPRVS I+ + L+++G     F  +A   P  FD ++ G+ +++     +++  F++S  FP  +GL LA++  AFDASA VF    L Y  T      R+ F  YL  PI  + C
Sbjct:  114 CYLQDQKLNLMFVVASVTANVTALPIGALLDRYGPRVSGIIGSFLLSIG---AVFVASAPQLP--FDAYITGYFLLAFGGTFVFVPSFHLSNAFPKYQGLILALVTGAFDASAAVFLAFRLLYNGTRGRFGLRQFFLAYLAVPILFLAC 257          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: A0A4Q4W807_9PEZI (Uncharacterized protein n=7 Tax=unclassified Monosporascus TaxID=2618023 RepID=A0A4Q4W807_9PEZI)

HSP 1 Score: 82.8 bits (203), Expect = 2.320e-15
Identity = 52/149 (34.90%), Postives = 81/149 (54.36%), Query Frame = 1
Query:   34 CAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAF--RELFFGYLLAPICLVLC 474
            C  Q  +L L+F  A I  + T LP G  LDR+GPRVS I+ + L+++G   +A++       + FD ++ G+ +++     +++  F++S  FP  +GL LA++  AFDASA VF    L Y      F  R+ F  YL  PI  + C
Sbjct:  114 CYLQDQKLNLMFIVASITANVTALPIGALLDRYGPRVSGIIGSCLLSIGAVFMAYAPQ-----LPFDAYITGYFLLAFGGTFVFVPSFHLSNAFPKYQGLILALVTGAFDASAAVFLAFRLLYEGTRGRFGPRQFFLAYLAVPILFLAC 257          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: A0A7S0YUG9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YUG9_9CRYP)

HSP 1 Score: 81.3 bits (199), Expect = 7.870e-15
Identity = 50/161 (31.06%), Postives = 85/161 (52.80%), Query Frame = 1
Query:   25 EGSCAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAFRELFFGYLLAPICLVLCC-WLWPMSSFQ 504
            +G C  Q  RL  ++  A  A  F   P+G+ LDRFGPRV  ++ +    +G   +A S         FD F+ G+ +++   + + LS+ ++S L P   G  + I N   D S++ F V+++ Y+Y  ++ R+LF GY + P+ + L    LWPM  ++
Sbjct:  115 KGPCPEQTLRLNKVYGVATTAFCFCVWPTGVVLDRFGPRVCCMMGSCFFAIGCALLALSTQE------FDYFVVGYSLLAVGGLPVVLSVMHLSNLLPEFAGTIITIFNVCIDVSSLNFKVIYVLYSY-GVSRRDLFTGYAVVPVLIFLSAPLLWPMQKYE 268          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: A0A6A5WWY2_9PLEO (Uncharacterized protein n=1 Tax=Amniculicola lignicola CBS 123094 TaxID=1392246 RepID=A0A6A5WWY2_9PLEO)

HSP 1 Score: 77.8 bits (190), Expect = 1.100e-13
Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 1
Query:   34 CAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAF--RELFFGYLLAPI-CLVLCCWLWPMSSFQ 504
            C  Q  RL  +FT A ++ +   LP G  LDR+GPRVS I+ A L+T+G    AF   A   P  FD ++ G++ ++     +++S F +S  FP   GL LA++  AFD S+ VF    + Y   +  F  +  F  YL+ P+  L++  +L P +S++
Sbjct:   78 CYKQDLRLNFMFTVAAVSTNVVALPVGTILDRYGPRVSGIIGAILITIGTTIFAF---AWQLP--FDGYIPGYLFLALGGPFIFISSFQLSNTFPRYSGLILALLTGAFDTSSAVFLFYRIIYEATNGRFWPKYFFLCYLVVPVYILIVQLFLMPATSYK 232          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: W2QAW1_PHYPN (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2QAW1_PHYPN)

HSP 1 Score: 77.8 bits (190), Expect = 1.240e-13
Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 1
Query:   16 DAMEGSCAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAFRELFFG 441
            D  E +C AQ++RL LIF  A +A++   LP GLFLDR GPRV+++++A +   G+  +A +D+       FD F+  +V+I+    +  ++ F  S L    +   LA I+  FD S+++F V++  +       R+L  G
Sbjct:   58 DPSEPTCVAQENRLNLIFAVASVAMNAGALPVGLFLDRVGPRVTIVVAAIIEVSGLSMLAIADSQT-----FDVFVPAYVLIAFGGCITMMASFPASFLIMRYQTAILAAISCLFDGSSVMFLVLYAAHEQFGWTRRQLLLG 194          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: A0A058Z1I0_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z1I0_FONAL)

HSP 1 Score: 75.5 bits (184), Expect = 8.220e-13
Identity = 48/147 (32.65%), Postives = 81/147 (55.10%), Query Frame = 1
Query:   28 GSCAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAFRELFFGYLLAPICLV 468
            G C AQ  R+ L+FT A    +  +   G  LDR+GPR+S+++S+  + V +  V FS ++ S P  FD + +   +++       + L  I   FP + GL ++  + AFD SA++F +  L Y + ++A  +LF GYL+ P  +V
Sbjct:  159 GPCTAQILRIDLMFTIASFGTNGISPIVGFILDRYGPRLSLMISSVCIAVAL--VLFSASS-SNPA-FDMYHFSSFLLAVGGTFATIPLMGICNAFPKRSGLIISCFSGAFDISALIFLIFQLLYQHANVAISDLFLGYLIVPAIMV 301          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: H6C9R0_EXODN (MFS transporter, LAT3 family, solute carrier family 43, member 3 n=1 Tax=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) TaxID=858893 RepID=H6C9R0_EXODN)

HSP 1 Score: 75.1 bits (183), Expect = 1.130e-12
Identity = 52/143 (36.36%), Postives = 76/143 (53.15%), Query Frame = 1
Query:   34 CAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAF--RELFFGYLLAP 456
            C  Q  RL LIF  A +  + + L  G  LDR GPR+  I SA L+ +G   +A++     + + FD +  G  +IS      ++  F++S  FP  +GL LA++  AFDASA VF +  L Y     AF  R++F  YL+ P
Sbjct:  112 CYMQDQRLNLIFVIASVTANLSALLVGRILDRHGPRICGIFSAILLALGSLLMAYA-----QDLPFDVYYAGSFLISLGGTFTFVPTFHLSNTFPRFQGLILALVTGAFDASASVFLIFRLLYQATHHAFGPRQIFLVYLVVP 249          
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Match: W9YHJ3_9EURO (Uncharacterized protein n=1 Tax=Capronia coronata CBS 617.96 TaxID=1182541 RepID=W9YHJ3_9EURO)

HSP 1 Score: 75.1 bits (183), Expect = 1.130e-12
Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 1
Query:   34 CAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALMTVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPGKEGLTLAIINSAFDASAIVFYVMFLCY--TYLDIAFRELFFGYLLAPI 459
            C  Q  RL L+F  A +  + + L  G  LDR GPRV  I+SA L+ +G   +AF+     + + FD +  G  I+S      ++  F++S  FP  +GL LA++  AFDASA VF +  L Y  T+     R++F  YL+ PI
Sbjct:  112 CYMQDQRLNLMFIIASVTTNISALLVGRILDRHGPRVCGIVSAILLALGSLCMAFA-----QELPFDVYYAGSFILSLGGTFTFVPTFHLSNTFPRFQGLILALVTGAFDASASVFLIFRLLYQSTHGGFGPRQIFLVYLVFPI 250          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97416.22439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7BWU9_9PEZI5.770e-1639.86MFS general substrate transporter n=1 Tax=Piedraia... [more]
L8HKT7_ACACA1.100e-1536.77Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A4Q4T706_9PEZI1.250e-1535.57Uncharacterized protein n=1 Tax=Monosporascus iber... [more]
A0A4Q4W807_9PEZI2.320e-1534.90Uncharacterized protein n=7 Tax=unclassified Monos... [more]
A0A7S0YUG9_9CRYP7.870e-1531.06Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6A5WWY2_9PLEO1.100e-1334.38Uncharacterized protein n=1 Tax=Amniculicola ligni... [more]
W2QAW1_PHYPN1.240e-1333.10Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A058Z1I0_FONAL8.220e-1332.65Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]
H6C9R0_EXODN1.130e-1236.36MFS transporter, LAT3 family, solute carrier famil... [more]
W9YHJ3_9EURO1.130e-1236.81Uncharacterized protein n=1 Tax=Capronia coronata ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97416contigM-pyrifera_M_contig97416:146..649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score78.6
Seed ortholog evalue3e-12
Seed eggNOG ortholog28564.XP_002479510.1
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0016020,GO:0016021,GO:0031090,GO:0031224,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805,GO:0098852
EggNOG free text desc.MFS transporter Fmp42
EggNOG OGs20BJB@147545,2CMU1@1,2QRYG@2759,38H22@33154,3NU8J@4751,3QMNZ@4890,3S5NX@5042
COG Functional cat.S
Best tax levelEurotiales
Best eggNOG OGNA|NA|NA
Exons1
Model size504
Cds size483
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.0906243-CDS-M-pyrifera_M_contig97416:145..6281622816891.0906243-CDS-M-pyrifera_M_contig97416:145..628Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97416 146..628 -
1692278239.3708797-CDS-M-pyrifera_M_contig97416:145..6281692278239.3708797-CDS-M-pyrifera_M_contig97416:145..628Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97416 146..628 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816891.1028237-UTR-M-pyrifera_M_contig97416:628..6491622816891.1028237-UTR-M-pyrifera_M_contig97416:628..649Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97416 629..649 -
1692278239.3847735-UTR-M-pyrifera_M_contig97416:628..6491692278239.3847735-UTR-M-pyrifera_M_contig97416:628..649Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97416 629..649 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97416.22439.1prot_M-pyrifera_M_contig97416.22439.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97416 146..628 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97416.22439.1

>prot_M-pyrifera_M_contig97416.22439.1 ID=prot_M-pyrifera_M_contig97416.22439.1|Name=mRNA_M-pyrifera_M_contig97416.22439.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
MEGSCAAQQSRLQLIFTAAIIALSFTTLPSGLFLDRFGPRVSVILSAALM
TVGIGAVAFSDTAVSRPVYFDTFLYGFVIISGTAVLLYLSLFNISALFPG
KEGLTLAIINSAFDASAIVFYVMFLCYTYLDIAFRELFFGYLLAPICLVL
CCWLWPMSSFQ
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mRNA from alignment at M-pyrifera_M_contig97416:146..649-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97416.22439.1 ID=mRNA_M-pyrifera_M_contig97416.22439.1|Name=mRNA_M-pyrifera_M_contig97416.22439.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig97416:146..649- (Macrocystis pyrifera P11B4 male)
ACCTCTGTGGAAGAGGACGCCATGGAGGGCTCGTGTGCAGCTCAGCAGAG CCGCCTGCAGCTGATCTTCACTGCAGCGATCATTGCACTCTCCTTCACTA CGCTCCCCTCTGGTCTGTTTCTTGACCGCTTCGGCCCGCGGGTATCAGTG ATCTTGAGCGCTGCGCTGATGACTGTCGGGATCGGGGCTGTGGCTTTCTC TGACACCGCCGTCTCCCGGCCTGTGTACTTCGACACCTTCCTCTATGGCT TTGTTATCATTTCTGGAACCGCTGTGCTCCTCTATTTATCTCTGTTCAAC ATCAGTGCGCTCTTCCCGGGGAAGGAGGGTTTGACGCTGGCCATCATCAA CTCTGCCTTTGACGCAAGTGCAATTGTCTTCTATGTGATGTTTCTGTGCT ACACATACCTCGACATTGCCTTTCGAGAGCTCTTTTTCGGCTATCTTCTC GCTCCAATCTGTTTGGTGCTTTGTTGTTGGCTCTGGCCAATGTCATCCTT TCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97416:146..649-

>mRNA_M-pyrifera_M_contig97416.22439.1 ID=mRNA_M-pyrifera_M_contig97416.22439.1|Name=mRNA_M-pyrifera_M_contig97416.22439.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig97416:146..649- (Macrocystis pyrifera P11B4 male)
ATGGAGGGCTCGTGTGCAGCTCAGCAGAGCCGCCTGCAGCTGATCTTCAC
TGCAGCGATCATTGCACTCTCCTTCACTACGCTCCCCTCTGGTCTGTTTC
TTGACCGCTTCGGCCCGCGGGTATCAGTGATCTTGAGCGCTGCGCTGATG
ACTGTCGGGATCGGGGCTGTGGCTTTCTCTGACACCGCCGTCTCCCGGCC
TGTGTACTTCGACACCTTCCTCTATGGCTTTGTTATCATTTCTGGAACCG
CTGTGCTCCTCTATTTATCTCTGTTCAACATCAGTGCGCTCTTCCCGGGG
AAGGAGGGTTTGACGCTGGCCATCATCAACTCTGCCTTTGACGCAAGTGC
AATTGTCTTCTATGTGATGTTTCTGTGCTACACATACCTCGACATTGCCT
TTCGAGAGCTCTTTTTCGGCTATCTTCTCGCTCCAATCTGTTTGGTGCTT
TGTTGTTGGCTCTGGCCAATGTCATCCTTTCAGATGGAGGGCTCGTGTGC
AGCTCAGCAGAGCCGCCTGCAGCTGATCTTCACTGCAGCGATCATTGCAC
TCTCCTTCACTACGCTCCCCTCTGGTCTGTTTCTTGACCGCTTCGGCCCG
CGGGTATCAGTGATCTTGAGCGCTGCGCTGATGACTGTCGGGATCGGGGC
TGTGGCTTTCTCTGACACCGCCGTCTCCCGGCCTGTGTACTTCGACACCT
TCCTCTATGGCTTTGTTATCATTTCTGGAACCGCTGTGCTCCTCTATTTA
TCTCTGTTCAACATCAGTGCGCTCTTCCCGGGGAAGGAGGGTTTGACGCT
GGCCATCATCAACTCTGCCTTTGACGCAAGTGCAATTGTCTTCTATGTGA
TGTTTCTGTGCTACACATACCTCGACATTGCCTTTCGAGAGCTCTTTTTC
GGCTATCTTCTCGCTCCAATCTGTTTGGTGCTTTGTTGTTGGCTCTGGCC
AATGTCATCCTTTCAG
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