mRNA_M-pyrifera_M_contig110654.2241.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A2D6U7Z2_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U7Z2_9ACTN) HSP 1 Score: 138 bits (348), Expect = 1.990e-36 Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 292 LFAPFRGWLVQPDWAPRVVAGAYDAKTPDERRAIIESNPYSYFGVTRSAGDLAPGDVPDSEELLRRGAETLRRILDVGAFAPSERAAFYAYRLSYRDHTQ 591
LF PF GWL++P+WA RV+AGAYD K+P ERR I+ +N YSY GVTRS DLAPGD D LLRRGA+TL ILD AFAP++ AA +AYRL+Y H+Q
Sbjct: 6 LFEPFAGWLIRPEWAARVIAGAYDTKSPAERREIVSTNXYSYLGVTRSXEDLAPGDDADEAXLLRRGADTLXTILDAXAFAPTDHAALFAYRLTYAGHSQ 105
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A358A4G8_9ACTN (Uncharacterized protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A4G8_9ACTN) HSP 1 Score: 135 bits (339), Expect = 2.300e-34 Identity = 63/100 (63.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 292 LFAPFRGWLVQPDWAPRVVAGAYDAKTPDERRAIIESNPYSYFGVTRSAGDLAPGDVPDSEELLRRGAETLRRILDVGAFAPSERAAFYAYRLSYRDHTQ 591
LF PF GWL++P+WA RV+AGAYD K+P ERR I+ +NPYSY GVTRSA DL GD ELLRRGA+TL ILD AFAP+ AA +AYRL+Y H+Q
Sbjct: 6 LFEPFAGWLIRPEWAARVIAGAYDTKSPAERREIVSTNPYSYLGVTRSAEDLPLGDDAGEAELLRRGADTLITILDADAFAPTGHAALFAYRLTYAGHSQ 105
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A7K1Z601_9ACTN (DUF1015 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z601_9ACTN) HSP 1 Score: 121 bits (304), Expect = 2.790e-29 Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 280 VNAPLFAPFRGWLVQPDWAPRVVAGAYDAKTPDERRAIIESNPYSYFGVTRSAGDLAPGDVPDSEELLRRGAETLRRILDVGAFAPSERAAFYAYRLSYRDHT 588
++APL APFRGWL++P+W+ RV+AGAYD+KT +RRAI+E NP SY GVTRS DL G +LL +ETL RIL AF PS+ A+F+AYRLS D T
Sbjct: 1 MSAPLLAPFRGWLIRPEWSSRVIAGAYDSKTAAQRRAIVEQNPLSYLGVTRSHEDLIEGC--SDADLLSLSSETLERILKADAFTPSDHASFFAYRLSSPDKT 101
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A2E8L7U4_9ACTN (D-3-phosphoglycerate dehydrogenase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L7U4_9ACTN) HSP 1 Score: 116 bits (291), Expect = 1.580e-27 Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 2
Query: 2 YRSGSVINCVNMAAAPPRAATISIRHLDRVGVLAAVLAILRRSDLNVSPMSNRVFAGATAAVASIDVGNVPSDEVLTEIRAHEHVINVSVTLA 280
YR+G +NCVN+ P RAAT+++RH DRVGVLA VL ILR+ +LNVS M NRVFAG+ AAVASIDVG++PSD+++ E++A E VI VSVT A
Sbjct: 309 YRAGDPVNCVNLDPVPVRAATLTVRHHDRVGVLANVLQILRKEELNVSNMQNRVFAGSKAAVASIDVGHLPSDKIVDEVQALEDVIYVSVTPA 401
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A3M2GUI5_ACTSX (D-3-phosphoglycerate dehydrogenase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GUI5_ACTSX) HSP 1 Score: 112 bits (279), Expect = 8.070e-26 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 2
Query: 2 YRSGSVINCVNMAAAPPRAATISIRHLDRVGVLAAVLAILRRSDLNVSPMSNRVFAGATAAVASIDVGNVPSDEVLTEIRAHEHVINVSVT 274
YRSG V+NCVN+AAAPPR T+ +RHLDRVGVLAAV +LRR D+NV MSNRVF GA AAVASIDV N P+ E+L E+ + VI V+ T
Sbjct: 308 YRSGQVVNCVNLAAAPPRTGTLVVRHLDRVGVLAAVFDLLRRHDVNVETMSNRVFEGAVAAVASIDV-NGPAAELLPELASLPDVIGVTFT 397
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A6B1ED94_9ACTN (D-3-phosphoglycerate dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1ED94_9ACTN) HSP 1 Score: 105 bits (262), Expect = 2.150e-23 Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 2
Query: 2 YRSGSVINCVNMAAAPPRAATISIRHLDRVGVLAAVLAILRRSDLNVSPMSNRVFAGATAAVASIDVGNVPSDEVLTEIRAHEHVINVSV 271
YR+GSVINCVN+ P R AT+SIRH DRVGVLAAVL LRR LNV+ M NR+FAG+ AA A+IDV D +L +RA VI VSV
Sbjct: 308 YRTGSVINCVNLEQTPKRTATLSIRHYDRVGVLAAVLEELRRGHLNVATMQNRIFAGSVAAAATIDVAGAVEDSLLDAVRALPDVIQVSV 397
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A6B0ZFE3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZFE3_9ACTN) HSP 1 Score: 103 bits (258), Expect = 7.910e-23 Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 2
Query: 2 YRSGSVINCVNMAAAPPRAATISIRHLDRVGVLAAVLAILRRSDLNVSPMSNRVFAGATAAVASIDVGNVPSDEVLTEIRAHEHVINVSV 271
YR+GS+ NCVN+ AP R AT+S+RH DRVGVLA+VL LR DLNV+ MSNR+FAG+ AA A+IDV S+E+L +RA VI VSV
Sbjct: 308 YRTGSIANCVNLEQAPHRTATLSVRHYDRVGVLASVLEELRGGDLNVANMSNRIFAGSIAAAATIDVAGDISEELLDAVRALPDVIQVSV 397
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A6B0WKY7_9ACTN (D-3-phosphoglycerate dehydrogenase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WKY7_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 3.890e-21 Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 2
Query: 2 YRSGSVINCVNMAAAPPRAATISIRHLDRVGVLAAVLAILRRSDLNVSPMSNRVFAGATAAVASIDVGNVPSDEVLTEIRAHEHVINVS 268
YR+GS+INCVN+ AP R AT+S+RH DRVGVLA+VL +R LNV+ MSNR+FAG+ AAVA+IDV ++L +RA VI VS
Sbjct: 308 YRTGSIINCVNLEQAPHRTATLSVRHYDRVGVLASVLQEIRGCSLNVANMSNRIFAGSQAAVATIDVFGAVDQQLLDAVRALPDVIQVS 396
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A381T1X3_9ZZZZ (ACT domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381T1X3_9ZZZZ) HSP 1 Score: 92.8 bits (229), Expect = 6.830e-21 Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 2
Query: 2 YRSGSVINCVNMAAAPPRAATISIRHLDRVGVLAAVLAILRRSDLNVSPMSNRVFAGATAAVASIDVGNVPSDEVLTEIRAHEHVINVSVT 274
YR GS++NCVNMA A+TI++RH DRVGVLAAV +LR + +NV M N+VF G+ AAVA +DV ++EV++++ +HVI V T
Sbjct: 29 YRRGSLLNCVNMADDRVGASTITLRHYDRVGVLAAVFGVLREAHVNVQTMQNKVFNGSNAAVAIVDVSGEITEEVVSQLSQLDHVIQVQAT 119
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Match: A0A382E2X8_9ZZZZ (ACT domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382E2X8_9ZZZZ) HSP 1 Score: 92.4 bits (228), Expect = 1.780e-20 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2
Query: 2 YRSGSVINCVNMAAAPPRAATISIRHLDRVGVLAAVLAILRRSDLNVSPMSNRVFAGATAAVASIDVGNVPSDEVLTEIRAHEHVINVSVT 274
+R G+VINCVN+A ++T++IRH D+VGVLA V AILR+ +LNV M N++F G+ AA+A IDV S+ LT++R +H+I+V ++
Sbjct: 49 FREGNVINCVNIAKERVGSSTLTIRHYDKVGVLAEVFAILRKEELNVETMENKIFEGSKAALAIIDVSGNVSENALTQLREIDHIIHVQLS 139 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110654.2241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110654.2241.1 >prot_M-pyrifera_M_contig110654.2241.1 ID=prot_M-pyrifera_M_contig110654.2241.1|Name=mRNA_M-pyrifera_M_contig110654.2241.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp LPVRQCDQLRQHGCRTAPRRDHLDSPPRSRRCPGRCARHPPPLRPQRVAHback to top mRNA from alignment at M-pyrifera_M_contig110654:2..592+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110654.2241.1 ID=mRNA_M-pyrifera_M_contig110654.2241.1|Name=mRNA_M-pyrifera_M_contig110654.2241.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig110654:2..592+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110654:2..592+ >mRNA_M-pyrifera_M_contig110654.2241.1 ID=mRNA_M-pyrifera_M_contig110654.2241.1|Name=mRNA_M-pyrifera_M_contig110654.2241.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig110654:2..592+ (Macrocystis pyrifera P11B4 male)back to top |