mRNA_M-pyrifera_M_contig97305.22409.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A3C2B3B1_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B3B1_9ACTN) HSP 1 Score: 311 bits (797), Expect = 2.710e-104 Identity = 145/213 (68.08%), Postives = 169/213 (79.34%), Query Frame = 1 Query: 61 EGGEAASGEATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTIAWKARAPAAVTY 699 +GGE EA CPTN+VIQTDWWPELEHGG+YQLIGPDGTADAANF YSGPI Y V GIETVEIRAGGDA+ F PV S + DDIT GY+NLSD D+ +V VAKTL+ +PQ+L WDP QLDIS PAD+ A+GA VLHFDGVAY+DY+I++GD++ADQ +PSYGGAPD W+A GGNFIQQGF T E+Y++ N IAWK APA V Y Sbjct: 60 DGGE----EAICPTNLVIQTDWWPELEHGGTYQLIGPDGTADAANFIYSGPIADAYKVGGIETVEIRAGGDAVGFTPVASLLETDDDITFGYINLSDVFADAARVPMVAVAKTLDQDPQMLMWDPAQLDISTPADIGASGAEVLHFDGVAYVDYLIAKGDMSADQSNPSYGGAPDTWVAQGGNFIQQGFATNEVYKYENEIAWKDGAPAPVDY 268
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A6N9EWB6_9ACTN (ABC transporter substrate-binding protein n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EWB6_9ACTN) HSP 1 Score: 292 bits (748), Expect = 2.670e-95 Identity = 135/202 (66.83%), Postives = 161/202 (79.70%), Query Frame = 1 Query: 94 CPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTIAWKARAPAAVTY 699 CPTN+VIQTDWWPE+EH G+YQLIGP+GT+D F YSGPIQ QY V GIETVEIRAGGDAISF+PVTS MY DITLGYVN SDA KD+G+NAV+GVAKTL+INPQ++ W+P DISEPADMA TGA L+FDG Y+D+++S G +T DQ DPSY GAPDQ+I + G IQQGF T E+Y++ N I W APA V++ Sbjct: 37 CPTNLVIQTDWWPEIEHIGTYQLIGPNGTSDPETFRYSGPIQEQYKVGGIETVEIRAGGDAISFSPVTSVMYEDSDITLGYVNTSDAAKDAGTNAVIGVAKTLDINPQMVMWNPALYDISEPADMAPTGARFLYFDGSTYVDFIVSSGFMTEDQLDPSYAGAPDQFIESNGGIIQQGFATNEIYKYENEIEWNNGAPADVSF 238
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: UPI0011D256C6 (ABC transporter substrate-binding protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI0011D256C6) HSP 1 Score: 248 bits (632), Expect = 1.870e-77 Identity = 117/210 (55.71%), Postives = 149/210 (70.95%), Query Frame = 1 Query: 70 EAASGEATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTIAWKARAPAAVTY 699 EAA+GE CP+ +VIQTDW+PELEHGG+YQLIGPDGTAD +YSGP+Q QYAV G+ETV IR ++F + D + YV SD +KDSG+ +V +AKTL+ +PQ++ WDP Q DISEPAD+A TGA VLHF G +YID+MISEG +T DQ +PSY G+ W+A GG+ QQGF T E+Y++ N IAWK PA V + Sbjct: 61 EAAAGEGDCPSELVIQTDWFPELEHGGTYQLIGPDGTADVDTVSYSGPVQEQYAVGGLETVTIRT----VNFDKSQTSALADGDADMAYVTTSDIIKDSGAIPLVAIAKTLDQDPQMVMWDPEQYDISEPADIAGTGAQVLHFPGTSYIDFMISEGFITEDQSNPSYDGSDAAWVAGGGDVFQQGFATNEVYKYENDIAWKDGGPADVDF 266
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A7K1B4S7_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B4S7_9ACTN) HSP 1 Score: 244 bits (624), Expect = 2.130e-76 Identity = 111/206 (53.88%), Postives = 152/206 (73.79%), Query Frame = 1 Query: 82 GEATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTIAWKARAPAAVTY 699 G+A CP+++VIQTDW+PELEHGG+YQLIGP+GTAD A +YSGP+Q QYAV G+ET+ I+ ++F S L D + Y+ D +KDS + +V + KTL+ +PQ+L WDPTQ DI EPAD+AATGA VLHF G AYIDY+I +G +TA+Q DPSY G+ +W+A+GG++ QQGF + E++++ N IAWK APA V++ Sbjct: 53 GDAVCPSDLVIQTDWFPELEHGGTYQLIGPNGTADKATVSYSGPVQPQYAVGGLETITIKT----VNFDKANSSTLLDGDADMAYIGFGDVIKDSAAIDMVTIMKTLDKDPQMLMWDPTQHDIQEPADIAATGARVLHFPGPAYIDYLIGKGYMTAEQSDPSYDGSDAKWVADGGSYFQQGFASNEVWKYENEIAWKDGAPADVSF 254
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A4P5RWZ8_9ACTN (Nitrate ABC transporter substrate-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5RWZ8_9ACTN) HSP 1 Score: 238 bits (607), Expect = 1.510e-74 Identity = 114/197 (57.87%), Postives = 138/197 (70.05%), Query Frame = 1 Query: 109 VIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTIAWKARAPAAVTY 699 +IQTDWWPELEHGG+YQLIG G + +F YSGPIQ QY G+ETVEIRAGGDAI+ + VT+E+ D IT YV L AMK S S+ VVGVAKTLEINPQIL WDP Q I P D+ TG V HFDG+ YID+ IS+ ++A Q +PSY G+P WI+ G+ +QQGF T E+Y++ N WK APA V Y Sbjct: 1 MIQTDWWPELEHGGTYQLIGTQGVINKTSFRYSGPIQPQYGAGGVETVEIRAGGDAIATS-VTNEIKTDDSITFAYVTLGGAMKVSASSPVVGVAKTLEINPQILYWDPAQTTIKTPTDLKKTGKTVNHFDGMTYIDWFISQDYMSAAQSNPSYTGSPSDWISQAGDLVQQGFATNEVYKYENIYKWKNGAPAPVQY 196
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A6L6BPS9_9ACTN (Uncharacterized protein n=5 Tax=root TaxID=1 RepID=A0A6L6BPS9_9ACTN) HSP 1 Score: 216 bits (549), Expect = 2.300e-65 Identity = 101/216 (46.76%), Postives = 145/216 (67.13%), Query Frame = 1 Query: 52 DASEGGEAASGEATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTIAWKARAPAAVTY 699 D SE + A+G CP + IQTDW+PELEHGG+YQLIGP GTAD + +YSGP+Q QYAV G++ VEI +F S + + + Y+ ++D +KDS + ++ +AKTL+ +PQ+L WDPTQ I P D+AA+GA+ +HF ++YID+MI +G L +Q DPSY G+ W++ GG+ +QQGF T E+Y++ N I WK APA V++ Sbjct: 25 DTSEKTDPATG--VCPAKLTIQTDWFPELEHGGTYQLIGPSGTADKNSVSYSGPVQQQYAVGGLQEVEILTK----NFDKQNSSVLVDGQADMAYIGIADLIKDSAALPLIAIAKTLDQDPQMLMWDPTQYAIKTPTDIAASGASFVHFPALSYIDFMIDKGYLMPEQSDPSYNGSDATWVSKGGSILQQGFATNEIYKYENDILWKDGAPADVSF 234
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A094S1S5_9ACTN (NMT1 domain-containing protein n=1 Tax=actinobacterium acAcidi TaxID=1504320 RepID=A0A094S1S5_9ACTN) HSP 1 Score: 212 bits (539), Expect = 7.480e-64 Identity = 95/206 (46.12%), Postives = 139/206 (67.48%), Query Frame = 1 Query: 82 GEATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTIAWKARAPAAVTY 699 G+ TCP+ + IQTDW+PELEHGG YQLIG +GTA + +YSGP+QS YAV G++ VEI + S + + + +++++D +KDS + +V +AKTL+ +P ++ WDP Q D+ +P D+A TGA+ +HF G+AYIDY I +G +TADQ DPSY G+ W+A G +QQGF T E+Y++ N I WK AP+ V++ Sbjct: 34 GDGTCPSKLTIQTDWFPELEHGGVYQLIGANGTASKDSMSYSGPVQSAYAVDGLQEVEILTRNSDMR----NSAVLVNGKADMAFISVADVIKDSAALPLVAIAKTLDKDPIMVMWDPAQYDVQKPEDLATTGASYIHFPGLAYIDYFIEKGYITADQSDPSYNGSDAAWVAASGKLLQQGFATNEIYKYENDIPWKDGAPSDVSF 235
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A7Y2IHB0_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IHB0_9ACTN) HSP 1 Score: 199 bits (507), Expect = 5.190e-59 Identity = 97/218 (44.50%), Postives = 144/218 (66.06%), Query Frame = 1 Query: 4 LALAAAACGSSDSDGGDASEGGEAASGEATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDPTQLDIS--EPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQH 651 L L AAACGS DG A + CP ++VIQTDWWPE+EHGG+YQLIG G D F Y GPIQ +YAV G+ETVEIR GGDAI P ++ + +D+ + + NLSD + + ++ +A +L+I+PQ++QWDP++ S P ++AA+G +L+F+G AY++Y++ +TA+Q DPSY G+PD+W+ G+ +Q GF T E++++ Sbjct: 14 LLLLAAACGS---DG--------TAQNASGCPAHLVIQTDWWPEIEHGGAYQLIGAGGAVDNERFRYGGPIQDRYAVGGVETVEIRTGGDAIGGQPALGQLLIDEDVYIAFANLSDVIAKTAIDSTAVMA-SLDISPQMIQWDPSRYSFSADRPEELAASGLPILYFEGDAYMEYLVGARIITAEQLDPSYTGSPDRWLVAEGDVLQTGFATNEIFRY 219
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: A0A6N7FMK4_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FMK4_9ACTN) HSP 1 Score: 182 bits (463), Expect = 4.540e-52 Identity = 105/237 (44.30%), Postives = 140/237 (59.07%), Query Frame = 1 Query: 4 LALAAAACGSSDSDGGDASEGGEAASG---------EATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVA-GIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSD----AMKDSGSNAVVGVAKTLEINPQILQWDPTQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQH-HNTIAW 669 LA+ A G S DG DAS G S E CP ++V+QTDW+P+ EHGG YQLIGP G AD F YSGP+Q++Y A G++ VEIRAGG A+ P + I LGY++ D A++ AVVG TL++NPQ+L W P + DIS D+ T A VL+F G Y+DY+++EG ++ DQ D SY G P++W+ + G+ IQQGF T E Y + H AW Sbjct: 17 LAVGMLASGCSLFDGDDASASGSPTSAASAEVGAATEGPCPDHVVLQTDWFPQAEHGGLYQLIGPGGVADKDLFRYSGPLQARYRGAHGVDEVEIRAGGFAVGGRPPAEVLQADPGIYLGYISTDDIIAAALRGEQFTAVVG---TLDLNPQMLMWSPARHDISSFEDLRKTKAPVLYFPGSTYMDYLVAEGYVSPDQLDDSYDGNPERWLQSEGDVIQQGFATNEPYYYEHELAAW 250
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Match: UPI001CCEFB36 (ABC transporter substrate-binding protein n=1 Tax=Blastococcus sp. LR1 TaxID=2877000 RepID=UPI001CCEFB36) HSP 1 Score: 181 bits (459), Expect = 9.930e-52 Identity = 105/225 (46.67%), Postives = 136/225 (60.44%), Query Frame = 1 Query: 7 ALAAAACGSSD--SDGGDASEGGEAASGEATCPTNMVIQTDWWPELEHGGSYQLIGPDGTADAANFTYSGPIQSQYAVAGIETVEIRAGGDAISFAPVTSEMYLQDDITLGYVNLSDAMKDSGSNAVVGVAKTLEINPQILQWDP-TQLDISEPADMAATGANVLHFDGVAYIDYMISEGDLTADQPDPSYGGAPDQWIANGGNFIQQGFVTQELYQHHNTI-AW 669 ALA ACGS + S G E G A CP +VIQTDW PE EHGG YQL+G D DA + + SG + + TVEIRAGG AI F V+++MY DDITLGYV+ +A++ S + VGV LEI+PQ++ WDP T D E AD+A T A V +F+G AY+DY+ G L +Q D SY GAP ++A+GG QQGF + E + + N + AW Sbjct: 17 ALALTACGSEEEASSSGPTGEVGSIDLAAAGCPDTVVIQTDWNPEAEHGGVYQLVGDDSEIDAGSKSVSGTLVDTNGDSTGVTVEIRAGGPAIGFQAVSAQMYSDDDITLGYVDTDEAIQLSDTQPTVGVLAQLEISPQMIMWDPETYPDADEIADLADTDATVRYFEGSAYMDYLTGAGILREEQLDGSYDGAPAAFVASGGKDAQQGFASAEPFIYENEVDAW 241 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97305.22409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97305.22409.1 >prot_M-pyrifera_M_contig97305.22409.1 ID=prot_M-pyrifera_M_contig97305.22409.1|Name=mRNA_M-pyrifera_M_contig97305.22409.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=234bp ALALAAAACGSSDSDGGDASEGGEAASGEATCPTNMVIQTDWWPELEHGGback to top mRNA from alignment at M-pyrifera_M_contig97305:2..703- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97305.22409.1 ID=mRNA_M-pyrifera_M_contig97305.22409.1|Name=mRNA_M-pyrifera_M_contig97305.22409.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig97305:2..703- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97305:2..703- >mRNA_M-pyrifera_M_contig97305.22409.1 ID=mRNA_M-pyrifera_M_contig97305.22409.1|Name=mRNA_M-pyrifera_M_contig97305.22409.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1404bp|location=Sequence derived from alignment at M-pyrifera_M_contig97305:2..703- (Macrocystis pyrifera P11B4 male)back to top |