mRNA_M-pyrifera_M_contig9726.22400.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: D7FSX1_ECTSI (TPR Domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX1_ECTSI) HSP 1 Score: 159 bits (402), Expect = 1.300e-44 Identity = 79/113 (69.91%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 1 LASGVRRNLRRRYNFVCFTDDVLALDGMTRVVAKPIG-ARCEGWKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEHRSEGLNSSLMSWDA 336 LA+GVRRNLRR + FVC+TDDV AL M VVA+P+G ARC W+GWWHKAFLFSRE L GRV+Y DLDTVI G LD+IAGY PFA LS MANE R GLNSS+MSWDA Sbjct: 243 LAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYIDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDA 355
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: A0A6H5J8Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y9_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.060e-43 Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 LASGVRRNLRRRYNFVCFTDDVLALDGMTRVVAKPIGARCEG-WKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEHRSEGLNSSLMSWDADS 342 LA+GVRRNL R + FVCFTDDV AL M VVA+P+G+ G W+GWWHKAFLFSRE L GRV+Y DLDTVI LDDIAGY PFA LS MANE R GLNSS+MSWDA S Sbjct: 208 LAAGVRRNLLRDHRFVCFTDDVEALSEMPGVVARPLGSARRGEWRGWWHKAFLFSRETTLAGRVMYIDLDTVIADSLDDIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGS 322
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: A0A0M0K5E4_9EUKA (Tpr domain containing protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K5E4_9EUKA) HSP 1 Score: 102 bits (254), Expect = 5.280e-23 Identity = 61/118 (51.69%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 1 LASGVRRNLRRRY---NFVCFTDDVLALDGMTRVVAKPIGARCEGWKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGP--LDDIAGYVEPFAALSVAEM-ANEHRSEGLNSSLMSWDA 336 L GVRR L +FVCFTDDV LD + A+P+ R E WKGWWHKA LFSR AGL+GRVLY DLDTVI+ + +A Y PFA LS A E +G N+S+M W+A Sbjct: 365 LCRGVRRALGAAVVGAHFVCFTDDVDGLDA--DIEARPLPLRREEWKGWWHKAHLFSRAAGLEGRVLYIDLDTVIIDTYCMASLAAYDGPFATLSSRGFDAEEGYVDGYNTSVMVWEA 480
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: A0A7S2SGH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGH1_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.710e-22 Identity = 55/114 (48.25%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 1 LASGVRRNLRRRYNFVCFTDDVLALDGMTRVVAKPIGARCEGWKGWWHKAFLFSREA----GLKGRVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEHRSEGLNSSLMSW 330 LA+G+R +L Y CFTDD +L R + P +GWW KAFLFS EA L RVLY DLDT++VGPL+++AG V PF L MANE R+ G NSS+M W Sbjct: 86 LAAGLRGHLSVPYRVTCFTDDSSSLAEDVRGILFPEMPL----QGWWLKAFLFSSEACSQLQLGSRVLYIDLDTIVVGPLEELAGLVVPFGTLGTDGMANERRTGGYNSSVMVW 195
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: A0A7S2N911_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2N911_9DINO) HSP 1 Score: 97.4 bits (241), Expect = 8.000e-22 Identity = 57/114 (50.00%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 1 LASGVRRNLRR-RYNFVCFTDDVLALDGMTRVVAKPIGARCEGWKGWWHKAFLFSREAGLKG-RVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEHRSEGLNSSLMSWDA 336 L GVRR+L +F+CFTDD+ LD P +G WW KA+LFS+EAGL G RVLY DLD V+VG LDD+AG+ PFA L ++A E S G NSS+M+W+A Sbjct: 198 LFEGVRRHLPTYEGSFICFTDDLEGLDERIEKRLLP-----DGLPLWWGKAYLFSQEAGLDGLRVLYLDLDQVLVGSLDDLAGFRGPFAVLGTDDIACELASGGYNSSVMAWEA 306
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: A0A1V9Z1Y7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1Y7_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 8.220e-21 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 1 LASGVRRNLRRRYNFVCFTDDVLALDGMTRVVAKPIGARCEGWKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEHRSEGLNSSLMSWDA 336 L SGVRR+LRR + F CFT+ L + V+ P+ EG+ GWW+KA LF+ ++ + GRV+Y DLDTV+VG L + Y F L+ +M NE R+ G+NSS+M W A Sbjct: 193 LLSGVRRHLRRDFQFHCFTEAPHGL--ASDVLVHPLR---EGFTGWWNKAQLFAADSPVHGRVVYIDLDTVVVGDLTALFSYTGNFGTLATDDMHNERRAGGINSSVMIWTA 299
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: A0A8J6C5Z4_DIALT (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5Z4_DIALT) HSP 1 Score: 95.9 bits (237), Expect = 8.970e-21 Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 1 LASGVRRNLRRR--YNFVCFTDDVLALDGMTRVVAKPIGARCEGWKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEH-RSEGLNSSLMSWDA 336 L + VR ++ ++FVC+TDD + LD V +P+ GW GWW KA +F A GRV+YFDLDT+I+GPLD + PFA LS AE A E +EG+NSS+M WDA Sbjct: 313 LRAAVRAHMAAELAFDFVCYTDDPVGLDA--EVQTRPLDGM-PGWDGWWLKAAIFGPAAISAGRVVYFDLDTIIIGPLDALLLCNAPFATLSAAEWACERDNAEGVNSSIMLWDA 424
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: A0A024TX51_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX51_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.650e-20 Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 1 LASGVRRNLRR-RYNFVCFTDDVLALDGMTRVVAKPIGAR--CEGWKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEHRSEGLNSSLMSWDAD 339 L GV R+L+ RY F C TD+ + L A I R GW GWW+KA +FS G GR+LY DLD+V+VG LDD+A Y F L +M NE R G+NSS+M+W AD Sbjct: 198 LHRGVARHLKSVRYTFCCLTDNAVGL-------APEIDVRLLAPGWVGWWNKAQVFSPAFGWTGRMLYLDLDSVLVGSLDDLALYSGWFGTLKTDDMENERRIGGINSSVMAWHAD 306
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: W4GFR7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFR7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.380e-20 Identity = 54/116 (46.55%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 1 LASGVRRNLRR-RYNFVCFTDDVLALDGMTRVVAKPIGARCE--GWKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGPLDDIAGYVEPFAALSVAEMANEHRSEGLNSSLMSWDAD 339 L GV R+L+ + F C TDD +A+ I R GW GWW+KA +FS G +GR+LYFDLDTV VG LDD+A Y F L M NE R G+NSS+M+W AD Sbjct: 203 LYRGVARHLKSVPFTFCCLTDDPAG-------IAQEINVRQLELGWVGWWNKAQVFSPSFGWRGRMLYFDLDTVFVGSLDDLAMYAGWFGTLETDAMENERRVGGINSSVMTWHAD 311
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Match: F0Y6H3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6H3_AURAN) HSP 1 Score: 92.0 bits (227), Expect = 1.990e-19 Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 1 LASGVRRNLRRRYNFVCFTDDVLALDGMTRVVAKPIGARCEGWKGWWHKAFLFSREAGLKGRVLYFDLDTVIVGPLDDIAGYV-EPFAALSVAEMANEHRSEGLNSSLMSWDA 336 LA VRR+L VC+TDD LD V A+P+ A + WW KA+LFS +AGL+GRVLY DLDTV+ GPL +A Y + A L ++ANE+RS G NSSLM W A Sbjct: 219 LARAVRRHLAVGA-VVCYTDDPSGLDADV-VEARPLPAGT-ALEAWWLKAYLFSADAGLEGRVLYVDLDTVVCGPLAGLAAYGGDSVALLGTDDLANENRSGGYNSSLMVWTA 328 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9726.22400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9726.22400.1 >prot_M-pyrifera_M_contig9726.22400.1 ID=prot_M-pyrifera_M_contig9726.22400.1|Name=mRNA_M-pyrifera_M_contig9726.22400.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp LASGVRRNLRRRYNFVCFTDDVLALDGMTRVVAKPIGARCEGWKGWWHKAback to top mRNA from alignment at M-pyrifera_M_contig9726:8940..10439+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9726.22400.1 ID=mRNA_M-pyrifera_M_contig9726.22400.1|Name=mRNA_M-pyrifera_M_contig9726.22400.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig9726:8940..10439+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9726:8940..10439+ >mRNA_M-pyrifera_M_contig9726.22400.1 ID=mRNA_M-pyrifera_M_contig9726.22400.1|Name=mRNA_M-pyrifera_M_contig9726.22400.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig9726:8940..10439+ (Macrocystis pyrifera P11B4 male)back to top |