mRNA_M-pyrifera_M_contig97232.22395.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97232.22395.1
Unique NamemRNA_M-pyrifera_M_contig97232.22395.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A2E0SYH7_9ACTN (Sugar dehydrogenase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0SYH7_9ACTN)

HSP 1 Score: 335 bits (858), Expect = 2.000e-111
Identity = 161/237 (67.93%), Postives = 180/237 (75.95%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711
            LD++ ET A GERGLLG+AVD E LYVNFTDL GTT +DAF  D  GRPG R PLL I+QPF NHNGG LAIGPDG+LY+GVGDGG+  DPL AGQDP QILGS++RIDPTP    PY IPADNPYA          PEIF IGLRNPWR +FDP+T+DLW+ADVGQN WEEI LLLG NG G G NLGW LRE    F+G+RP  N+DPVF YPH    PSGCSI+GG VYRG A+
Sbjct:  115 LDINDETTARGERGLLGLAVDDEALYVNFTDLSGTTTIDAFVFDARGRPGNRIPLLKIDQPFGNHNGGALAIGPDGNLYIGVGDGGAADDPLNAGQDPDQILGSIVRIDPTPTEREPYAIPADNPYANGDG-----VPEIFTIGLRNPWRIAFDPMTNDLWVADVGQNRWEEITLLLGTNGWGRGDNLGWRLREGASTFAGDRPENNIDPVFVYPHGNGVPSGCSITGGEVYRGSAI 346          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6B0ZIK1_9ACTN (PQQ-dependent sugar dehydrogenase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZIK1_9ACTN)

HSP 1 Score: 293 bits (749), Expect = 1.620e-96
Identity = 148/237 (62.45%), Postives = 172/237 (72.57%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711
            +D+ AET A GERGLLGIAV    LY NFTDL G T VDAF  +  G  G R  +L   QPFSNHNGG LAIGPDG LYV  GDGGSGGDPL AGQDPT  LG++LRI+PTP A  PY +P+DNP+A A  D +G +PEIF  G+RNPWRFSFD  T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE  H F+G+ P  + DPV+EY  D     GCS++GG VYRG A+
Sbjct:    1 MDIGAETEATGERGLLGIAVTDRWLYANFTDLAGDTRVDAFEREGTGLSGHRRTILFQAQPFSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLNAGQDPTTWLGAILRIEPTPDAAEPYAVPSDNPFA-ADPDKAG-RPEIFLTGVRNPWRFSFDRATGDLWIADVGQDAYEEVTVLLAANGGGLGANLGWRLREGLHRFTGDEPPDHADPVWEYSQD----DGCSVTGGYVYRGSAI 231          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K2EA08_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2EA08_9ACTN)

HSP 1 Score: 294 bits (752), Expect = 1.150e-95
Identity = 151/237 (63.71%), Postives = 170/237 (71.73%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711
            LD+ AET A GERGLLGIAV    LY NFTDL G T VDAF  D  G  G R  +L   QP+SNHNGG LAIGPDG LYV  GDGGSGGDPL AGQDPT  LG++LRI PTP A  PY +PADNP+A A  D +G  PEIF  G+RNPWRFSFD  T DLWIADVGQN +EE+ +LL ANG GLGANLGW LRE  H F+G+ P  + DPV+EY  D     GCS++GG VYRG A+
Sbjct:   95 LDIGAETRATGERGLLGIAVTDRWLYANFTDLAGDTRVDAFERDGTGLSGHRRTILFQAQPYSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLDAGQDPTTWLGAVLRIQPTPDAAEPYAVPADNPFA-AGQDRAG-LPEIFLTGVRNPWRFSFDRATGDLWIADVGQNAYEEVTVLLAANGGGLGANLGWRLREGLHYFTGDEPPDHADPVWEYSQD----DGCSVTGGYVYRGSAI 325          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6N9EP91_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EP91_9ACTN)

HSP 1 Score: 295 bits (754), Expect = 1.660e-95
Identity = 146/237 (61.60%), Postives = 172/237 (72.57%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711
            LD++AET A GE+GLLGIAV    L+VNFTDL G T V+AF  D +G  G R  +LT +QPF NHNGG LAIG DG LY+G GDGGSGGDPL AGQDPT  LG++LRI+PTP    PY IP DNP+  A       +PEIF IG+RNPWRFSFD  T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE  H F+G+ P G+ DPV+EY  D     GCS++GG VYRG A+
Sbjct:  128 LDITAETRATGEQGLLGIAVADHWLFVNFTDLAGDTRVEAFERDGSGLSGRRRTILTQQQPFRNHNGGDLAIGEDGLLYIGFGDGGSGGDPLNAGQDPTTWLGAVLRIEPTPEGVEPYAIPPDNPFVAADGQDPAGRPEIFLIGVRNPWRFSFDRATGDLWIADVGQDSYEEVTVLLAANGGGLGANLGWRLREGLHVFAGDEPPGHADPVWEYGQD----DGCSVTGGFVYRGAAI 360          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K1ZDV0_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZDV0_9ACTN)

HSP 1 Score: 291 bits (745), Expect = 7.480e-94
Identity = 145/241 (60.17%), Postives = 175/241 (72.61%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASV---DTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEY-PHDGATPSGCSISGGVVYRGLAV 711
            LDLSAET+A GE+GLLGIAV  + LY NFTD +  T ++AF  +     GER  +L   QP+ NHNGG + IGPDGHLYV  GDGG+GGDPL  GQ+PT  LGS+LRI PTP +  PY +PADNP+A A     D S   PE+F  G+RNPWRFSFDP T DLWIADVGQ+ +EE+ +LL ANG G+GANLGW LRE  HEF+G++P GNVDPV+EY PHDG     CS++GG VYRG  +
Sbjct:  148 LDLSAETIAVGEQGLLGIAVSDDWLYANFTDKNSNTQLEAFKREGTSLSGERRTILRQTQPYRNHNGGAVVIGPDGHLYVAFGDGGAGGDPLDHGQNPTTWLGSILRITPTPDSTEPYAVPADNPFASAQGAQGDASLGSPEVFLFGVRNPWRFSFDPGTGDLWIADVGQDLYEEVTVLLAANGGGVGANLGWRLREGLHEFTGDKPPGNVDPVWEYGPHDG-----CSVTGGFVYRGSEI 383          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6L7XDC5_9ACTN (Sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XDC5_9ACTN)

HSP 1 Score: 292 bits (747), Expect = 9.140e-94
Identity = 149/237 (62.87%), Postives = 170/237 (71.73%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711
            LD+ AET A GERGLLGIAV    LY NFTDL G T VDAF  D  G  G R  +L   QPFSNHNGG LAIGPDG LYV  GDGGSGGDPL AGQDPT  LG++LRI+PTP A  PY +P DNP+A A  D +G +PEIF  G+RNPWR SFD  T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE  H F+G+ P  + DPV+EY  D     GCS++GG VYRG A+
Sbjct:  184 LDIGAETEATGERGLLGIAVTDRWLYANFTDLAGNTRVDAFERDGTGLGGHRRTILFQPQPFSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLNAGQDPTTWLGAVLRIEPTPDAAEPYAVPTDNPFA-AGQDGAG-RPEIFLTGVRNPWRLSFDRATGDLWIADVGQDAYEEVTVLLAANGGGLGANLGWRLREGLHRFTGDEPPNHADPVWEYSQD----DGCSVTGGYVYRGSAI 414          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K2ARC1_9ACTN (Sugar dehydrogenase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2ARC1_9ACTN)

HSP 1 Score: 290 bits (743), Expect = 2.000e-93
Identity = 148/237 (62.45%), Postives = 170/237 (71.73%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711
            LD+ AET A GE+GLLGIAV    LY NFTDL G T VDAF  D  G  G R  +L   QPFSNHNGG LAIGPDG LYV  GDGGSGGDPL AGQDPT  LG++LRI+PTP A  PY +P DNP+A A  D +G +PEIF  G+RNPWR SFD  T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE  H F+G+ P  + DPV+EY  D     GCS++GG VYRG A+
Sbjct:  163 LDIGAETEATGEQGLLGIAVTDRWLYANFTDLAGNTRVDAFERDGTGLGGHRRTILFQPQPFSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLNAGQDPTTWLGAVLRIEPTPDAAEPYAVPTDNPFA-AGQDGAG-RPEIFLTGVRNPWRLSFDRATGDLWIADVGQDAYEEVTVLLAANGGGLGANLGWRLREGLHRFTGDEPPNHADPVWEYSQD----DGCSVTGGYVYRGSAI 393          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K2BVL9_9ACTN (PQQ-dependent sugar dehydrogenase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BVL9_9ACTN)

HSP 1 Score: 285 bits (728), Expect = 6.400e-92
Identity = 147/231 (63.64%), Postives = 165/231 (71.43%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVV 693
            LD+ AET A GERGLLGIAV    LY NFTDL G T VDAF  D  G  G R  +L   QP+SNHNGG LAIGPDG LYV  GDGGSGGDPL AGQDPT  LG++LRI PTP A  PY +PADNP+A A  D +G  PEIF  G+RNPWRFSFD  T DLWIADVGQN +EE+ +LL ANG GLGANLGW LRE  H F+G+ P  + DPV+EY  D     GCS++GG V
Sbjct:  177 LDIGAETRATGERGLLGIAVTDRWLYANFTDLAGDTRVDAFERDGTGLSGHRRTILFQAQPYSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLDAGQDPTTWLGAVLRIQPTPDAAEPYAVPADNPFA-AGQDRAG-LPEIFLTGVRNPWRFSFDRATGDLWIADVGQNAYEEVTVLLAANGGGLGANLGWRLREGLHYFTGDEPPDHADPVWEYSQD----DGCSVTGGYV 401          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6I3WWN2_9ACTN (Sugar dehydrogenase n=2 Tax=root TaxID=1 RepID=A0A6I3WWN2_9ACTN)

HSP 1 Score: 256 bits (654), Expect = 1.400e-80
Identity = 130/242 (53.72%), Postives = 167/242 (69.01%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIA--VDTENLYVNFTDLDGTTHVDAFALDEAGR--PGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVD-PVFEYPHDGATPSGCSISGGVVYRGLAV 711
            LD+S+  ++G E+GLLG+A   D E+ YV++TD DG T +  FA+   G   P  R  LLTI QP+ NHNGG +  GPDG LY+G+GDGGSGGDP     D   +LG +LRIDPTP A RPY IPADNP+    ++  G +PEI++IGLRNPWRF+FD    DLWIADVGQ++WEEI++   + G+G GAN GW+  E TH F+ ++P   V  P+FEYPH  A   GCSI+GGV YRG A+
Sbjct:  112 LDISSIIVSGNEQGLLGMAFAADGEHAYVDYTDRDGNTVIAEFAVGSNGTFDPASRRELLTINQPYPNHNGGAIRFGPDGLLYIGMGDGGSGGDPDRRALDTGDLLGKILRIDPTPSAGRPYTIPADNPF----INVPGARPEIWSIGLRNPWRFNFDRTNGDLWIADVGQDQWEEIDVATASTGAGRGANFGWSAFEGTHRFNEDQPADGVTMPIFEYPHGSA---GCSIAGGVRYRGSAI 346          
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A838PXM6_9ACTN (PQQ-dependent sugar dehydrogenase n=1 Tax=Euzebyaceae bacterium TaxID=2740542 RepID=A0A838PXM6_9ACTN)

HSP 1 Score: 256 bits (653), Expect = 4.840e-80
Identity = 138/240 (57.50%), Postives = 164/240 (68.33%), Query Frame = 1
Query:    1 LDLSAETMAGGERGLLGIAV--DTENLYVNFTDLDGTTHVDAFAL-DEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711
            LDLS +T+A  ERGLLGIA   D   LY ++T+LDG T +DA+   D    P  R  LL ++QPF+NHNGG +AIGPD  LY+G+GDGGS GDP G GQDP  +LGSLLRIDP  G+  PY IP DNP+    +D +G QPEI+A GLRNPWRFSFD  T DLWIADVGQ   EEI+     +G G  AN GWNLRE    +SGE P  NV+PVF+Y  DG     CS++GG VYRG AV
Sbjct:  153 LDLSEQTVAESERGLLGIAFSPDGRTLYASYTNLDGDTRLDAYDFADATADPSSRRELLAVDQPFANHNGGNVAIGPDDLLYLGLGDGGSAGDPHGHGQDPGTLLGSLLRIDP--GSGDPYAIPEDNPF----LDRAGAQPEIYAYGLRNPWRFSFDRDTGDLWIADVGQGAREEIDYA--PSGQGARANYGWNLREGAISYSGEPPADNVEPVFDYGRDGGR---CSVTGGYVYRGAAV 381          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0SYH7_9ACTN2.000e-11167.93Sugar dehydrogenase n=6 Tax=Acidimicrobiaceae bact... [more]
A0A6B0ZIK1_9ACTN1.620e-9662.45PQQ-dependent sugar dehydrogenase n=1 Tax=Acidimic... [more]
A0A7K2EA08_9ACTN1.150e-9563.71PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimic... [more]
A0A6N9EP91_9ACTN1.660e-9561.60PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimic... [more]
A0A7K1ZDV0_9ACTN7.480e-9460.17PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimic... [more]
A0A6L7XDC5_9ACTN9.140e-9462.87Sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bact... [more]
A0A7K2ARC1_9ACTN2.000e-9362.45Sugar dehydrogenase n=5 Tax=Acidimicrobiaceae bact... [more]
A0A7K2BVL9_9ACTN6.400e-9263.64PQQ-dependent sugar dehydrogenase (Fragment) n=1 T... [more]
A0A6I3WWN2_9ACTN1.400e-8053.72Sugar dehydrogenase n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A838PXM6_9ACTN4.840e-8057.50PQQ-dependent sugar dehydrogenase n=1 Tax=Euzebyac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97232contigM-pyrifera_M_contig97232:1..711 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score226.1
Seed ortholog evalue1.7e-56
Seed eggNOG ortholog67281.JNZZ01000016_gene6115
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glucose / Sorbosone dehydrogenase
EggNOG OGs2I9ZW@201174,41AW1@629295,COG2133@1,COG2133@2
COG Functional cat.G
Best tax levelStreptomyces griseus group
Best eggNOG OGNA|NA|NA
Exons1
Model size711
Cds size690
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816888.8408995-CDS-M-pyrifera_M_contig97232:0..6901622816888.8408995-CDS-M-pyrifera_M_contig97232:0..690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97232 1..690 -
1692278238.0389555-CDS-M-pyrifera_M_contig97232:0..6901692278238.0389555-CDS-M-pyrifera_M_contig97232:0..690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97232 1..690 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816888.853362-UTR-M-pyrifera_M_contig97232:690..7111622816888.853362-UTR-M-pyrifera_M_contig97232:690..711Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97232 691..711 -
1692278238.0617776-UTR-M-pyrifera_M_contig97232:690..7111692278238.0617776-UTR-M-pyrifera_M_contig97232:690..711Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig97232 691..711 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97232.22395.1prot_M-pyrifera_M_contig97232.22395.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97232 1..690 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97232.22395.1

>prot_M-pyrifera_M_contig97232.22395.1 ID=prot_M-pyrifera_M_contig97232.22395.1|Name=mRNA_M-pyrifera_M_contig97232.22395.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
MAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLT
IEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLR
IDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPIT
DDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGN
VDPVFEYPHDGATPSGCSISGGVVYRGLAV
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mRNA from alignment at M-pyrifera_M_contig97232:1..711-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97232.22395.1 ID=mRNA_M-pyrifera_M_contig97232.22395.1|Name=mRNA_M-pyrifera_M_contig97232.22395.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig97232:1..711- (Macrocystis pyrifera P11B4 male)
CTCGATCTCTCTGCGGAGACCATGGCCGGCGGTGAACGCGGGCTCCTCGG CATCGCCGTCGACACCGAGAACCTCTATGTGAACTTCACCGATCTCGACG GCACCACCCATGTCGACGCGTTCGCACTCGACGAGGCCGGTCGCCCTGGC GAGCGACATCCCCTCCTCACGATCGAGCAGCCCTTCAGCAACCACAACGG CGGCGGGCTCGCCATCGGGCCCGATGGGCATCTCTACGTCGGTGTAGGCG ACGGCGGCTCCGGCGGCGACCCGCTCGGCGCGGGCCAGGACCCCACCCAG ATCCTCGGATCATTGTTGCGCATCGACCCCACTCCCGGCGCCGAACGCCC CTACGAGATCCCCGCCGACAACCCCTACGCCCAGGCCTCGGTCGACACGT CCGGCGAACAGCCGGAGATCTTCGCCATCGGTCTGCGCAACCCCTGGCGG TTCTCGTTCGACCCGATCACCGACGATCTCTGGATCGCCGACGTGGGGCA GAATGAGTGGGAGGAGATCAACCTGCTCCTCGGCGCCAACGGGTCGGGCC TCGGTGCCAACCTCGGCTGGAACCTGCGCGAGGCGACCCACGAGTTCAGC GGCGAACGCCCCATCGGCAACGTCGATCCGGTCTTCGAGTATCCCCACGA CGGCGCCACGCCCAGTGGCTGCTCGATCAGCGGTGGCGTCGTCTACCGGG GCCTCGCTGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97232:1..711-

>mRNA_M-pyrifera_M_contig97232.22395.1 ID=mRNA_M-pyrifera_M_contig97232.22395.1|Name=mRNA_M-pyrifera_M_contig97232.22395.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig97232:1..711- (Macrocystis pyrifera P11B4 male)
ATGGCCGGCGGTGAACGCGGGCTCCTCGGCATCGCCGTCGACACCGAGAA
CCTCTATGTGAACTTCACCGATCTCGACGGCACCACCCATGTCGACGCGT
TCGCACTCGACGAGGCCGGTCGCCCTGGCGAGCGACATCCCCTCCTCACG
ATCGAGCAGCCCTTCAGCAACCACAACGGCGGCGGGCTCGCCATCGGGCC
CGATGGGCATCTCTACGTCGGTGTAGGCGACGGCGGCTCCGGCGGCGACC
CGCTCGGCGCGGGCCAGGACCCCACCCAGATCCTCGGATCATTGTTGCGC
ATCGACCCCACTCCCGGCGCCGAACGCCCCTACGAGATCCCCGCCGACAA
CCCCTACGCCCAGGCCTCGGTCGACACGTCCGGCGAACAGCCGGAGATCT
TCGCCATCGGTCTGCGCAACCCCTGGCGGTTCTCGTTCGACCCGATCACC
GACGATCTCTGGATCGCCGACGTGGGGCAGAATGAGTGGGAGGAGATCAA
CCTGCTCCTCGGCGCCAACGGGTCGGGCCTCGGTGCCAACCTCGGCTGGA
ACCTGCGCGAGGCGACCCACGAGTTCAGCGGCGAACGCCCCATCGGCAAC
GTCGATCCGGTCTTCGAGTATCCCCACGACGGCGCCACGCCCAGTGGCTG
CTCGATCAGCGGTGGCGTCGTCTACCGGGGCCTCGCTGTCATGGCCGGCG
GTGAACGCGGGCTCCTCGGCATCGCCGTCGACACCGAGAACCTCTATGTG
AACTTCACCGATCTCGACGGCACCACCCATGTCGACGCGTTCGCACTCGA
CGAGGCCGGTCGCCCTGGCGAGCGACATCCCCTCCTCACGATCGAGCAGC
CCTTCAGCAACCACAACGGCGGCGGGCTCGCCATCGGGCCCGATGGGCAT
CTCTACGTCGGTGTAGGCGACGGCGGCTCCGGCGGCGACCCGCTCGGCGC
GGGCCAGGACCCCACCCAGATCCTCGGATCATTGTTGCGCATCGACCCCA
CTCCCGGCGCCGAACGCCCCTACGAGATCCCCGCCGACAACCCCTACGCC
CAGGCCTCGGTCGACACGTCCGGCGAACAGCCGGAGATCTTCGCCATCGG
TCTGCGCAACCCCTGGCGGTTCTCGTTCGACCCGATCACCGACGATCTCT
GGATCGCCGACGTGGGGCAGAATGAGTGGGAGGAGATCAACCTGCTCCTC
GGCGCCAACGGGTCGGGCCTCGGTGCCAACCTCGGCTGGAACCTGCGCGA
GGCGACCCACGAGTTCAGCGGCGAACGCCCCATCGGCAACGTCGATCCGG
TCTTCGAGTATCCCCACGACGGCGCCACGCCCAGTGGCTGCTCGATCAGC
GGTGGCGTCGTCTACCGGGGCCTCGCTGTC
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