mRNA_M-pyrifera_M_contig97119.22369.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97119.22369.1
Unique NamemRNA_M-pyrifera_M_contig97119.22369.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: UPI000644AC1A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AC1A)

HSP 1 Score: 112 bits (279), Expect = 7.030e-29
Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 1
Query:   28 AAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDD--QAENFGDGIYLYAGGALLAFGILLNMWTLQALGIKGM 315
            A   I++HVANYN TA LE+NTR+FTK +GK+ +Y+YAV+L++SAL+RD FI  A+ +D  Q E F D      G +   FGILLN+WTL ALGIKGM
Sbjct:    8 ALVSIVVHVANYNFTAQLEYNTRIFTKAIGKYTIYYYAVYLILSALIRDHFIDTAIQNDKYQIELFPDEFATLLGNSCFIFGILLNLWTLHALGIKGM 105          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: A0A0L0SL61_ALLM3 (Phosphatidyl-N-methylethanolamine N-methyltransferase n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SL61_ALLM3)

HSP 1 Score: 111 bits (278), Expect = 1.100e-28
Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 1
Query:   16 TFCTAAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAEN--FGDGIYLYAGGALLAFGILLNMWTLQALGIKGM 315
            T   AA  I++HV NYN TA +EH TRVFT++LG+HAVY+YAV+L++SAL RD FI  A+  D A    F   +  Y G A+  FG+LLN WTL+ALGIKGM
Sbjct:   15 TAVIAAVAIVVHVLNYNLTAQVEHKTRVFTRLLGRHAVYYYAVYLILSALARDYFIDVAMAHDGASLVFFPPQVAQYIGIAMFVFGLLLNAWTLKALGIKGM 116          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: F0ZUV5_DICPU (Phosphatidylethanolamine N-methyltransferase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZUV5_DICPU)

HSP 1 Score: 106 bits (265), Expect = 9.710e-27
Identity = 53/98 (54.08%), Postives = 68/98 (69.39%), Query Frame = 1
Query:   28 AAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAEN--FGDGIYLYAGGALLAFGILLNMWTLQALGIKGM 315
            A   I+LHV NYNATA  E+ TR FTK++GK  +Y+YAV+LV+SAL+RD FI  A+  DQ     F   +  + G +   FGILLN+WTL+ALGIKGM
Sbjct:   12 AFIAIVLHVVNYNATAQFEYKTRTFTKIIGKQTIYYYAVYLVISALIRDHFINAAIDKDQNSLVLFPQEVAKFFGNSCFIFGILLNIWTLKALGIKGM 109          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: PEMT2_DICDI (Phosphatidylethanolamine N-methyltransferase B n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=PEMT2_DICDI)

HSP 1 Score: 104 bits (260), Expect = 5.480e-26
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 1
Query:   28 AAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAENFGDGIYLYA-------GGALLAFGILLNMWTLQALGIKGM 315
            A   I+LHV NYN TA  E+ TR FTK++G++A+Y+YAVFL++SAL+RD FI  A++ D+     D I L+        G +   FGILLN+WTL+ALGIKGM
Sbjct:   12 AFVAIVLHVVNYNVTAQFEYKTRYFTKLIGRNAIYYYAVFLIISALIRDHFINVAVLSDK-----DSIILFPTEIANMIGDSCFIFGILLNIWTLKALGIKGM 109          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: A0A1Y2HD22_9FUNG (Phosphatidyl-N-methylethanolamine N-methyltransferase n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HD22_9FUNG)

HSP 1 Score: 104 bits (259), Expect = 8.750e-26
Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 1
Query:   28 AAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAEN--FGDGIYLYAGGALLAFGILLNMWTLQALGIKGM 315
            AA  I+ HVANYN TA +E+NTR+FTK +GK+A+YFYAV+L++SAL RD  I  A++ D      F   I    G +L A GIL+N+WTL+ALGIK M
Sbjct:   21 AAGAIVAHVANYNVTAQIEYNTRIFTKAIGKNAIYFYAVYLILSALARDYVIDLAMVQDAGSLVLFPTTIAQSLGYSLFAAGILINLWTLKALGIKNM 118          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: A0A151ZC83_9MYCE (Phosphatidylethanolamine N-methyltransferase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZC83_9MYCE)

HSP 1 Score: 103 bits (258), Expect = 8.770e-26
Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 1
Query:    7 FGGTFCTAAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQ------AENFGDGIYLYAGGALLAFGILLNMWTLQALGIKGM 315
            F  +   A   I+LHVANYNATA  E+ TR FTK+LGKH +Y+  V+L+ SALVRD F+  A+  D        + F + I    G AL  FGILLN+WTL ALG+KGM
Sbjct:    2 FDSSLIYALVAIVLHVANYNATAQFEYKTRTFTKLLGKHTIYYNVVYLISSALVRDHFVNEAMQSDVDSLILFPQEFAEMI----GNALFVFGILLNLWTLHALGLKGM 106          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: A0A507EBS9_9FUNG (Phosphatidyl-N-methylethanolamine N-methyltransferase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EBS9_9FUNG)

HSP 1 Score: 103 bits (256), Expect = 7.350e-25
Identity = 56/106 (52.83%), Postives = 70/106 (66.04%), Query Frame = 1
Query:    4 SFGGTFCTAAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAEN--FGDGIYLYAGGALLAFGILLNMWTLQALGIKGM 315
            +F      AA  I+LHV NYNATA LEH+TR+FTK+    AVY YA++LVVSALVRD ++  A+  D      F   +    G AL+  GILLN+WTL+ALGIKGM
Sbjct:   51 TFAPIAVVAAVAIVLHVVNYNATAQLEHHTRIFTKIFRSPAVYLYALYLVVSALVRDHYVMQAIETDANSYVLFTRDMGHLIGHALIGSGILLNLWTLKALGIKGM 156          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: A0A2P6NAK1_9EUKA (Phosphatidylethanolamine N-methyltransferase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NAK1_9EUKA)

HSP 1 Score: 100 bits (250), Expect = 1.270e-24
Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 1
Query:   16 TFCTAAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAENFGDGIY----LYAGGALLAFGILLNMWTLQALGIKGM 315
            +F  A A I+LHV NYN TA +E+NTR+FT++LGKHA+Y+YAV+LV SA VRD FI   L  D    F   +     L     L  FGI LN+WTL  LGIKGM
Sbjct:    2 SFLAALAAIVLHVVNYNVTAQIEYNTRIFTRLLGKHAIYYYAVYLVSSAAVRDHFIDQQLRADS-NTFPVPLIGWLPLLTSWTLFLFGIGLNLWTLYTLGIKGM 104          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: A0A197JC80_9FUNG (Phosphatidyl-N-methylethanolamine N-methyltransferase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JC80_9FUNG)

HSP 1 Score: 100 bits (248), Expect = 4.290e-24
Identity = 56/102 (54.90%), Postives = 68/102 (66.67%), Query Frame = 1
Query:   28 AAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAENFGDGIYLYA------GGALLAFGILLNMWTLQALGIKGM 315
            A   +ILHVANYN TA  E+NTR FTKVLGK+A+YFYAV+L++SALVRD FI  A+  D     G  + L A      G      G LLN+WTL++LGIKGM
Sbjct:   34 AILAMILHVANYNVTARFEYNTRGFTKVLGKNAIYFYAVYLILSALVRDHFIHLAVAPDA----GSLVLLPATVATVLGAVCFVSGALLNLWTLKSLGIKGM 131          
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Match: A0A1Y2G683_9FUNG (Phosphatidyl-N-methylethanolamine N-methyltransferase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G683_9FUNG)

HSP 1 Score: 100 bits (248), Expect = 4.390e-24
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 1
Query:   28 AAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFLVVSALVRDEFIKYALIDDQAEN--FGDGIYLYAGGALLAFGILLNMWTLQALGIKGM 315
            A   +ILHVANYN TA  E+NT  FTK++G +A+YFYAV+LV+SAL+RD FI  A+  D      F   +    G      G+LLN+WTL ALGIKGM
Sbjct:   35 AILAMILHVANYNITARYEYNTHQFTKIIGNNAIYFYAVYLVLSALIRDHFIHLAVAQDVGSFVIFPAAVATSVGTVCFVLGVLLNLWTLNALGIKGM 132          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97119.22369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
UPI000644AC1A7.030e-2956.12hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A0L0SL61_ALLM31.100e-2855.88Phosphatidyl-N-methylethanolamine N-methyltransfer... [more]
F0ZUV5_DICPU9.710e-2754.08Phosphatidylethanolamine N-methyltransferase n=1 T... [more]
PEMT2_DICDI5.480e-2651.46Phosphatidylethanolamine N-methyltransferase B n=1... [more]
A0A1Y2HD22_9FUNG8.750e-2654.08Phosphatidyl-N-methylethanolamine N-methyltransfer... [more]
A0A151ZC83_9MYCE8.770e-2650.46Phosphatidylethanolamine N-methyltransferase n=1 T... [more]
A0A507EBS9_9FUNG7.350e-2552.83Phosphatidyl-N-methylethanolamine N-methyltransfer... [more]
A0A2P6NAK1_9EUKA1.270e-2452.88Phosphatidylethanolamine N-methyltransferase n=1 T... [more]
A0A197JC80_9FUNG4.290e-2454.90Phosphatidyl-N-methylethanolamine N-methyltransfer... [more]
A0A1Y2G683_9FUNG4.390e-2452.04Phosphatidyl-N-methylethanolamine N-methyltransfer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97119contigM-pyrifera_M_contig97119:4..373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score111.3
Seed ortholog evalue2.7e-22
Seed eggNOG ortholog28583.AMAG_17014T0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC)
EggNOG OGs3A2XU@33154,3P3PB@4751,KOG4142@1,KOG4142@2759
COG Functional cat.I
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons2
Model size315
Cds size315
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816887.5346618-CDS-M-pyrifera_M_contig97119:3..1051622816887.5346618-CDS-M-pyrifera_M_contig97119:3..105Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97119 4..105 -
1692278237.2265928-CDS-M-pyrifera_M_contig97119:3..1051692278237.2265928-CDS-M-pyrifera_M_contig97119:3..105Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97119 4..105 -
1622816887.5490246-CDS-M-pyrifera_M_contig97119:160..3731622816887.5490246-CDS-M-pyrifera_M_contig97119:160..373Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97119 161..373 -
1692278237.2394965-CDS-M-pyrifera_M_contig97119:160..3731692278237.2394965-CDS-M-pyrifera_M_contig97119:160..373Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97119 161..373 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97119.22369.1prot_M-pyrifera_M_contig97119.22369.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97119 4..373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97119.22369.1

>prot_M-pyrifera_M_contig97119.22369.1 ID=prot_M-pyrifera_M_contig97119.22369.1|Name=mRNA_M-pyrifera_M_contig97119.22369.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
MSFGGTFCTAAAGIILHVANYNATAHLEHNTRVFTKVLGKHAVYFYAVFL
VVSALVRDEFIKYALIDDQAENFGDGIYLYAGGALLAFGILLNMWTLQAL
GIKGM
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mRNA from alignment at M-pyrifera_M_contig97119:4..373-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97119.22369.1 ID=mRNA_M-pyrifera_M_contig97119.22369.1|Name=mRNA_M-pyrifera_M_contig97119.22369.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=370bp|location=Sequence derived from alignment at M-pyrifera_M_contig97119:4..373- (Macrocystis pyrifera P11B4 male)
ATGAGCTTTGGTGGCACCTTTTGCACTGCTGCGGCAGGGATCATATTGCA CGTAGCCAACTACAACGCCACGGCACATCTGGAGCACAACACGCGTGTAT TCACAAAGGTCCTTGGCAAGCATGCTGTCTACTTCTATGCCGTGTTTCTT GTGGTCAGCGCTCTGGTGAGGGACGAGTTCATCAAGTATGCGCTCATAGA TGACCAGGCAGAGGTACGCTGCGCTTGCGATCTTAGACAGGACGGCCGGA AGCTGACCGCTGGCTCAGAACTTCGGTGATGGCATCTATCTGTACGCTGG CGGAGCTCTGTTGGCTTTTGGCATTCTCTTGAACATGTGGACGCTTCAGG CACTCGGTATTAAGGGTATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97119:4..373-

>mRNA_M-pyrifera_M_contig97119.22369.1 ID=mRNA_M-pyrifera_M_contig97119.22369.1|Name=mRNA_M-pyrifera_M_contig97119.22369.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig97119:4..373- (Macrocystis pyrifera P11B4 male)
ATGAGCTTTGGTGGCACCTTTTGCACTGCTGCGGCAGGGATCATATTGCA
CGTAGCCAACTACAACGCCACGGCACATCTGGAGCACAACACGCGTGTAT
TCACAAAGGTCCTTGGCAAGCATGCTGTCTACTTCTATGCCGTGTTTCTT
GTGGTCAGCGCTCTGGTGAGGGACGAGTTCATCAAGTATGCGCTCATAGA
TGACCAGGCAGAGATGAGCTTTGGTGGCACCTTTTGCACTGCTGCGGCAG
GGATCATATTGCACGTAGCCAACTACAACGCCACGGCACATCTGGAGCAC
AACACGCGTGTATTCACAAAGGTCCTTGGCAAGCATGCTGTCTACTTCTA
TGCCGTGTTTCTTGTGGTCAGCGCTCTGGTGAGGGACGAGTTCATCAAGT
ATGCGCTCATAGATGACCAGGCAGAGAACTTCGGTGATGGCATCTATCTG
TACGCTGGCGGAGCTCTGTTGGCTTTTGGCATTCTCTTGAACATGTGGAC
GCTTCAGGCACTCGGTATTAAGGGTATGAACTTCGGTGATGGCATCTATC
TGTACGCTGGCGGAGCTCTGTTGGCTTTTGGCATTCTCTTGAACATGTGG
ACGCTTCAGGCACTCGGTATTAAGGGTATG
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