mRNA_M-pyrifera_M_contig9708.22364.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9708.22364.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI) HSP 1 Score: 306 bits (783), Expect = 8.300e-92 Identity = 230/476 (48.32%), Postives = 275/476 (57.77%), Query Frame = 1 Query: 25 ELLRRGEGREAAEHFRDAASRARILEDAHQGGAPGGQGGSVDAAVARARLSRMQAVGVAMAGDGSSAEILLRGGLQELRAG---LGVGAMSSEKEEEEGLTQAALGSLLAQGRNHAEAVVLLRAAIVALDGVITDVPT--GGKEQSSLCSAAEISPSSPPPSKTARKGLTRTLTATLAFLGTSLLALDRQPDTS--TNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMVXXXXXXXXXXVVXXXXXXXXXXXXEAVHVLKRALGMLRIEAAALSAAASAMDSSPESASKTAGAEKTTVASHDAGVDRRMKDVMAETARVLDALSEAHARARRWEQARSAAEQSLTAWRSLGDAGRAGATTSLLSIGHLVLELHGVGGGIEEASARWEEAARCSNGCA-RPSDEAEVRVKIAGFYSTVVRSDPSRLESLSGKIAAHYSAAAGFFAREREEVTFSLERAAAAVTIAEESSNTSARG 1428 E LR+G GREAA+ FRDAASRAR +DA GA G+G +V VA +R R++ + VAMAGD SAE+LLR L++LR G EEEGLT AALGSLLAQ HA+A+ LR A+ LD I V GG SS + A SP +P ++ LTRTLT TLAFLGTSLLA + QP + +NG+ V EA+ VLKRA ML+ E A++ A P AG G R DV +TA+VLD LSEA+ R +RWE+AR AAEQSLTAWRSLG AGR GA SLLS+GHL+L+LHGVG G EEASARWEEAA C GCA RPS EAEVR+KIAG+Y+ V RSDP+RLESL GKI+AHYS AA FARER+E T SL+RAA AV A+ + +A G Sbjct: 199 EHLRQGRGREAAKSFRDAASRARRRKDA--AGAEAGEG-AVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSGGVTPGVMKGGAEKVTVPAPGFSCDDKGPI----VADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAG------PGQKGGLAGVYSAV------GESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEG 655 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9708.22364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9708.22364.1 >prot_M-pyrifera_M_contig9708.22364.1 ID=prot_M-pyrifera_M_contig9708.22364.1|Name=mRNA_M-pyrifera_M_contig9708.22364.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=476bp PPPPPPPPELLRRGEGREAAEHFRDAASRARILEDAHQGGAPGGQGGSVDback to top mRNA from alignment at M-pyrifera_M_contig9708:105..4010+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9708.22364.1 ID=mRNA_M-pyrifera_M_contig9708.22364.1|Name=mRNA_M-pyrifera_M_contig9708.22364.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3906bp|location=Sequence derived from alignment at M-pyrifera_M_contig9708:105..4010+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9708:105..4010+ >mRNA_M-pyrifera_M_contig9708.22364.1 ID=mRNA_M-pyrifera_M_contig9708.22364.1|Name=mRNA_M-pyrifera_M_contig9708.22364.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2856bp|location=Sequence derived from alignment at M-pyrifera_M_contig9708:105..4010+ (Macrocystis pyrifera P11B4 male)back to top |