prot_M-pyrifera_M_contig9707.22363.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9707.22363.1
Unique Nameprot_M-pyrifera_M_contig9707.22363.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: D7FY41_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY41_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 8.880e-31
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    1 MEDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFESEE-EGEEKNAE 63
            MED++CAICLV+Y+AEDELRKLPC HAFHK C+DSWL VNASCPNCRARCFE E+ EGEEK A+
Sbjct:   49 MEDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEEDGEGEEKIAD 112          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: A0A6H5JPD9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD9_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 4.940e-29
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MEDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFESEEEGEEKNAE 63
            MED++CAIC+VDY+AEDELRKLPC HAFHK C+DSWL VNASCPNCRARCFE + EGEEK A+
Sbjct:  358 MEDDACAICIVDYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCRARCFEEDGEGEEKIAD 420          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: A0A7S3XQH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQH4_HETAK)

HSP 1 Score: 80.1 bits (196), Expect = 2.190e-16
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
Query:    1 MEDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFESEEEGEEKNAE 63
            +E+ +C ICL +Y+  +ELR LPC H+FHK+C+D WL VNA+CPNCR    + E+E E K  E
Sbjct:  216 IEEPTCPICLNEYENGEELRSLPCKHSFHKKCVDEWLLVNATCPNCRTTILDEEQEEEAKLGE 278          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: A0A8K1CPU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPU5_PYTOL)

HSP 1 Score: 79.0 bits (193), Expect = 8.800e-16
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    2 EDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFE 52
            ED+SC ICL DY+ + ELR LPC H FHKEC+D WL VN++CP CR   +E
Sbjct:  252 EDSSCCICLNDYEPQQELRVLPCEHHFHKECVDEWLIVNSTCPTCRKSIYE 302          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: I3SYV1_LOTJA (RING-type domain-containing protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SYV1_LOTJA)

HSP 1 Score: 74.3 bits (181), Expect = 3.230e-15
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    2 EDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFES 53
            ED  C ICL  Y+  DELR+LPC+H FHK+C+D WL +NASCP C++   E+
Sbjct:   81 EDAVCCICLATYENNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEIGEN 132          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: UPI000C1D0794 (E3 ubiquitin-protein ligase At4g11680-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0794)

HSP 1 Score: 74.7 bits (182), Expect = 6.660e-15
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 EDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFES 53
            ED  C ICL  Y   DELR+LPC+H FHKEC+D WL +NASCP C+A   E+
Sbjct:  127 EDAVCCICLAKYVNNDELRELPCSHFFHKECVDKWLKINASCPLCKAEVGET 178          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: A0A699K2M5_TANCI (E3 ubiquitin-protein ligase At1g63170-like (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699K2M5_TANCI)

HSP 1 Score: 71.2 bits (173), Expect = 6.900e-15
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    6 CAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFES 53
            C ICL  Y   DELR+LPC H FHK+C+D WL +NASCP C++   ES
Sbjct:    2 CCICLAKYANNDELRELPCTHFFHKDCVDKWLKINASCPLCKSEVGES 49          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: A0A4D8ZX02_SALSN (E3 ubiquitin-protein ligase RNF38/44 n=4 Tax=Salvia TaxID=21880 RepID=A0A4D8ZX02_SALSN)

HSP 1 Score: 77.0 bits (188), Expect = 7.720e-15
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    2 EDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARCFES 53
            ED SC ICL  Y   DELR+LPC+H FHK+C+D WL +NASCP C+A   E+
Sbjct:  361 EDASCCICLAKYGNNDELRELPCSHLFHKDCVDKWLKINASCPLCKAEVGET 412          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: A0A7S2UIF9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIF9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 8.640e-15
Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    2 EDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCR 47
            +D+SC ICLV+Y+  DELR LPC H  HKECLD WL+ NASCP CR
Sbjct:  866 DDDSCPICLVEYEKGDELRALPCKHEMHKECLDQWLSSNASCPACR 911          
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Match: A0A7S0GE79_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GE79_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 9.710e-15
Identity = 28/47 (59.57%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    2 EDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRA 48
            E+  C ICLV+Y+ +DE+R LPC+H FHKEC+DSW++ + SCP CRA
Sbjct:   75 EEPCCPICLVEYEEDDEIRTLPCDHYFHKECVDSWMSSHISCPACRA 121          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9707.22363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY41_ECTSI8.880e-3179.69RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JPD9_9PHAE4.940e-2979.37RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3XQH4_HETAK2.190e-1652.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1CPU5_PYTOL8.800e-1660.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
I3SYV1_LOTJA3.230e-1555.77RING-type domain-containing protein n=1 Tax=Lotus ... [more]
UPI000C1D07946.660e-1559.62E3 ubiquitin-protein ligase At4g11680-like n=1 Tax... [more]
A0A699K2M5_TANCI6.900e-1558.33E3 ubiquitin-protein ligase At1g63170-like (Fragme... [more]
A0A4D8ZX02_SALSN7.720e-1559.62E3 ubiquitin-protein ligase RNF38/44 n=4 Tax=Salvi... [more]
A0A7S2UIF9_9STRA8.640e-1567.39Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0GE79_9STRA9.710e-1559.57Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 5..47
e-value: 0.0095
score: 7.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 6..46
e-value: 3.4E-7
score: 39.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 4..47
e-value: 9.8E-16
score: 57.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 6..47
score: 12.784
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..66
e-value: 1.1E-20
score: 74.5
NoneNo IPR availablePANTHERPTHR46171FAMILY NOT NAMEDcoord: 2..54
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9707contigM-pyrifera_M_contig9707:7649..8656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9707.22363.1mRNA_M-pyrifera_M_contig9707.22363.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9707 7564..8656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9707.22363.1 ID=prot_M-pyrifera_M_contig9707.22363.1|Name=mRNA_M-pyrifera_M_contig9707.22363.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
MEDNSCAICLVDYDAEDELRKLPCNHAFHKECLDSWLTVNASCPNCRARC
FESEEEGEEKNAEAESIVDSLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD