mRNA_M-pyrifera_M_contig97059.22360.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A7X6ASM9_9ACTN (FtsW/RodA/SpoVE family cell cycle protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ASM9_9ACTN) HSP 1 Score: 286 bits (731), Expect = 1.350e-95 Identity = 149/197 (75.63%), Postives = 173/197 (87.82%), Query Frame = 1 Query: 10 RVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYDYTTR 600 R+IVLL II +T VVG+F+SDVLA+YQ+DRL VFLL DA + +L A A+VAYNAEQSQIAIGNGGL+GQGLF GTQTGSDLVP Q+TD+IFSVAGE L RGA LLL ++AV++FR+WR A+ ATD FDRLI++GVM MFLFQVFQSAGM MGMMPVTGIPLP+VSYGGSSM+TS+VA+GLVLGVHRRRYDYT R Sbjct: 16 RMIVLLSIIAVTVVVGIFRSDVLAEYQRDRLTVFLLDDAAIEDLGSEA-ARVAYNAEQSQIAIGNGGLTGQGLFRGTQTGSDLVPEQQTDFIFSVAGEELGFRGAGLLLALFAVLLFRIWRTAVRATDGFDRLISIGVMGMFLFQVFQSAGMTMGMMPVTGIPLPLVSYGGSSMLTSMVALGLVLGVHRRRYDYTDR 211
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A6B1B370_9ACTN (Rod shape-determining protein RodA n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B370_9ACTN) HSP 1 Score: 270 bits (690), Expect = 7.430e-87 Identity = 138/200 (69.00%), Postives = 170/200 (85.00%), Query Frame = 1 Query: 1 VRARVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYDYTTR 600 V+ R I L ++G VVG+F+SD+LA+YQ+DRL VF+L + L EL P A+ A+N EQSQIAIGNGGL GQGLF+GTQT S+LVP Q+TD+IFSVAGE L RGA LLLG+YA+M+FR+WRIA+ ATDSFDRL+T+G+MAMFLFQVFQSAGM MGMMPVTGIPLP+VSYGGSSM+TS+VA+GLV+GV+RRR+D+ R Sbjct: 195 VQLRYIAALAVVGTLVVVGIFESDLLAEYQEDRLQVFVLDEEALVELG-PEAARAAFNVEQSQIAIGNGGLLGQGLFQGTQTRSNLVPEQQTDFIFSVAGEELGFRGAGLLLGLYALMLFRIWRIAVRATDSFDRLLTIGMMAMFLFQVFQSAGMTMGMMPVTGIPLPLVSYGGSSMLTSMVALGLVMGVYRRRFDFAER 393
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A3M2H4T2_ACTSX (Rod shape-determining protein RodA (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H4T2_ACTSX) HSP 1 Score: 256 bits (653), Expect = 4.990e-83 Identity = 133/196 (67.86%), Postives = 159/196 (81.12%), Query Frame = 1 Query: 1 VRARVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYD 588 VRARVIV L ++ T VFQSDVLA YQ+ RL +FL + +++ P LA AYNAEQ+QIAIGNGGL+GQGLF+GTQT SDLVP Q+TD+IF+VAGE L RGA LLLG++ +++FR+WRIA+ A D FDRLI VGVM MFLFQ+FQS GM MGMMPVTGIPLP+VSYGGSSM+TSLVA+GLV GVHRRR+ Sbjct: 72 VRARVIVALALVAATGTFAVFQSDVLADYQKARLTIFLFDEEEVS----PDLAPYAYNAEQAQIAIGNGGLTGQGLFQGTQTRSDLVPEQQTDFIFTVAGEELGFRGAGLLLGLFGLLVFRIWRIAMRARDRFDRLIAVGVMVMFLFQIFQSVGMTMGMMPVTGIPLPLVSYGGSSMITSLVALGLVAGVHRRRFS 263
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A2E0T3L6_9ACTN (Rod shape-determining protein RodA (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T3L6_9ACTN) HSP 1 Score: 253 bits (647), Expect = 5.100e-82 Identity = 129/194 (66.49%), Postives = 166/194 (85.57%), Query Frame = 1 Query: 10 RVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYDY 591 R+I+LLV+ +TA+ +F SDVL YQ+DRL VF+L D +AEL A+ +VAYNAEQSQIAIGNGGL+G GLF+GTQT S+LVP Q+TD+IFSVAGE L RGA++LL ++AV++ R+WR+A+ A+D FDRL+ VGVM+MF+FQVFQSAGM MGM+PVTGIP+P VSYGGSSM+TS++AIGL+LGV+RRR+DY Sbjct: 75 RLILLLVLAAITAITMIFTSDVLEDYQKDRLTVFVLDDEAVAELGADAV-RVAYNAEQSQIAIGNGGLTGTGLFQGTQTSSNLVPEQQTDFIFSVAGEELGFRGASILLVLFAVVVVRIWRVAVRASDEFDRLMAVGVMSMFVFQVFQSAGMTMGMLPVTGIPMPFVSYGGSSMLTSMIAIGLILGVYRRRFDY 267
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A2D7RY39_9ACTN (Rod shape-determining protein RodA n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RY39_9ACTN) HSP 1 Score: 248 bits (634), Expect = 1.820e-78 Identity = 128/194 (65.98%), Postives = 163/194 (84.02%), Query Frame = 1 Query: 10 RVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYDY 591 R+I+LLV+ +TA+ +F SDVL YQ+DRL VF+L D +AEL A+ +VAYNA QSQIAIGNGGL+G GLF+GTQT S+ VP +TD+IFSVAGE L RGA++LL ++AV++ R+WR+A+ A+D FDRL+ VGVM+MF+FQVFQSAGM MGMMPVTGIP+P VSYGGSSM+TS+VAIGL+LGV+RRR+DY Sbjct: 194 RLILLLVLAAITAITMIFTSDVLEDYQKDRLTVFVLDDEAVAELGADAV-RVAYNAXQSQIAIGNGGLTGTGLFQGTQTSSNXVPEXQTDFIFSVAGEELGFRGASILLVLFAVVVVRIWRVAVRASDEFDRLMAVGVMSMFVFQVFQSAGMTMGMMPVTGIPMPFVSYGGSSMLTSMVAIGLILGVYRRRFDY 386
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A6B1EI57_9ACTN (Rod shape-determining protein RodA n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EI57_9ACTN) HSP 1 Score: 228 bits (582), Expect = 1.500e-70 Identity = 124/196 (63.27%), Postives = 151/196 (77.04%), Query Frame = 1 Query: 1 VRARVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYD 588 ++ R I LL I+ VVGV +SD LA YQ+ RL V+L + + E +D A A A+N EQ+QIAIGNGGL GQGLFEGTQT SDLVP Q+TD+IF+VAGE L RGA+LLLG+YAV++FR+WR A A F+RL+ GV MFLFQ+FQS GM MGMMPVTGIPLP+VSYGGSSM+TS+ A+GLV GV+RRR D Sbjct: 196 IKLRWIALLAIVAAVGVVGVLRSDALADYQEARLRVYLFAPS---ETNDEA-ATYAFNVEQAQIAIGNGGLRGQGLFEGTQTRSDLVPEQQTDFIFTVAGEELGLRGASLLLGLYAVLLFRIWRTAQIAATPFERLLCTGVFTMFLFQMFQSVGMTMGMMPVTGIPLPLVSYGGSSMLTSMAALGLVAGVYRRRLD 387
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A7K2E282_9ACTN (Rod shape-determining protein RodA n=10 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E282_9ACTN) HSP 1 Score: 223 bits (568), Expect = 1.800e-68 Identity = 118/196 (60.20%), Postives = 151/196 (77.04%), Query Frame = 1 Query: 1 VRARVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYD 588 ++AR I LL I+ L VGV++SD LA+YQ+ RL V+L +++ D A A A+N EQ+QIAIGNGGL GQGLF+GTQT SDLVP Q+TD+IF+VAGE L RGA+LLLG++AV++FR+WR A A F R++ G+ AM LFQ FQS GM MGMMPVTGIPLP+VSYGGSSM+T++ ++GLV GV+RRR D Sbjct: 195 IKARWIALLAIVALAGTVGVYRSDALAEYQEARLRVYLFE----SDVADEA-ASYAFNVEQAQIAIGNGGLGGQGLFQGTQTRSDLVPQQQTDFIFTVAGEELGLRGASLLLGLFAVLLFRVWRTAQLAPTQFQRMMCTGIFAMLLFQTFQSVGMTMGMMPVTGIPLPLVSYGGSSMLTTMASLGLVAGVYRRRLD 385
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A432JQW7_9ACTN (Rod shape-determining protein RodA n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A432JQW7_9ACTN) HSP 1 Score: 192 bits (488), Expect = 1.170e-56 Identity = 106/194 (54.64%), Postives = 136/194 (70.10%), Query Frame = 1 Query: 25 LVIIGL---TAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYDYTT 597 L+I+GL T +V V QSD+LA YQ RL VF+ DD A +YN EQ+Q+AIGNGGL+GQGLFEGTQ SDLVP Q+TD+IF+V E G+A++LG+ +++ R+WRI A D F L+ GV +M LFQVFQS GMA G+MP+TGIPLP+VSYGGSS+VT+ V +GLV VH RR+ +T Sbjct: 194 LLILGLLLFTGLVAVLQSDLLADYQVKRLMVFI---------DDQANTAASYNLEQAQVAIGNGGLTGQGLFEGTQNISDLVPEQQTDFIFTVIAEETGFVGSAVVLGLIGLLLARIWRIGRIADDRFGLLLAAGVFSMILFQVFQSVGMATGIMPITGIPLPLVSYGGSSVVTTFVGLGLVQSVHMRRHQRST 378
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A7C7WC16_9ACTN (Rod shape-determining protein RodA n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7WC16_9ACTN) HSP 1 Score: 191 bits (485), Expect = 3.390e-56 Identity = 103/200 (51.50%), Postives = 139/200 (69.50%), Query Frame = 1 Query: 1 VRARVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYDYTTR 600 V+ R + +L ++ +T +VGV QSDVL +YQ RL VF+ DD + +YN EQ+Q+AIGNGGL+G+GLF+GTQ S LVP Q+TD+IF+V E G A LLG+ +++ R+WRI A D F LI+ GV +M LFQVFQS GMA G+MP+TGIP P+VSYGGSS++T+ V+IGLV VH RR+++ R Sbjct: 188 VKGRHLFILGLLLVTGLVGVLQSDVLEEYQVRRLLVFV---------DDEPGTRASYNLEQAQVAIGNGGLTGRGLFQGTQNNSALVPEQQTDFIFTVVAEETGFVGGAALLGLVGLLLLRIWRIGQMADDRFGLLISAGVFSMLLFQVFQSVGMATGIMPITGIPFPLVSYGGSSLLTTFVSIGLVQSVHMRRHEHLAR 378
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Match: A0A2E8BF88_9ACTN (Rod shape-determining protein RodA n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8BF88_9ACTN) HSP 1 Score: 191 bits (484), Expect = 5.020e-56 Identity = 103/199 (51.76%), Postives = 141/199 (70.85%), Query Frame = 1 Query: 4 RARVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPALAKVAYNAEQSQIAIGNGGLSGQGLFEGTQTGSDLVPFQETDWIFSVAGEALNKRGAALLLGMYAVMIFRMWRIALNATDSFDRLITVGVMAMFLFQVFQSAGMAMGMMPVTGIPLPMVSYGGSSMVTSLVAIGLVLGVHRRRYDYTTR 600 R R +++L +I +T +V VFQS++LA YQ RL VF+ D+ A +YN EQ+Q+AIGNGGLSG GLFEGTQ SDLVP Q+TD+IF+V E G+A++LG+ +++ R+WRI A D + L+ GV +M LFQVFQS GM+ G+MP+TGIPLP+VSYGGSS++T+ +A+GLV VH RR+ + TR Sbjct: 189 RGRHLLILGLILVTGMVMVFQSELLADYQVKRLLVFV---------DEEANTAASYNLEQAQVAIGNGGLSGTGLFEGTQNISDLVPEQQTDFIFTVIAEETGFVGSAVVLGLIGLLLARVWRIGRMADDRYGMLLATGVFSMLLFQVFQSVGMSTGIMPITGIPLPLVSYGGSSILTTFIALGLVESVHMRRHHHKTR 378 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97059.22360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97059.22360.1 >prot_M-pyrifera_M_contig97059.22360.1 ID=prot_M-pyrifera_M_contig97059.22360.1|Name=mRNA_M-pyrifera_M_contig97059.22360.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp VRARVIVLLVIIGLTAVVGVFQSDVLAQYQQDRLAVFLLSDAQLAELDDPback to top mRNA from alignment at M-pyrifera_M_contig97059:108..713- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97059.22360.1 ID=mRNA_M-pyrifera_M_contig97059.22360.1|Name=mRNA_M-pyrifera_M_contig97059.22360.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig97059:108..713- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97059:108..713- >mRNA_M-pyrifera_M_contig97059.22360.1 ID=mRNA_M-pyrifera_M_contig97059.22360.1|Name=mRNA_M-pyrifera_M_contig97059.22360.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig97059:108..713- (Macrocystis pyrifera P11B4 male)back to top |