prot_M-pyrifera_M_contig110609.2226.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110609.2226.1
Unique Nameprot_M-pyrifera_M_contig110609.2226.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
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BLAST of mRNA_M-pyrifera_M_contig110609.2226.1 vs. uniprot
Match: UPI000D64FBF5 (hypothetical protein n=1 Tax=Hyphobacterium indicum TaxID=2162714 RepID=UPI000D64FBF5)

HSP 1 Score: 54.7 bits (130), Expect = 4.140e-7
Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 0 
Query:   25 NGNA-QSIATACMDTTNMPDAICTCVGNRAVEDLDENAQLFLHALIVGDKGAADTLRPQLPADQLIAASMFMVSTPQDCAR 104
            +GNA      AC+  +N   ++CTC+  +A EDL +N++ FL A +  +  A   +R ++  +++  A+MFM +    CAR
Sbjct:   60 SGNAGDDFVAACLSASNQSVSMCTCLSEKADEDLSDNSREFLIATLNEESEAVMEMRTRMDMEEMATAAMFMANASTQCAR 140
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110609.2226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000D64FBF54.140e-732.10hypothetical protein n=1 Tax=Hyphobacterium indicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..104
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..35
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.785

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110609contigM-pyrifera_M_contig110609:141..455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110609.2226.1mRNA_M-pyrifera_M_contig110609.2226.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110609 141..455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110609.2226.1 ID=prot_M-pyrifera_M_contig110609.2226.1|Name=mRNA_M-pyrifera_M_contig110609.2226.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
MNLRIGLIAALVAGLGGPVYAQDGNGNAQSIATACMDTTNMPDAICTCVG
NRAVEDLDENAQLFLHALIVGDKGAADTLRPQLPADQLIAASMFMVSTPQ
DCAR*
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