mRNA_M-pyrifera_M_contig9595.22123.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9595.22123.1 vs. uniprot
Match: D7FK07_ECTSI (Calmodulin-binding WW domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK07_ECTSI) HSP 1 Score: 636 bits (1640), Expect = 1.210e-192 Identity = 555/1336 (41.54%), Postives = 669/1336 (50.07%), Query Frame = 1
Query: 1 DAIARCAAVIKDAEADVYIRGLAVLALGRTLGRELGRSQSRDSVAVGAFRQECGGAGGVFDSLLDIVGLCTLS-------KASNAPALLDGCGVADARAIRSNCCTLISLLPSIL--------TMSN-----QTLP-----------------GGVDALGDGFKGETRRNDIPPALFGTGAPFGGWDTFVSMNVKPSPDVITLVRKKGWAARQHQQLPGSLAAGG--GTSSSRPRAHP-----GTHRGTDTRRARRNMGDGDVSRSSLRRSFTRKTDLVSPAKRPKEAQGREVCDT-----NPSSGGKDRHSGMTSQRNHATNANGHARQGKIGHARIDAETPPQSFQSMSECPASPPKLSRAKD--SKASGAHTS--TNVSSSAREAAQAD--VPLGLSTPGHQ-RNKAV--KVWHTVSLPARKERVDSKEGRQSPPAITLWPGRALERFETQPPVRPSVLFGSDPAREVEMGNEWDR-NNVITTDANLGYQIPRLWFPHAQPGQGGASWGETAPISAGVSMPEPRSQVSGGVDRQIGSDAVVQEYQQMQAFRAYSSLAMARPPSAEPLHGVDANAQLVATMGKHPEEEDAAIAQEWSPRGGRKMSIAREKSLTACTIEQHGLRSQRRSRARSLEARGRRRGDRNSLSKSPGGRGCNTRRPWQP--IHDSSGHGASLSSSLGLPRRGER-----GRYDNVQNCLIATAAPFDDEVFSNSSDGQGDDSDELRFDCSPKLDALGRGSASDPQWDQGPFRGDASRGNLGGQFAILESPYRTYRAKHARLLRARSSERAEAETRRAVL-EHLGGRGASRSRSADSVVRSERWR---GTSGMTSPLLHREGFGLLQSKTTGKVALGMQLPRDQLSAAGRARAAAAVIEERFRSSIAE-PTAMSARNVGQRKKAG-------------------------PQRGSHDDFFAGKGGLAED--GYDRPRKHPRDRSGSSDKERPNPIRRRPPFEADMPSSWSCAPKRDQSNRS-------ASAGRSRDRGKRGGGCHHTPILS-GSRKAGGYSSWSPPRTKARRRKNAAGFASPGSTANREYGAEWGSCEHGSGDAEETSVESPNRQRTLSKRDRGGRS----------DGGG-----------GRFLSPLIVPLDPYRAPLTVVRAGTLVSRKDAAGVERTSRHARRAVRWASEARAAAETPLA-DAEMASCPAGREHWGPGETPHRG-------RGRRGRDAWVVGAEDGSRQDEVGIDRMKRLLPSVEKMSRELRAIRRADAAMREEQLAQVQLNTNALPLALLLVRPGGAAEAREFIARALALWQREKTRARMTHALAR 3603
DAI R AA+IKD +A VY RG+AVLA+G+ LGRELG+ S S +V FRQECGGAGGV DS+LDI+G CT++ + APALL GCGVADA AIR+NCC L+SLL S L T SN Q P GG +G A G G FV M+ KP+PDV+ LVRKKGWAARQ QQ G GT ++R H + T R ARR G + + + T +D K A+G+ + +PS G++R + T + +G A + + + P+ QS+S+ ASPP+LSR + A G + S R+ + +PLGLS+P HQ RN + VWHTVS+ RK R ++ G +SPPAITL PG ERF TQPPVRP+VLFGSDP RE E W + NN DA LGYQ+PRLWFPHA+PGQ A SAGVSMP PR + SGG D+ IGSDAVVQEYQQMQAFR YS+LA RP SAEPLHGV+ANA LV+T+G+ PEEEDAAIAQEWSPR GR+ R D +S S PG + RRP + S G SLS S RG + GR DD+ S + G S F+ S L G + ++D + GNLGG F + SPYRTYRAKH RLLRA+SSERA A RR L E L RSRSAD R G+SGMTSPLL GFGLLQS+ T KVALG QLPRD+ SA+GR RAAAA E+ R+ P MS + +K P H D G G YD D + S P+ R A W PKR ++ S AS GR+RD G+R H S G R GG SWSPPRT+ + YGA + S +R T R+ G + DG G R LSP ++PLDPYR TVVRAG+LVSR+DAA E +SR A A R ASE+R AAE P DA + G G T RG G +G W +E+ DR++R LPSVE MSREL AI+RADAAMREEQLAQVQLNTNALPLALLLV PGGAA R+F+ARAL+LWQREK+RARMT ALAR
Sbjct: 43 DAIGRYAAIIKDVDAHVYRRGMAVLAMGKALGRELGKL-SGSSASVQKFRQECGGAGGVLDSVLDILGQCTVTSRTKAGRRRGKAPALLAGCGVADALAIRTNCCALVSLLASALLETAATRTTGSNGAENVQVAPRPDQNTDSPRMEENDKLGGXXXXXXDCEGRGADPLFQAASHGVGVDV--CTAFVPMSAKPNPDVVCLVRKKGWAARQQQQQQHVQPTEGPVGTITTRNSNHSRVCGINSLLKTKQRWARRTPGARLGGSTPVCEAATASSDHPQKCNGLKAAKGQHLDRVALNVAHPSGRGRNRDTKHTGEV-----VSGGALPREHSPSSETRQWRPRHHQSVSDRLASPPRLSRVGGGGTPAPGPRQPGRSPPSEGRRKVDNGNTVLPLGLSSPVHQDRNIPIPENVWHTVSVSRRKHRKEAPAGERSPPAITLTPGARSERFRTQPPVRPAVLFGSDPVRESEFNTYWGKDNNAFAADAKLGYQVPRLWFPHAKPGQARDHLEGRASASAGVSMPGPRPRASGGADQPIGSDAVVQEYQQMQAFRTYSALAQTRPSSAEPLHGVEANAALVSTLGRLPEEEDAAIAQEWSPRRGRRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTR--DSSSRSPRPGRKERVGRRPDNAPSVPRSPRTGTSLSCSPARRGRGRKRXXRVGRRGGGGKRTFQGPHGDDDDTLSLHTASDGGSSGRRSFEASRFL-PYGLSPSPARRYDPAAAK---PLGNLGGPFMLPGSPYRTYRAKHYRLLRAQSSERAAARARREKLRESLDKWWVPRSRSADGAGPRRARRHGSGSSGMTSPLLRGGGFGLLQSRVTQKVALGYQLPRDRCSASGRERAAAAAAEQALRAMYKPVPEPMSPGRADRNRKTTAHLRLSDSLSDEEEITYHDDDVSPRPPSAGHGDILYGDSGSDSSVAAYD-----DSDAAASGRGREGFPVTR---HFARSGMRWPSPPKRARARPSHYQRRYPASLGRTRDDGRRRRCRHQMAEESRGGRAHGGCHSWSPPRTRT-----------------QSYGA-----------FPTVTTASSSRNTTAFDREEGRETAHSGYDYYFQDGAGYERAAGYSSHRHRSLSPFLLPLDPYRGSRTVVRAGSLVSRRDAAAAEVSSRRAALANRRASESRVAAERPTTEDAPTSFSSPGHGRRGKQRTRTRGVDVGSLGGGGQGY-GWATSGAIQEEDEELRGDRIRRFLPSVESMSRELEAIKRADAAMREEQLAQVQLNTNALPLALLLVHPGGAARVRDFVARALSLWQREKSRARMTQALAR 1327
BLAST of mRNA_M-pyrifera_M_contig9595.22123.1 vs. uniprot
Match: A0A6H5KAI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI1_9PHAE) HSP 1 Score: 526 bits (1354), Expect = 6.680e-157 Identity = 526/1391 (37.81%), Postives = 650/1391 (46.73%), Query Frame = 1
Query: 1 DAIARCAAVIKDAEADVYIRGLAVLALGRTLGRELGRSQSRDSVAVGAFRQECGGAGGVFDSLLDIVGLCTLSKASNA-------PALLDGCGVADARAIRSNCCTLISLLPS-ILTMSNQTLPGGVDALGDGFKGETRRNDIPPAL----------------FGTGAP-----------FGGWDTFVSMNVKPSPDVITLVRKKGWAARQHQQLPGSLAAGG--GTSSSRPRAHP-----GTHRGTDTRRARRNMGDGDVSRSSLRRSFTRKTDLVSPAKRPKEAQGREVCD-----------TNPSSGGKDRHSGMTSQRNHATNANGHARQGKIGHARIDAETPPQSFQSMSECPASPPKLSRAKD--SKASGAHT-STNVSSSAREAAQAD-----VPLGLSTPGHQ-RNKAVKVWHTVSLPARKERVDSKEGRQSPPAITLWPGRALERFETQPPVRPSVLFGSDPAREVEMGN-----------------EWDR-NNVITTDANLGYQIPRLWFPHAQPGQGGASWGETAPISAGVSMPEPR------------------------------SQVSG-----------------GVDRQIGSDAVVQEYQQMQAFRAYSSLAMARPPSAEPLHGVDANAQLVATMGKHPEEEDAAIAQEWSPRGGRKMSIAREKSLTACTIEQHGLRSQRRSRARSLEARGRRRGDRNSLSKSPGGRGCNTRRPWQP--IHDSSGHGASLSSSLGLPRRGERGR--------YDNVQNCLIATAAPFDDEVFSNSSDGQGDDSDELRFDCSPKLDALGRGSASDPQWDQGPFRGDASRGNLGGQFAILESPYRTYRAKHARLLRARSSERAEAETRRAVL-EHLGGRGASRSRSADSVVRSERW---RGTSGMTSPLLHREGFGLLQSKTTGKVALGMQLPRDQLSAAGRARAAAAVIEERFRSS---IAEPTAMSARNVGQRKKAG-----------------------PQRGSHDDFFAGKGGLAED--GYDRPRKHPRDRSGSSDKERPNPIRRRPPFEADMPSSWSCAPKRD-------QSNRSASAGRSRDRGKRGGGCHHTPILS-GSRKAGGYSSWSPPRTKARRRKNAAGFASPGSTANREYGAEWGSCEHGSGDAEETSVESPNRQRTLSKRDRGGRSDGGGGRF-----LSPLIVPLDPYRAPLTVVRAGTLVSRKDAAGVERTSRHARRAVRWASEARAAAETPLA-DAEMASCPAGREHWGPG-------ETPHRGRGRRGRDAWVVGAEDGSRQDEVGIDRMKRLLPSVEKMSRELRAIRRADAAMREEQLAQVQLNTNALPLALLLVRPGGAAEAREFIARALALWQREKTRARMTHALAR 3603
DAI R AA+IKD++A VY RG+AVLA+G+ LGRELG+ S +S +V FRQECGGAGGV DS+LDI+G CT++ ++A PALL GCGVADA AIR+NCC L+SLL S +L + T G A +N P + G GA FV M+ KP+PDV+ LVRKKGWAARQ QQ G GT ++R H + T R ARR G R+ + + T +D P+E GR+ +PS G++R S T + +G A + + + P+ QS+S+ ASPP+LSR + A G S + S R Q D +PLGLS+P HQ RN + +P + R G +SPPAITL PG ERF TQPPVRP+VLFGSDP E+E+G+ W + NN D+ LGYQ+PRLWFPHA+PGQ G A SAGVSMP PR + SG G R++ S A + + A ++LA RP S EPLHGV+ANA LV+T+G+ PEEEDAAIAQEWSPR GR+ R D +S S PG + RRP + S G SLS S P R RGR + S + G S FD S L G + ++D + GNLGG F + SPYRTYRAKH RLLRA+SSERA A RR L E+L RSRSAD R G+SGMTSPLL GFGLLQS+ T KVALG QLPRD+ SA+GR R AAA E+ R+ + EP + + + A P + D G G YD D + S P+ R A W PKR Q AS GR+RD G+R H S G R GG SWSPPRT R + G +TA+ CE G E+ + +D G G LSP ++PLDPYR TVVRAG+LVSR+DAA E +SR A R ASE R AAE A DA + G WG + G G +G GA +E+ +R++R PSVE M REL AI+RADAAMREEQLAQVQLNTNALPLALLLV PGGAA R+F+ARAL+LWQREK+RARMT ALAR
Sbjct: 43 DAIGRYAAIIKDSDAHVYRRGMAVLAMGKALGRELGKL-SGNSASVQKFRQECGGAGGVLDSVLDILGQCTVTSPTSAGKRRGKAPALLAGCGVADALAIRTNCCALVSLLASALLGTAATTTTGSNGAENVQVAPRPDQNTDTPRMEENDKRRVGGXXXXXXXGRGADPLFQAASHGLGVDACTAFVPMSAKPNPDVVCLVRKKGWAARQQQQQQHVQPTEGPVGTITTRNSNHSRVCGINSLLKTKQRLARRTAGARVGGRNPVCEAATASSD------HPQECNGRKAAKGQHFHRVGSNVAHPSGRGRNRESKRTKEV-----VSGGALPREHSPSSETRQWRPRHHQSVSDRLASPPRLSRVGGGGTPAPGPRQPSWSPPSEGRR--QVDNGNTALPLGLSSPVHQDRN--------IPIPEKGMR-----GERSPPAITLTPGARSERFRTQPPVRPAVLFGSDPVHELEVGHFLSPITKRTDQRRQFNTYWGKDNNAFAVDSKLGYQVPRLWFPHAKPGQAGDHLEGRALASAGVSMPAPRPPXXXXXXXXXXXXXXXXXPPPAPGLPGVRTNRSGATPSSMSTSKCRRFELTGEGREVLSGAANLKMRTESKEVALAALAHTRPTSVEPLHGVEANAALVSTLGRLPEEEDAAIAQEWSPRRGRRPRRLHRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSDSSSRSPRPGRKERVGRRPDNAPSVLRSPRTGTSLSCS---PVRRVRGRKRXXXXXXXXXXXXXXFPGPHXXXXDTLSLHATSDGGSSGSRSFDASRFL-PYGLSPSPVRRYDPAAAK---PLGNLGGSFMLPGSPYRTYRAKHYRLLRAQSSERAAARARREELRENLDKWWVPRSRSADGAGRRRACPHRSGSSGMTSPLLRGGGFGLLQSRVTQKVALGYQLPRDRCSASGRERTAAAAAEQALRAMYKPVPEPISPVRADRKWKPTAHLRLSDSLSDEEEITYHDDDVSPRPPSAGYGDILNGDSGSDSSVAAYD-----DSDAAASGRGREGFPVTR---HFARAGMRWPSPPKRARTRPRHYQRRYPASLGRTRDDGRRXXXXHQMAEESRGGRAHGGCYSWSPPRT----RTQSYGAFPTVTTASSSRNTTAFDCEEGR--------ETAHSGYDYYFQDGAGYERAAGYSSHRHPSLSPFLLPLDPYRGLRTVVRAGSLVSRRDAAASEVSSRRAALVNRRASEWRVAAERHTAEDASTSFSSPGHGRWGKQRRRTLGVDVGSLGGGDQGHGRATSGAIQ-EEDEELRGNRIRRFRPSVESMGRELEAIKRADAAMREEQLAQVQLNTNALPLALLLVHPGGAARVRDFVARALSLWQREKSRARMTQALAR 1378 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9595.22123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9595.22123.1 >prot_M-pyrifera_M_contig9595.22123.1 ID=prot_M-pyrifera_M_contig9595.22123.1|Name=mRNA_M-pyrifera_M_contig9595.22123.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1202bp DAIARCAAVIKDAEADVYIRGLAVLALGRTLGRELGRSQSRDSVAVGAFRback to top mRNA from alignment at M-pyrifera_M_contig9595:820..9532- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9595.22123.1 ID=mRNA_M-pyrifera_M_contig9595.22123.1|Name=mRNA_M-pyrifera_M_contig9595.22123.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8713bp|location=Sequence derived from alignment at M-pyrifera_M_contig9595:820..9532- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9595:820..9532- >mRNA_M-pyrifera_M_contig9595.22123.1 ID=mRNA_M-pyrifera_M_contig9595.22123.1|Name=mRNA_M-pyrifera_M_contig9595.22123.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=7212bp|location=Sequence derived from alignment at M-pyrifera_M_contig9595:820..9532- (Macrocystis pyrifera P11B4 male)back to top |