prot_M-pyrifera_M_contig110540.2210.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110540.2210.1
Unique Nameprot_M-pyrifera_M_contig110540.2210.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length162
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110540.2210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032630P-type ATPase, C-terminalPFAMPF16212PhoLip_ATPase_Ccoord: 1..154
e-value: 1.5E-22
score: 80.6
IPR006539P-type ATPase, subfamily IVPANTHERPTHR24092FAMILY NOT NAMEDcoord: 1..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..162
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availableTMHMMTMhelixcoord: 86..103
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110540contigM-pyrifera_M_contig110540:109..594 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110540.2210.1mRNA_M-pyrifera_M_contig110540.2210.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110540 109..594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110540.2210.1 ID=prot_M-pyrifera_M_contig110540.2210.1|Name=mRNA_M-pyrifera_M_contig110540.2210.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
LEEDLPPQTVLQLPQLYHEGRGGAFLSTSTFLSFILSGFIDAIIAYSIPT
LALPSPTIFELGSAVFTAVLLLISLRIAHEAHAHSIPLIVALLISTIIWP
FSLQLYDSLDVDGIRGTANHLLNSPSFYLFLPVVAMLGLGRMAVARAFKR
ALWPDLRQVAAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032630P_typ_ATPase_c
IPR006539P-type_ATPase_IV