mRNA_M-pyrifera_M_contig110531.2207.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A5A8DL36_CAFRO (Holocytochrome c-type synthase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DL36_CAFRO) HSP 1 Score: 139 bits (349), Expect = 1.940e-35 Identity = 83/193 (43.01%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 7 SPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVAAVDALHVDVRPAADSVGAVLDRLRRFPERAVAGWRRKKFTAEGIDPNDLPPDLRAATSLSRSTHDTASAPLEGAKEAEEAAEEAKRLIRGEVDLVAKIAKKCASVKDALQAAETEAEVAQAHIKLTYCTATVACPDHAAAF 585
SPKAR+ + LG+G PFDRHDW+VDRGDG+ RYV+DYYFD++ E A+ + +HVDVRPA DS GA +DR+ FP RA+ + K A+G DP +P AA S+ +GA+ + A E R D +A + +KC ++ L A+TE E A + LTYC T ACP A+AF
Sbjct: 249 SPKARIKAMLGFGEPFDRHDWFVDRGDGKEVRYVLDYYFDSKV-EAADPDPKSTKCIHVDVRPAVDSPGAFVDRIMAFPGRALDALKNFKTFADGTDPEAVPEKFTAALGGGGSSR-------KGAQPSS-AVEFKTETARAAADRLATMDRKCNPLRVKLAEAKTEDEARTAFVGLTYCLGTAACPAEASAF 432
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A5A8C1V1_CAFRO (Holocytochrome-c synthase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C1V1_CAFRO) HSP 1 Score: 139 bits (349), Expect = 1.370e-34 Identity = 83/193 (43.01%), Postives = 112/193 (58.03%), Query Frame = 1
Query: 7 SPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVAAVDALHVDVRPAADSVGAVLDRLRRFPERAVAGWRRKKFTAEGIDPNDLPPDLRAATSLSRSTHDTASAPLEGAKEAEEAAEEAKRLIRGEVDLVAKIAKKCASVKDALQAAETEAEVAQAHIKLTYCTATVACPDHAAAF 585
SPKAR+ + LG+G PFDRHDW+VDRGDG+ RYV+DYYFD++ E A+ + +HVDVRPA DS GA +DR+ FP RA+ + K A+G DP +P AA S+ +GA+ + A E R D +A + +KC ++ L A+TE E A + LTYC T ACP A+AF
Sbjct: 522 SPKARIKAMLGFGEPFDRHDWFVDRGDGKEVRYVLDYYFDSKV-EAADPDPKSTKCIHVDVRPAVDSPGAFVDRIMAFPGRALDALKNFKTFADGTDPEAVPEKFTAALGGGGSSR-------KGAQPSS-AVEFKTETARAAADRLATMDRKCNPLRVKLAEAKTEDEARTAFVGLTYCLGTAACPAEASAF 705
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A7S1G7Y6_9STRA (Holocytochrome c-type synthase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7Y6_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.480e-29 Identity = 83/199 (41.71%), Postives = 102/199 (51.26%), Query Frame = 1
Query: 1 DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVA----AVDALHVDVRPAADSVGAVLDRLRRFPERAVAGWRRKKFTAEGIDPNDLPPDLRAATSLSRSTHDTASAPLEGAKEAEEAAEEAKRLIRGEVDLVAKIAKKCASVKDALQAAETEAEVAQAHIKLTYCTATVACPDHAAAF 585
+LSPKAR+ + LGYG PFDRHDW V RGDG RYVIDYY+D A++K E P AV ++ +DVRPA DSVGAV+DRLRR P R + + PP A T + + EEA E + ++ KCA+ L A E EA AQA + L C A V CPD A AF
Sbjct: 185 ELSPKARLKALLGYGEPFDRHDWVVVRGDGTELRYVIDYYYDDAASDKDEIPGLHSNDAVRSISMDVRPACDSVGAVVDRLRRLPTRVAESISKARAA---------PPATVAPTEVV-------------------SVEEAVGANPKEFTPLQRVQAKCAARHAELAACEGEAACAQASLALDVCVAGVVCPDKATAF 355
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: H3GBQ0_PHYRM (Holocytochrome c-type synthase n=19 Tax=Phytophthora TaxID=4783 RepID=H3GBQ0_PHYRM) HSP 1 Score: 94.7 bits (234), Expect = 1.950e-19 Identity = 69/198 (34.85%), Postives = 92/198 (46.46%), Query Frame = 1
Query: 4 LSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENP----VAAVDALHVDVRPAADSVGAVLDRLRRFPERAVAGWRRKKFTAEGIDPNDLPPDLRAATSLSRSTHDTASAPLEGAKEAEEAAEEAKRLIRGEVDLVAKIAKKCASVKDALQAAETEAEVAQAHIKLTYCTATVACPDHAAAF 585
L+P A V + LGYG PFDRHDW V RGD RYVIDYYFD + + + E P V ++ + RPA DSVGA++DR+ KF G PD+ A ++L TH+ AP+ E E AKI C S ++ E + +QA + L C + CP A+AF
Sbjct: 193 LTPIAWVKNVLGYGKPFDRHDWTVQRGDNTQVRYVIDYYFDDDRSAEDEVPELHSADKVKSISMYARPAVDSVGALVDRI--------------KFPVMGFLNGLKGPDITARSALVERTHEEKDAPVPLTVEEVE-------------QTFAKIKDTCKSCMQEIRTCSNEVQCSQAAMALQLCMGRIICPPQASAF 363
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A485KTK4_9STRA (Holocytochrome c-type synthase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTK4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.360e-19 Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 1 DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENP----VAAVDALHVDVRPAADSVGAVLDRLRRFPERAVAGWRRKKFTAEGIDPNDLPPDLRAATSL 339
DL+P AR+ ++LGYG PFDRHDW V R D RYVIDYYFD E +++ + P V +V ++ + RPA D +G+++DR++ FP + G K E P+ + DL A +L
Sbjct: 172 DLTPLARLKTFLGYGKPFDRHDWVVIRNDNSEHRYVIDYYFDEEKSKEDQVPRLHDVTSVKSISLYARPAIDDIGSLVDRIK-FPLLSFLGSTAKPTLPEPAAPSSIGDDLDAKETL 287
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A7S0WSL6_9CHLO (Holocytochrome c-type synthase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WSL6_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 3.700e-18 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 1 DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVAAVDALHVDVRPAADSVGAVLDRLR 234
D SPKAR+L+WLGY PFDRHDWYV+R GE RYVID+Y A + P+A +H+DVRPA D+VGA+ DRLR
Sbjct: 156 DYSPKARLLNWLGYKLPFDRHDWYVNRC-GEEVRYVIDFY---NAAPQPGQPIA----MHLDVRPALDTVGALADRLR 225
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A5B8MEV4_9CHLO (Holocytochrome c-type synthase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MEV4_9CHLO) HSP 1 Score: 88.2 bits (217), Expect = 8.720e-18 Identity = 47/85 (55.29%), Postives = 55/85 (64.71%), Query Frame = 1
Query: 1 DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVAAVDALHVDVRPAADSVGAVLDRLRRFPERAV 255
D SP+AR+L+WLGY PFDRHDW VDR GE RYVID+Y A PVA +H+DVRPA DS GA DR R F +A+
Sbjct: 162 DYSPRARMLNWLGYKLPFDRHDWVVDRC-GEKVRYVIDFY---NAPPSGPEPVA----MHLDVRPALDSFGACYDRFRMFAYQAL 238
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A7S3C9E5_9CHLO (Holocytochrome c-type synthase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C9E5_9CHLO) HSP 1 Score: 87.8 bits (216), Expect = 1.160e-17 Identity = 47/85 (55.29%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVAAVDALHVDVRPAADSVGAVLDRLRRFPERAV 255
D SP+AR+L+WLGY PFDRHDW VDR G+ RYVID+Y A PVA +H+DVRPA DS GA DRLR F +A+
Sbjct: 164 DFSPRARLLNWLGYKLPFDRHDWTVDRC-GKKVRYVIDFY---NAPPTGPQPVA----MHLDVRPALDSFGACYDRLRMFAYQAM 240
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A2P6VH05_9CHLO (Holocytochrome c-type synthase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VH05_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 1.620e-17 Identity = 49/92 (53.26%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 1 DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVAAVDALHVDVRPAADSVGAVLDRLRRFPERAVAG-WRRK 273
+ SPKAR+L+ LGY PFDRHDW VDR GE RYVID+Y A +++ PVA +H+DVRPA DS GAV DRLR +G W R+
Sbjct: 63 EYSPKARLLNLLGYKLPFDRHDWIVDRC-GEEVRYVIDFY---NAAPRSDMPVA----MHLDVRPALDSAGAVWDRLRMQLGWVASGRWTRE 146
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Match: A0A2H4R824_9EUKA (Holocytochrome c-type synthase (Fragment) n=1 Tax=Ancoracysta twista TaxID=2044563 RepID=A0A2H4R824_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 2.720e-17 Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 1 DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAENPVAAVDA----LHVDVRPAADSVGAVLDRLRRFPERAVAGWR 267
DLSPKA + S +GY PFDRHDWYV RG+ E R YVIDYY+D + ++ P + + + VD RPA DS +DR+ FP RA+A +
Sbjct: 140 DLSPKAYLKSLIGYPEPFDRHDWYVLRGEQEVR-YVIDYYYDEQMRNTSDKPPSLMSTAPSNILVDARPAVDSFSTFVDRIVMFPSRALAAMQ 231 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110531.2207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110531.2207.1 >prot_M-pyrifera_M_contig110531.2207.1 ID=prot_M-pyrifera_M_contig110531.2207.1|Name=mRNA_M-pyrifera_M_contig110531.2207.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp DLSPKARVLSWLGYGFPFDRHDWYVDRGDGEGRRYVIDYYFDAEANEKAEback to top mRNA from alignment at M-pyrifera_M_contig110531:10..594- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110531.2207.1 ID=mRNA_M-pyrifera_M_contig110531.2207.1|Name=mRNA_M-pyrifera_M_contig110531.2207.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig110531:10..594- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110531:10..594- >mRNA_M-pyrifera_M_contig110531.2207.1 ID=mRNA_M-pyrifera_M_contig110531.2207.1|Name=mRNA_M-pyrifera_M_contig110531.2207.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig110531:10..594- (Macrocystis pyrifera P11B4 male)back to top |