prot_M-pyrifera_M_contig110521.2203.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110521.2203.1
Unique Nameprot_M-pyrifera_M_contig110521.2203.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig110521.2203.1 vs. uniprot
Match: A0A7C2ALQ1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2ALQ1_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 4.530e-5
Identity = 47/125 (37.60%), Postives = 68/125 (54.40%), Query Frame = 0 
Query:    1 MNSSTRGAAKVSIMWMISVGVVALVGIVLAITANNDVTAARN---AQRSAEQETQAAVDQRTESIEKYSNLAEVVGWRG-ENGIGDSNLEAIADAKSLLRDNF-DLDESDETFEDMIPKLVAEVN 120
            M  S RGAA+VS +WMISVGVVALV +  A  + +D     +   A  +A+ E +A  D   E   K   L+  +GW   E+   +S++E    A   LR  F D+ ++D  FE ++PK+VA  N
Sbjct:    1 MLRSNRGAARVSAVWMISVGVVALVALAFAFISQSDQKKEVDRALAADAAKVEAEARADALNE---KKRELSTTLGWYDRESADPESDVEMARRALGDLRTTFPDIQDTDTDFETVLPKIVAAYN 122
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110521.2203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7C2ALQ1_9BACT4.530e-537.60Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110521contigM-pyrifera_M_contig110521:10..531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110521.2203.1mRNA_M-pyrifera_M_contig110521.2203.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110521 10..531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110521.2203.1 ID=prot_M-pyrifera_M_contig110521.2203.1|Name=mRNA_M-pyrifera_M_contig110521.2203.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
MNSSTRGAAKVSIMWMISVGVVALVGIVLAITANNDVTAARNAQRSAEQE
TQAAVDQRTESIEKYSNLAEVVGWRGENGIGDSNLEAIADAKSLLRDNFD
LDESDETFEDMIPKLVAEVNKYKQMASDAQDAAAQARQSADQARADLSTI
TNQKDSTIDDQKKALADAQQGFDD
back to top