mRNA_M-pyrifera_M_contig95264.21977.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95264.21977.1
Unique NamemRNA_M-pyrifera_M_contig95264.21977.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A5A8D034_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D034_CAFRO)

HSP 1 Score: 137 bits (345), Expect = 8.980e-34
Identity = 111/256 (43.36%), Postives = 140/256 (54.69%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXV-----------------------GDGSMGLKGRVTIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDPGDARYRSLAAIEAEKAARREAIRRQ 699
            Q FYGC R ++ L VLL+AL+  RGA L R+++HR+  LAY++LFRL E    + + R++ LL SQ  +RVHILL FLLDR   S   VE WSK LDRSF+  ++LG L R   + + +LA   A AFG   GGEGG +         XXXXXXXXXX                          G    +G VT P    +TKPRPR LPEP RIEA VK++P+P  L         SL  ++AE   RR   R Q
Sbjct:   48 QVFYGCQRHRKELRVLLSALFFNRGAHLNRADHHRITALAYLLLFRLDE----MGWARVKPLLASQGLNRVHILLRFLLDRDMTSTWLVEDWSKTLDRSFVVDKMLGGLYRAEPDITKWLAATHAAAFG---GGEGGSDTARSGAGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGHPKRG-VTRPVSPNITKPRPRFLPEPARIEATVKARPIPASL------NATSLQQLQAEADDRRRRAREQ 289          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A5A8CDM8_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDM8_CAFRO)

HSP 1 Score: 137 bits (345), Expect = 2.230e-33
Identity = 111/256 (43.36%), Postives = 140/256 (54.69%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXV-----------------------GDGSMGLKGRVTIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDPGDARYRSLAAIEAEKAARREAIRRQ 699
            Q FYGC R ++ L VLL+AL+  RGA L R+++HR+  LAY++LFRL E    + + R++ LL SQ  +RVHILL FLLDR   S   VE WSK LDRSF+  ++LG L R   + + +LA   A AFG   GGEGG +         XXXXXXXXXX                          G    +G VT P    +TKPRPR LPEP RIEA VK++P+P  L         SL  ++AE   RR   R Q
Sbjct:   53 QVFYGCQRHRKELRVLLSALFFNRGAHLNRADHHRITALAYLLLFRLDE----MGWARVKPLLASQGLNRVHILLRFLLDRDMTSTWLVEDWSKTLDRSFVVDKMLGGLYRAEPDITKWLAATHAAAFG---GGEGGSDTARSGAGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGGHPKRG-VTRPVSPNITKPRPRFLPEPARIEATVKARPIPASL------NATSLQQLQAEADDRRRRAREQ 294          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A812NDF8_9DINO (CFAP99 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NDF8_9DINO)

HSP 1 Score: 122 bits (307), Expect = 2.580e-28
Identity = 81/236 (34.32%), Postives = 124/236 (52.54%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXVGDGSMGLKGRVTIP---EPFRLTKPRPRLLPEPIRIEA--NVKSKPVPRHLVDPGDARYRSLAAIEAEKAARREAIR 693
            Q FYG  R ++ LE  L+ALY   G  L RS++ RLM++AY+++FR+ E    + +++L+ +L SQ+A+ +H+L+   +D  R+    V+ W++ LDRS++E  +L RL R+   A+ ++      AFG     EGG                        G    K R   P    PF LT+ RPR+LP+P R      +K+KP+P+ L         SLA +EA KA RRE +R
Sbjct:   48 QVFYGIERRRKVLETFLSALYHLHGNLLQRSQHTRLMVVAYLLMFRVDE----LGWKKLQVILGSQDATSMHLLVGLAMDDARMHEWVVDTWARTLDRSYIEGTILARLARYQHSAAAWMEATRHAAFGA----EGGAGSAGRGAVASGGGPSPPASQASHGRRSSKARRKPPTEARPFNLTQARPRVLPQPKRXXXXKELKAKPIPQSL------HRTSLAEVEAAKALRREELR 269          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A485KZX1_9STRA (Aste57867_13473 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZX1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.280e-23
Identity = 71/234 (30.34%), Postives = 113/234 (48.29%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXVGDGSMGLKGRVTIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDPGDARYRSLAAIEAEKAARREAIRRQV 702
            Q  YGCVR K  L+V L+  Y    A++ R++Y + MI+AY+ +FRL E    +     +  + SQ  + +H+ L++L D   L+      W + LD+ ++E++++GR+ ++  E    L  + AKAFG     E  ++                    G          TIP    +T+PRPR +PEPIRI    K+ PVP       D    +LA I+ +K  R E ++ QV
Sbjct:   45 QVLYGCVRYKDVLKVFLSNFYQDNSAKVSRNDYTKFMIMAYLAIFRLDE----IGLAAFKGFVSSQNPTAMHVFLAYLFDDAILNGPVKAEWLRLLDQDYVEAKMIGRMTKYKAEIDQILLHLHAKAFGMAAARENLKQN-------------------GGIVRVASKEPTIPIAPNITRPRPRAVPEPIRIPLESKAHPVP-------DLNKLTLADIDVQKKKRLEQMKEQV 248          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A7S3CRG9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CRG9_9SPIT)

HSP 1 Score: 102 bits (255), Expect = 4.010e-22
Identity = 80/249 (32.13%), Postives = 127/249 (51.00%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGG---------EEEXXXXXXXXXXXXXXXXXXVGDGSMGLKGRVTIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDPGDARYRSLAAIEAEKAARR----EAIRRQVEE 708
            Q FYGCVR +  L+V +   +        R++    MI AYV  FRL E    ++    R L+ SQ+  ++H L+ F+ +   L +   +PW +  D  +++  ++G +D++ +  SD L  +E KA G+  G             + +        XXXXXXXXX  G  +     +VT P+PF LTKPRP+++P+P  ++   K+ PVP++L        +S   IE +K  RR    EAIR++ EE
Sbjct:   47 QIFYGCVRYQDFLKVFIKIFFDKNPVGTNRNDQVMYMIFAYVSFFRLDE----LAIEDFRKLVMSQDPVKMHTLIQFIFNSDNLRQHLRQPWMELYDYQYIDDTIIGGIDKNYQSVSDILRIVERKATGRAAGNVSASAASHSNLSDSQSQGTLGQSXXXXXXXXXLSGAENEEAVKKVTEPKPFNLTKPRPKVIPQPQALQRETKANPVPKNLFK------KSYLDIERDKEERRKAKTEAIRKEYEE 285          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A7S1CEF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEF7_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.510e-21
Identity = 56/144 (38.89%), Postives = 85/144 (59.03%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVL-GRLDRHAEEASDYLAQIEAKAFG---KKVGGEGGEEE 420
            Q FYGCVR K+ ++V L+A Y    A + RS+Y R  IL Y+ L+RL E    +  ++ RYLL SQ+ ++VH  LSFL +   +     + W K +DR+ LE+ ++ G +D + E   D+LA+   +AFG   +  GG GG +E
Sbjct:   70 QCFYGCVRYKKPIKVFLSAFYFNNAASIQRSDYTRYAILLYLTLWRLNE----MGHKKFRYLLLSQDPTKVHHFLSFLFNHHNIKVWLKDEWCKHIDRTALENDIIAGVIDANMEWVQDFLAERYERAFGTAGEATGGAGGGKE 209          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A835ZFS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.730e-21
Identity = 65/227 (28.63%), Postives = 110/227 (48.46%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXVGDGSMGLKGR-VTIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDPGDARYRSLAAIEAEKAAR 678
            Q  YGCVR K  L++ L  +++   A + R++Y   M+L Y++LFRL E    + F + R +   ++  ++  LL ++ DR R+     + W    D  ++   +LG L+R ++  +++ A ++ K +GK+                             +    +  R  TI +PF LT+P PR +PEP++IEA  K+ P PR+L      R + L AI  E A R
Sbjct:   64 QVLYGCVRCKEPLKIFLAHMFSDLAASIERADYTLYMVLGYLLLFRLDE----LGFDKFRAITHHEDPLKICALLQYVTDRKRMQGPITQDWLTVFDLKYINDVMLGALERSSDAIAEHCALLQVKTYGKQ------------------RRRSTSTDATAEALRSVPARPATIAQPFNLTRPNPRRVPEPMKIEAVFKTGPDPRYL-----DRAKDLQAIAEENAER 263          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A1V9ZBW1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBW1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.830e-21
Identity = 66/235 (28.09%), Postives = 117/235 (49.79%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXVGDGSMGLKGRV-TIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDPGDARYRSLAAIEAEKAARREAIRRQV 702
            Q  YGCVR K  L+V L+  Y    A++ R++Y + MIL Y+ +FRL +    +     + ++ SQ  + +H+ L++L D+  L       W + LD++F+E++++G++  +  E    L  + A+AFG     E                          G + +  +  TIP    +TKP+PR +PEPIRI   +K+ PVP       +    +L+ ++ ++  RREA +++V
Sbjct:   45 QVLYGCVRYKDILKVFLSNFYQDNSAKVSRNDYTKFMILGYLCIFRLDD----IGLGTFKSIVSSQNPTSMHVFLAYLFDKTILQGPVKAEWIRLLDQAFVETEMIGKMLVYQHEIQGILDHLHARAFGMAAAKE--------------------TLKKNGGIVRVASKEPTIPIEPNITKPKPRAIPEPIRIPLEIKANPVP-------ELNNLTLSDLDEQQKKRREAAKQEV 248          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: L1IUB1_GUITC (SRCR domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IUB1_GUITC)

HSP 1 Score: 102 bits (253), Expect = 4.040e-21
Identity = 75/233 (32.19%), Postives = 117/233 (50.21%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXVGDGSMGLKGRVTIP-EPFRLTKPRPRLLPEPIRIEA-NVKSKPVPRHLVDP-GDARYRSLAAIEAEKAARREAI 690
            Q  YG +R K+ ++VLL ALY   G E+ R +Y+  M+ AY+ L RL E      FRR  +   +Q+A ++ + LSFL +   L++   E W +  D  F+E +++ +L R+  E SD + ++   A  K       +E+                  +G+G    +   T   EPF L+KPRPR+LPEP  I+  N   KP+P  + +P GD   + +   EA K AR E +
Sbjct:   48 QVVYGSMRYKKLIKVLLTALYFKHGTEVSREDYNLYMVFAYITLIRL-EDMSVPIFRRFVF---AQDAQKMFVFLSFLFNAQTLNKWMKEEWCRLYDEQFVEDELIAKLLRNLPEVSDIIERLRDLASTK-------DEDD-----------------IGEGDKVKRQLPTTKVEPFNLSKPRPRMLPEPFAIKLENPYKKPIPESVKNPDGDGTLKKVE--EARKKAREETL 250          
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Match: A0A078AAT7_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AAT7_STYLE)

HSP 1 Score: 101 bits (252), Expect = 5.320e-21
Identity = 66/239 (27.62%), Postives = 118/239 (49.37%), Query Frame = 1
Query:    1 QAFYGCVRMKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRRLRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGRLDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEXXXXXXXXXXXXXXXXXXVGDGSMGLKGRVTIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDPGDARYRSLAAIEAEKAARR----EAIRRQVE 705
            Q FYGC+R +  L+V +N  +        R++    MI  Y+  FRL E    ++    R L+ SQ++ ++++ L F  +   L     + W    D S+++ +++G ++++    S+ L ++E +A GK V      E+                   GD +     ++T  +PF LTKP+P+++P+P  +   +KS PVP++L        ++LA IE EK  RR    +A+R+Q E
Sbjct:   46 QVFYGCIRYQEFLKVFINIFFKKNSGSTNRNDATLFMIFGYLTFFRLEE----LAIEDYRKLVLSQDSVKMNVFLQFAFNTENLRNHVRDEWMSLYDFSYIDDKIIGGIEKNLPNVSEILRKVEKRATGKTVSTLSMSEDQTKFSETGGLSQMSR----GDDNDNRAKKITEQKPFNLTKPKPKVIPQPEALPREIKSNPVPKNLFK------KTLADIEKEKEDRRKQKVDAVRQQYE 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95264.21977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A5A8D034_CAFRO8.980e-3443.36Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CDM8_CAFRO2.230e-3343.36Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A812NDF8_9DINO2.580e-2834.32CFAP99 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A485KZX1_9STRA5.280e-2330.34Aste57867_13473 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3CRG9_9SPIT4.010e-2232.13Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A7S1CEF7_9STRA1.510e-2138.89Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835ZFS9_9STRA2.730e-2128.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9ZBW1_9STRA3.830e-2128.09Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
L1IUB1_GUITC4.040e-2132.19SRCR domain-containing protein n=2 Tax=Guillardia ... [more]
A0A078AAT7_STYLE5.320e-2127.62Uncharacterized protein n=1 Tax=Stylonychia lemnae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95264contigM-pyrifera_M_contig95264:23..733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.3
Seed ortholog evalue6.2e-19
Seed eggNOG ortholog42099.EPrPV00000018846
Preferred nameRPS23
KEGG koko:K02973,ko:K03124
KEGG Pathwayko03010,ko03022,ko05169,ko05203,map03010,map03022,map05169,map05203
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000462,GO:0000956,GO:0001666,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006450,GO:0006518,GO:0006605,GO:0006606,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0012505,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0017038,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030490,GO:0030867,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034063,GO:0034248,GO:0034470,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0036293,GO:0036294,GO:0042175,GO:0042221,GO:0042254,GO:0042274,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045182,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070482,GO:0070727,GO:0070887,GO:0070925,GO:0070972,GO:0071453,GO:0071456,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990145,GO:1990904,GO:2000112,GO:2000638,GO:2000640,GO:2001141
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0048@1,KOG1749@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03021
Exons1
Model size711
Cds size687
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816867.060047-CDS-M-pyrifera_M_contig95264:22..7091622816867.060047-CDS-M-pyrifera_M_contig95264:22..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95264 23..709 -
1692278224.9571025-CDS-M-pyrifera_M_contig95264:22..7091692278224.9571025-CDS-M-pyrifera_M_contig95264:22..709Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95264 23..709 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816867.0725791-UTR-M-pyrifera_M_contig95264:709..7331622816867.0725791-UTR-M-pyrifera_M_contig95264:709..733Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig95264 710..733 -
1692278224.9699523-UTR-M-pyrifera_M_contig95264:709..7331692278224.9699523-UTR-M-pyrifera_M_contig95264:709..733Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig95264 710..733 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95264.21977.1prot_M-pyrifera_M_contig95264.21977.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95264 23..709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95264.21977.1

>prot_M-pyrifera_M_contig95264.21977.1 ID=prot_M-pyrifera_M_contig95264.21977.1|Name=mRNA_M-pyrifera_M_contig95264.21977.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
MKRALEVLLNALYAARGAELPRSEYHRLMILAYVVLFRLGEGRGEVSFRR
LRYLLDSQEASRVHILLSFLLDRPRLSRACVEPWSKFLDRSFLESQVLGR
LDRHAEEASDYLAQIEAKAFGKKVGGEGGEEEGKKGEGGEGEGGGVGGVG
VGDGSMGLKGRVTIPEPFRLTKPRPRLLPEPIRIEANVKSKPVPRHLVDP
GDARYRSLAAIEAEKAARREAIRRQVEEE
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mRNA from alignment at M-pyrifera_M_contig95264:23..733-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95264.21977.1 ID=mRNA_M-pyrifera_M_contig95264.21977.1|Name=mRNA_M-pyrifera_M_contig95264.21977.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig95264:23..733- (Macrocystis pyrifera P11B4 male)
CAGGCCTTCTACGGGTGCGTGCGCATGAAGCGTGCGCTGGAGGTGCTGTT GAACGCGCTGTACGCGGCGCGAGGGGCCGAGTTGCCTCGGTCCGAGTATC ATCGTCTGATGATTCTGGCATACGTGGTACTGTTCCGGCTGGGTGAGGGC CGCGGGGAGGTGTCGTTCCGACGACTGCGGTACCTGCTTGATTCCCAAGA AGCGTCTCGAGTCCACATCCTGCTTTCCTTCCTCCTCGACCGCCCGCGCC TCTCCCGCGCCTGCGTCGAACCATGGAGCAAATTCCTAGATCGCTCCTTC CTCGAATCCCAAGTGCTCGGCAGACTAGACCGCCACGCCGAAGAAGCCAG TGACTACCTCGCGCAGATCGAGGCGAAGGCATTCGGGAAGAAGGTGGGGG GTGAGGGAGGGGAGGAGGAGGGGAAGAAGGGTGAAGGTGGTGAAGGTGAA GGTGGTGGTGTGGGAGGTGTGGGTGTGGGTGATGGGAGTATGGGGTTGAA GGGGAGGGTGACAATTCCAGAGCCTTTTCGATTGACTAAACCTCGTCCTC GATTATTGCCAGAGCCGATTCGGATTGAGGCGAACGTCAAGTCAAAACCG GTGCCTCGTCACTTGGTGGATCCTGGAGATGCGAGATATCGCTCTTTGGC AGCGATTGAGGCAGAGAAGGCTGCTCGAAGAGAAGCGATTCGGAGGCAGG TGGAAGAAGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95264:23..733-

>mRNA_M-pyrifera_M_contig95264.21977.1 ID=mRNA_M-pyrifera_M_contig95264.21977.1|Name=mRNA_M-pyrifera_M_contig95264.21977.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig95264:23..733- (Macrocystis pyrifera P11B4 male)
ATGAAGCGTGCGCTGGAGGTGCTGTTGAACGCGCTGTACGCGGCGCGAGG
GGCCGAGTTGCCTCGGTCCGAGTATCATCGTCTGATGATTCTGGCATACG
TGGTACTGTTCCGGCTGGGTGAGGGCCGCGGGGAGGTGTCGTTCCGACGA
CTGCGGTACCTGCTTGATTCCCAAGAAGCGTCTCGAGTCCACATCCTGCT
TTCCTTCCTCCTCGACCGCCCGCGCCTCTCCCGCGCCTGCGTCGAACCAT
GGAGCAAATTCCTAGATCGCTCCTTCCTCGAATCCCAAGTGCTCGGCAGA
CTAGACCGCCACGCCGAAGAAGCCAGTGACTACCTCGCGCAGATCGAGGC
GAAGGCATTCGGGAAGAAGGTGGGGGGTGAGGGAGGGGAGGAGGAGGGGA
AGAAGGGTGAAGGTGGTGAAGGTGAAGGTGGTGGTGTGGGAGGTGTGGGT
GTGGGTGATGGGAGTATGGGGTTGAAGGGGAGGGTGACAATTCCAGAGCC
TTTTCGATTGACTAAACCTCGTCCTCGATTATTGCCAGAGCCGATTCGGA
TTGAGGCGAACGTCAAGTCAAAACCGGTGCCTCGTCACTTGGTGGATCCT
GGAGATGCGAGATATCGCTCTTTGGCAGCGATTGAGGCAGAGAAGGCTGC
TCGAAGAGAAGCGATTCGGAGGCAGGTGGAAGAAGAAATGAAGCGTGCGC
TGGAGGTGCTGTTGAACGCGCTGTACGCGGCGCGAGGGGCCGAGTTGCCT
CGGTCCGAGTATCATCGTCTGATGATTCTGGCATACGTGGTACTGTTCCG
GCTGGGTGAGGGCCGCGGGGAGGTGTCGTTCCGACGACTGCGGTACCTGC
TTGATTCCCAAGAAGCGTCTCGAGTCCACATCCTGCTTTCCTTCCTCCTC
GACCGCCCGCGCCTCTCCCGCGCCTGCGTCGAACCATGGAGCAAATTCCT
AGATCGCTCCTTCCTCGAATCCCAAGTGCTCGGCAGACTAGACCGCCACG
CCGAAGAAGCCAGTGACTACCTCGCGCAGATCGAGGCGAAGGCATTCGGG
AAGAAGGTGGGGGGTGAGGGAGGGGAGGAGGAGGGGAAGAAGGGTGAAGG
TGGTGAAGGTGAAGGTGGTGGTGTGGGAGGTGTGGGTGTGGGTGATGGGA
GTATGGGGTTGAAGGGGAGGGTGACAATTCCAGAGCCTTTTCGATTGACT
AAACCTCGTCCTCGATTATTGCCAGAGCCGATTCGGATTGAGGCGAACGT
CAAGTCAAAACCGGTGCCTCGTCACTTGGTGGATCCTGGAGATGCGAGAT
ATCGCTCTTTGGCAGCGATTGAGGCAGAGAAGGCTGCTCGAAGAGAAGCG
ATTCGGAGGCAGGTGGAAGAAGAA
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