prot_M-pyrifera_M_contig110481.2188.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110481.2188.1
Unique Nameprot_M-pyrifera_M_contig110481.2188.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length151
Homology
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BLAST of mRNA_M-pyrifera_M_contig110481.2188.1 vs. uniprot
Match: A0A4Q7KCX8_9PSEU (Uncharacterized protein n=1 Tax=Herbihabitans rhizosphaerae TaxID=1872711 RepID=A0A4Q7KCX8_9PSEU)

HSP 1 Score: 57.8 bits (138), Expect = 3.230e-7
Identity = 38/120 (31.67%), Postives = 50/120 (41.67%), Query Frame = 0 
Query:   20 LPDLAFDAVLARADHGEFSACLPRLLEIVTLPEADPEYAIAVFDRLELAAWTDWPDHERRPVERLLDLWWSTELALEPGNPPLHDVLAALARLDQPLGRWLRPWLEDLDGPGARHFVALV 139
            L    F A+    D  +    LPR+LEI    +    +A   F +L  A W DWPD ERR +ER  D  W   L L P +    DVL A     + L  +L  W  +   P       L+
Sbjct:   58 LSRFGFKALTTWGDVDDLRHFLPRMLEIAVTDDGWDLHA--TFVKLATARWWDWPDGERRAIERYADALWLHVLTLMPTSRSAADVLDAFGTAFEDLTPFLVIWRAEATEPARCQLADLL 175
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110481.2188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4Q7KCX8_9PSEU3.230e-731.67Uncharacterized protein n=1 Tax=Herbihabitans rhiz... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110481contigM-pyrifera_M_contig110481:70..522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110481.2188.1mRNA_M-pyrifera_M_contig110481.2188.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110481 70..522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110481.2188.1 ID=prot_M-pyrifera_M_contig110481.2188.1|Name=mRNA_M-pyrifera_M_contig110481.2188.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
MIARSLAELWTIFAPKDSLLPDLAFDAVLARADHGEFSACLPRLLEIVTL
PEADPEYAIAVFDRLELAAWTDWPDHERRPVERLLDLWWSTELALEPGNP
PLHDVLAALARLDQPLGRWLRPWLEDLDGPGARHFVALVDDQLSSERWAE
V
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