prot_M-pyrifera_M_contig110457.2186.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110457.2186.1
Unique Nameprot_M-pyrifera_M_contig110457.2186.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length58
Homology
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BLAST of mRNA_M-pyrifera_M_contig110457.2186.1 vs. uniprot
Match: D8LRQ7_ECTSI (DnaJ Cysteine-Rich Domain-Containing Protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ7_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 9.340e-27
Identity = 43/58 (74.14%), Postives = 51/58 (87.93%), Query Frame = 0 
Query:    1 ERLKSRRNCPYCDGSGKLICAICCSAGTFATKLPGAETFSTLPCTGCSGTGYINCLNC 58
            E+LK+RRNCPYCDGSGKL+CA+C SAGTF  KLPG++T+STLPC GC+G  YI CLNC
Sbjct:  143 EKLKTRRNCPYCDGSGKLVCAVCFSAGTFTVKLPGSDTYSTLPCPGCAGNKYITCLNC 200
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BLAST of mRNA_M-pyrifera_M_contig110457.2186.1 vs. uniprot
Match: A0A2V3J075_9FLOR (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J075_9FLOR)

HSP 1 Score: 48.1 bits (113), Expect = 4.090e-5
Identity = 24/60 (40.00%), Postives = 33/60 (55.00%), Query Frame = 0 
Query:    1 ERLKSRRNCPYCDGSGKLICAICCSAGTFA--TKLPGAETFSTLPCTGCSGTGYINCLNC 58
            +R+K R+ CPYC G+GKL CA C + G     T L   E      CT C+  G++ C +C
Sbjct:   92 QRVKHRKQCPYCRGTGKLPCASCYTIGAVPSRTALTAQEV-----CTCCNERGFLQCNHC 146
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110457.2186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRQ7_ECTSI9.340e-2774.14DnaJ Cysteine-Rich Domain-Containing Protein n=2 T... [more]
A0A2V3J075_9FLOR4.090e-540.00Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 4..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110457contigM-pyrifera_M_contig110457:56..229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110457.2186.1mRNA_M-pyrifera_M_contig110457.2186.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110457 56..229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110457.2186.1 ID=prot_M-pyrifera_M_contig110457.2186.1|Name=mRNA_M-pyrifera_M_contig110457.2186.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp
ERLKSRRNCPYCDGSGKLICAICCSAGTFATKLPGAETFSTLPCTGCSGT
GYINCLNC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf