mRNA_M-pyrifera_M_contig11043.2184.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: D8LBT3_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT3_ECTSI) HSP 1 Score: 190 bits (482), Expect = 3.400e-59 Identity = 100/159 (62.89%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 13 RSVHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWVR 489
R VH EA GGFGGNNASFYE +RPGYP+ ALRAIE+EIRR L G+G LLVDLG GTGKFTR ILPF SEG E IP+P SSARAL+A QSFHWM+S+ATLREVHRVLVPGGLFV++WNTRD +RPWVR
Sbjct: 27 RWVHTEAVGGFGGNNASFYENTRPGYPAHALRAIEAEIRRSGLT-GSGELLVDLGAGTGKFTRNILPFALSEGAG----------------------------EAIPIPDSSARALVAPQSFHWMSSAATLREVHRVLVPGGLFVLMWNTRDCTRPWVR 156
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: A0A0K1ECS6_CHOCO (SAM-dependent methyltransferase n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1ECS6_CHOCO) HSP 1 Score: 138 bits (347), Expect = 1.770e-37 Identity = 73/157 (46.50%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 16 SVHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
S+H+ A GF A YER RP YP A+ + +R H G +L+DLG GTGK TR ++ S G+ L+ +EPVE MR++ A PG+ ILDG+AE IPLP +S A+IAAQSFHW + L E+HRVL P G ++WN RD WV
Sbjct: 2 SLHSLAAQGFSAA-ADAYERGRPDYPPQAIEILTDALRLH-----AGRVLLDLGAGTGKMTRLLV----SSGVRLIAVEPVEEMRQKLAGATPGLEILDGVAEAIPLPDASVDAVIAAQSFHWFHADLALPEIHRVLRPEGRVALVWNMRDTGVAWV 148
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: A0A1G8K7T5_9PSED (Methyltransferase domain-containing protein n=1 Tax=Pseudomonas panipatensis TaxID=428992 RepID=A0A1G8K7T5_9PSED) HSP 1 Score: 136 bits (343), Expect = 6.860e-37 Identity = 73/156 (46.79%), Postives = 95/156 (60.90%), Query Frame = 1
Query: 19 VHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
VHA A+ GFG A Y RP YP + L +++ + G+GS+ DLG GTGKFT +L G +V IEPV AMR Q + LP VR+L+G A+ IPLP +S A++ AQ+FHW A + LRE+HRVL PGG ++WN RD S WV
Sbjct: 4 VHASAQQGFG-REAQTYAHGRPEYPDELLGWLDASLGI-----GSGSVAADLGAGTGKFTSLLL----RSGAEVVAIEPVAAMRAQLTEHLPSVRVLNGTAQAIPLPAASLDAVLCAQAFHWFADAPALREIHRVLRPGGRLGLVWNVRDESVDWV 149
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: UPI0019141BBC (class I SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. TH03 TaxID=2796369 RepID=UPI0019141BBC) HSP 1 Score: 135 bits (340), Expect = 1.930e-36 Identity = 77/156 (49.36%), Postives = 96/156 (61.54%), Query Frame = 1
Query: 19 VHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
VH A+ GF AS Y RP YP+D L+A E D S ++DLG GTGKFTR + +S G+ +V IEPVEAMR +F K LP VRIL+G AE IPL +A+AL+ AQ+FHW A+ L E+HRVL P G ++WN RD S WV
Sbjct: 4 VHKTAQLGFS-TEASTYAHGRPDYPAD-LKAWLRETLGIDPE----STVIDLGAGTGKFTRLL----KSLGIDVVAIEPVEAMRTEFAKNLPDVRILEGTAESIPLESGTAQALVCAQAFHWFATEPALAEIHRVLKPNGRLGLIWNVRDESVDWV 149
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: A0A1V9UP80_9PSED (SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. Bc-h TaxID=1943632 RepID=A0A1V9UP80_9PSED) HSP 1 Score: 134 bits (338), Expect = 3.850e-36 Identity = 75/156 (48.08%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 19 VHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
VH A+ GF A Y + RP YP + + R L G S +VDLG GTGKFTR + P T L+G+EPV AMR +F LP VRI+ G A+ IPLP SSA A++ AQ+FHW A SA L ++HRVL PGG ++WN RD S WV
Sbjct: 4 VHNAAQVGFS-TQAGAYTQGRPDYPHELNTWL-----RGALGIGATSAVVDLGAGTGKFTRLLKPLTEH----LIGVEPVHAMRSEFAAHLPDVRIVPGTAQSIPLPDSSADAVVCAQAFHWFADSAALAQIHRVLKPGGKLGLVWNVRDESVDWV 149
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: A0A024HP93_PSEKB (Methyltransf_11 domain-containing protein n=2 Tax=Pseudomonas knackmussii TaxID=65741 RepID=A0A024HP93_PSEKB) HSP 1 Score: 133 bits (335), Expect = 1.080e-35 Identity = 76/158 (48.10%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 16 SVHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGT-GSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
+VHA AR GFG A Y RP YP + L + H+ G T GS VDLG GTGKFTR +L G + IEPV AMR + + LPGVR+L+G A+ +PL +S A++ AQ+FHW AS+A LRE+HRVL PGG ++WN RD WV
Sbjct: 3 NVHASARQGFG-LEAQTYAHGRPDYPDELLEWM------HERLGITAGSKAVDLGAGTGKFTRLLL----RSGAEVCAIEPVAAMRDKLAEELPGVRVLEGTAQGMPLADASQDAVLCAQAFHWFASAAALREIHRVLRPGGHLGLVWNVRDERVDWV 149
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: A0A3G8H8L0_9BURK (Class I SAM-dependent methyltransferase n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=A0A3G8H8L0_9BURK) HSP 1 Score: 132 bits (333), Expect = 2.110e-35 Identity = 73/157 (46.50%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 16 SVHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
++H A GF A Y R RP YP +AL R L G+ +VDLG GTGKFTR + P G S+V +EPV+AMR Q LP VR L G AE +PL +S A++ AQ+FHW A++A +RE+HRVL PGG ++WN RD + PWV
Sbjct: 3 TLHPAAAQGFS-TQADTYARGRPDYP-EAL----GHWLRDTLGVAPGATVVDLGAGTGKFTRLLAP----SGASVVAVEPVDAMRAQLSARLPDVRALAGSAESMPLADASVDAVVCAQAFHWFANAAAMREIHRVLKPGGRLGLIWNVRDEATPWV 149
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: UPI001246019B (class I SAM-dependent methyltransferase n=4 Tax=Cupriavidus pauculus TaxID=82633 RepID=UPI001246019B) HSP 1 Score: 132 bits (332), Expect = 2.970e-35 Identity = 70/157 (44.59%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 16 SVHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
++H A GF A Y R RP YP++ + R L G +VDLG GTGKFTR +LP G S++ +EPV+AMR Q LP V +L G AE +PLP +S A++ AQ+FHW A++A ++E+ RVL PGG ++WN RD S PWV
Sbjct: 3 TIHHAAAQGFSAQ-ADTYARGRPDYPAEI-----GDWLRDTLGLAEGRSVVDLGAGTGKFTRLLLP----TGTSVIAVEPVDAMRAQLSSRLPDVTVLAGSAESMPLPDASVDAVVCAQAFHWFANAAAMQEIRRVLKPGGRLGLVWNVRDESYPWV 149
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: UPI00078049B4 (class I SAM-dependent methyltransferase n=1 Tax=Aureimonas sp. AU12 TaxID=1638161 RepID=UPI00078049B4) HSP 1 Score: 132 bits (332), Expect = 3.290e-35 Identity = 73/162 (45.06%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 1 MANRRSVHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
M +H AR GFG A Y R RP YP+ + + E+ G+G L VDLG GTGKFT +L G +V IEP+ MR Q PG+RIL+G A+ IPLP +SA A++ AQ+FHW A+ L E+ RVL PGG ++WN RD S PWV
Sbjct: 1 MTTPADLHEAARIGFGAE-AEAYARGRPEYPAGIVDWLRDELGL-----GSGHLAVDLGAGTGKFTGRLL----ETGAEVVAIEPIPEMRAQLNARHPGLRILEGSAQAIPLPEASADAIVCAQAFHWFATREALAEIRRVLRPGGSLGLVWNVRDESVPWV 152
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Match: A0A329I8R9_9PSED (SAM-dependent methyltransferase n=1 Tax=Pseudomonas sp. RIT 412 TaxID=2202161 RepID=A0A329I8R9_9PSED) HSP 1 Score: 132 bits (331), Expect = 4.410e-35 Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 19 VHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGTGSLLVDLGCGTGKFTREILPFTRSEGLSLVGIEPVEAMRRQFEKALPGVRILDGIAEDIPLPGSSARALIAAQSFHWMASSATLREVHRVLVPGGLFVMLWNTRDLSRPWV 486
VH A+ GF A+ Y + RP YP + + RH L +VDLG GTGKFTR + P T L+ +EPVEAMRR+F + LP + ++DG A+ +PL S AL+ AQ+FHW A L E+HRVLVPGG ++WN RD S WV
Sbjct: 4 VHNAAQVGFS-TQAATYTQGRPDYPDELGHWL-----RHTLGIDDQRSVVDLGAGTGKFTRLLEPLTER----LIAVEPVEAMRREFARGLPRIAVIDGTAQSLPLADGSVDALVCAQAFHWFADDTALAEIHRVLVPGGRLGLVWNVRDESVDWV 149 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11043.2184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11043.2184.1 >prot_M-pyrifera_M_contig11043.2184.1 ID=prot_M-pyrifera_M_contig11043.2184.1|Name=mRNA_M-pyrifera_M_contig11043.2184.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp MANRRSVHAEARGGFGGNNASFYERSRPGYPSDALRAIESEIRRHDLHGGback to top mRNA from alignment at M-pyrifera_M_contig11043:328..3270- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11043.2184.1 ID=mRNA_M-pyrifera_M_contig11043.2184.1|Name=mRNA_M-pyrifera_M_contig11043.2184.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2943bp|location=Sequence derived from alignment at M-pyrifera_M_contig11043:328..3270- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11043:328..3270- >mRNA_M-pyrifera_M_contig11043.2184.1 ID=mRNA_M-pyrifera_M_contig11043.2184.1|Name=mRNA_M-pyrifera_M_contig11043.2184.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig11043:328..3270- (Macrocystis pyrifera P11B4 male)back to top |