prot_M-pyrifera_M_contig110411.2183.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig110411.2183.1
Unique Name	prot_M-pyrifera_M_contig110411.2183.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	177

Homology

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: UPI001C55D9CB (NACHT, LRR and PYD domains-containing protein 12-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=UPI001C55D9CB)

HSP 1 Score: 58.9 bits (141), Expect = 6.260e-7
Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 0

Query:   47 SQLGSLRLDGNTGIGNEGVSALAAGLGSS-ASLRHLDLGNCGITEDGARALASAIANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSIDLSHATIGVEGARSLASTLR 169
            S L  L L GN  IG+ GV+ L+AGL      L  L L +CGIT++G  ALASA+ +  P    H         L+L GN++GN    L S  L +P  +L  + L+   I  EG  +LAS LR
Sbjct: 1181 SHLRELNLSGNE-IGDSGVTLLSAGLADPHCKLEKLWLRDCGITDEGCAALASALTS-NPSHLGH---------LSLTGNKLGNS-VNLLSDVLQNPHCKLEKLWLNDCDIKDEGCAALASALR 1292

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: A0A8C1SXY7_CYPCA (Uncharacterized protein n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1SXY7_CYPCA)

HSP 1 Score: 57.4 bits (137), Expect = 1.370e-6
Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 0

Query:   39 AATLLQKCSQLGSLRLDGNTGIGNEGVSALAAGLGSS-ASLRHLDLGNCGITEDGARALASAIANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSIDLSHATIGVEGARSLASTLR 169
            A+ L    S L  L L GN  +G  GV  L+ GL      L  L L +CG+T++G  ALASA+ +    +  H RE      L L+GN++G  G  L S  L  P  +L ++ L    +  EG  +LAS LR
Sbjct:   27 ASALRSNPSHLRQLNLSGNK-LGASGVKLLSDGLKDPHCKLEKLWLSDCGVTDEGCAALASALKS----NPSHLRE------LDLSGNKLGVSGVKLLSDGLKDPHCKLETLWLRDCGVTDEGCAALASALR 147

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: A8IJ76_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IJ76_CHLRE)

HSP 1 Score: 54.7 bits (130), Expect = 1.490e-5
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0

Query:   48 QLGSLRLDGNTGIGNEGVSALAAGLGSSASLRHLDLGNCGITEDGARALASAIANGRPG 106
            +L +L L  N  +G  G +ALAAGL ++ASLR LDL NCG+T  G  ALA+A+    PG
Sbjct:  121 RLAALALSNNRLLGPGGATALAAGLAANASLRRLDLANCGVTAPGVVALAAALRPEAPG 179

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: A0A2K3D378_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D378_CHLRE)

HSP 1 Score: 54.7 bits (130), Expect = 1.710e-5
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0

Query:   48 QLGSLRLDGNTGIGNEGVSALAAGLGSSASLRHLDLGNCGITEDGARALASAIANGRPG 106
            +L +L L  N  +G  G +ALAAGL ++ASLR LDL NCG+T  G  ALA+A+    PG
Sbjct:  236 RLAALALSNNRLLGPGGATALAAGLAANASLRRLDLANCGVTAPGVVALAAALRPEAPG 294

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: A0A8C1WN48_CYPCA (NACHT domain-containing protein n=4 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1WN48_CYPCA)

HSP 1 Score: 54.7 bits (130), Expect = 1.720e-5
Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 0

Query:   36 GYAAATLLQKCSQLGSLRLDGNTGIGNEGVSALAAGLGSS-ASLRHLDLGNCGITEDGARALASAIANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSIDLSHATIGVEGARSLASTLR 169
            G   + L    S L  L L GN  +G+ GV+ L+A L      L  L L NCGIT++G  ALASA+ +    +  H      L  L L GN++G+    L S  L  P  +L  + LS+  +  EG  +LAS LR
Sbjct:  880 GALTSALRSNPSHLRQLSLSGNK-VGDSGVTLLSAVLEDPHCKLEILWLCNCGITDEGCAALASALRS----NLSH------LRKLNLTGNKVGDS-VNLLSAVLEDPHCKLERLWLSNCGVTDEGCAALASALR 1002

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: UPI00201470A3 (ribonuclease inhibitor-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI00201470A3)

HSP 1 Score: 51.2 bits (121), Expect = 3.760e-5
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0

Query:   79 RHLDLGNCGITEDGARALASAIANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSIDLSHATIGVEGARSLASTLR 169
            R  +L +CG+T++G  ALASA+   RP +  H      L  + L+GN++G+ G  + S  L +P  +L  +  S+  +  EG  +LAS LR
Sbjct:    9 RSAELWDCGVTDEGCAALASAL---RP-NPSH------LRKMHLSGNKLGDSGVKMISAVLENPHCKLEDLGFSNCGVTDEGCAALASALR 89

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: A0A835WR90_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WR90_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 5.770e-5
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0

Query:   48 QLGSLRLDGNTGIGNEGVSALAAGLGSSASLRHLDLGNCGITEDGARALASAI 100
            +L +L L  N  +G  G +ALAAGL ++ASLR LDL NCG+T  G  ALA+A+
Sbjct:  239 RLAALALPNNRLLGPSGAAALAAGLAANASLRRLDLANCGVTAPGVVALAAAL 291

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: F1QBA5_DANRE (Si:ch211-233m11.1 n=2 Tax=Danio rerio TaxID=7955 RepID=F1QBA5_DANRE)

HSP 1 Score: 53.1 bits (126), Expect = 5.810e-5
Identity = 50/138 (36.23%), Postives = 63/138 (45.65%), Query Frame = 0

Query:   39 AATLLQKCSQLGSLRLDGNTGIGNEGVSALAAGLGSS-ASLRHLDLGNCGITEDGARALASAIANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSIDLSHATIGVEGARSLASTLRLRCSTF 175
            A  L    S L  L L GN  +G+ GV  L+AGL +    L  L L NCGIT  G  ALASA+ +    +         L  L L  NR+ + G  L S  L  P  +L  + L +  I  E    LASTL+L  S  
Sbjct:  838 ALALRSASSNLRELDLIGNR-LGDSGVKLLSAGLKNPHCKLEALRLKNCGITNKGCDALASALRSVSTAN---------LRELDLCDNRLRDSGVRLLSARLEDPHCKLEKLRLCNCEI--EDCADLASTLKLNSSNL 963

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: A8HAK5_DANRE (NLR family CARD domain-containing 8 n=4 Tax=Danio rerio TaxID=7955 RepID=A8HAK5_DANRE)

HSP 1 Score: 52.8 bits (125), Expect = 7.830e-5
Identity = 60/195 (30.77%), Postives = 85/195 (43.59%), Query Frame = 0

Query:    4 ETGAKLLLEAAERAASSLVRVSLSRNSLGVSSGYAAATLLQKCSQLGSLRLDGNTGIGNEGVSALAAGLGSSAS-LRHLDLG----------------------------NCGITEDGARALASAIANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSIDLSHATIGVEGARSLASTLR 169
            + G   L+ A       L  ++LS N+LG S    +A L     +L  LRL    G+ +EG +ALA+ L S+   LR LDL                             NCG+T++G  ALASA+ +     RD          L L+GN++G+    L S  L  P  +L  + LS   +  EG  +LAS LR
Sbjct:  795 DEGCAALVSALRSNPEHLRELNLSGNNLGDSVTLLSAVLEDPHCKLEKLRLY-YCGLTDEGCAALASALRSNPEHLRDLDLSWNKLGDSVTLLSAVLEDPRCKLEKLELYNCGLTDEGCAALASALRSNPEHLRD----------LNLSGNKLGDS-VTLLSAVLEDPRCKLEKLWLSDCGLTDEGCAALASALR 977

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BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Match: UPI0020144243 (NACHT, LRR and PYD domains-containing protein 12-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020144243)

HSP 1 Score: 52.8 bits (125), Expect = 7.880e-5
Identity = 57/195 (29.23%), Postives = 84/195 (43.08%), Query Frame = 0

Query:    4 ETGAKLLLEAAERAASSLVRVSLSRNSLGVSSGYAAATLLQKCSQLGSLRLDGNTGIGNEGVSALAAGLGSSAS-----------------------------LRHLDLGNCGITEDGARALASAIANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSIDLSHATIGVEGARSLASTLR 169
            + G   L  A     S L  + LS N +G S    +A L     +L +L L  + G+ +EG +ALA+ L S+ S                             L  L+L +CG+T++G  ALASA+ +    +  H      L  L+L+ N+IG     L S  L  P  +L  + LS   +  EG  +LAS LR
Sbjct:  773 DEGCAALASALRSNPSHLRELDLSENKIGQSVNLLSAVLQDPHCKLETLELS-DCGVTDEGCAALASALRSNPSHLRELDLSWNKIGQSVNLLSAVLQDPHCKLEKLELSDCGVTDEGCAALASALGS----NPSH------LRVLSLSENKIGQS-VNLLSDVLQDPHCKLEKLRLSDCGVTDEGCAALASALR 955

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig110411.2183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
UPI001C55D9CB	6.260e-7	39.52	NACHT, LRR and PYD domains-containing protein 12-l...	[more]
A0A8C1SXY7_CYPCA	1.370e-6	36.36	Uncharacterized protein n=2 Tax=Cyprinus carpio Ta...	[more]
A8IJ76_CHLRE	1.490e-5	50.85	Predicted protein n=1 Tax=Chlamydomonas reinhardti...	[more]
A0A2K3D378_CHLRE	1.710e-5	50.85	Uncharacterized protein n=1 Tax=Chlamydomonas rein...	[more]
A0A8C1WN48_CYPCA	1.720e-5	36.30	NACHT domain-containing protein n=4 Tax=Cyprinus c...	[more]
UPI00201470A3	3.760e-5	35.16	ribonuclease inhibitor-like n=1 Tax=Megalobrama am...	[more]
A0A835WR90_9CHLO	5.770e-5	52.83	Uncharacterized protein n=1 Tax=Chlamydomonas schl...	[more]
F1QBA5_DANRE	5.810e-5	36.23	Si:ch211-233m11.1 n=2 Tax=Danio rerio TaxID=7955 R...	[more]
A8HAK5_DANRE	7.830e-5	30.77	NLR family CARD domain-containing 8 n=4 Tax=Danio ...	[more]
UPI0020144243	7.880e-5	29.23	NACHT, LRR and PYD domains-containing protein 12-l...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 75..99 e-value: 36.0 score: 10.2 coord: 46..71 e-value: 13.0 score: 13.6 coord: 143..167 e-value: 400.0 score: 2.0
None	No IPR available	SMART	SM00368	LRR_RI_2	coord: 18..45 e-value: 41.0 score: 5.8 coord: 75..102 e-value: 4.7E-5 score: 32.8 coord: 143..170 e-value: 0.11 score: 21.6 coord: 114..141 e-value: 5.1 score: 12.2 coord: 46..74 e-value: 61.0 score: 4.5
None	No IPR available	PANTHER	PTHR24113	FAMILY NOT NAMED	coord: 7..173
None	No IPR available	PANTHER	PTHR24113:SF5	RAN GTPASE-ACTIVATING PROTEIN	coord: 7..173
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 5..169
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 112..176 e-value: 8.6E-9 score: 37.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 3..108 e-value: 2.9E-19 score: 71.0
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 117..135 e-value: 0.36 score: 11.0 coord: 144..165 e-value: 0.023 score: 14.7 coord: 46..69 e-value: 0.017 score: 15.1 coord: 75..97 e-value: 9.8E-4 score: 19.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig110411	contig	M-pyrifera_M_contig110411:28..558 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig110411.2183.1	mRNA_M-pyrifera_M_contig110411.2183.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig110411 28..558 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig110411.2183.1 ID=prot_M-pyrifera_M_contig110411.2183.1|Name=mRNA_M-pyrifera_M_contig110411.2183.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
MDDETGAKLLLEAAERAASSLVRVSLSRNSLGVSSGYAAATLLQKCSQLG
SLRLDGNTGIGNEGVSALAAGLGSSASLRHLDLGNCGITEDGARALASAI
ANGRPGSRDHGREGLLLHTLTLAGNRIGNGGAVLFSGALASPLSRLRSID
LSHATIGVEGARSLASTLRLRCSTFSR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006553	Leu-rich_rpt_Cys-con_subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt