mRNA_M-pyrifera_M_contig94287.21768.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: A0A812Y9A2_9DINO (TalB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Y9A2_9DINO) HSP 1 Score: 100 bits (248), Expect = 1.100e-22 Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 1 KLVWQIMLFAESIVNSKDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPAPHVRLTKMKPRNWEQMIF 294
K V+Q LF E++V+S DP +I ++++Q YNII+G YPC+ +AV LAALQ+ +KFG H+ VHK GYLT TL+EY+PAP ++E ++
Sbjct: 91 KFVFQCKLFTETLVDSGDPAIIRLLFIQGVYNIITGTYPCNYSDAVQLAALQLQSKFGEHKPAVHKMGYLTNTLHEYVPAPWTDADSFDKADFEAQVY 188
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: A0A812QKB1_9DINO (TLN1 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812QKB1_9DINO) HSP 1 Score: 91.3 bits (225), Expect = 1.400e-19 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 KLVWQIMLFAESIVNSKDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPAPHV 249
KLV QI LF E +++SKD ++ +M+Y+Q YN+ISG YP D+++A+ LA+LQ + KFG + E HKPG+L + L E+IP H+
Sbjct: 37 KLVCQIHLFTEGLMDSKDERIREMLYMQTVYNVISGMYPTDKEDALKLASLQFVHKFGELKPETHKPGFLGSKLREFIPIAHI 119
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: A9UXG5_MONBE (Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXG5_MONBE) HSP 1 Score: 60.1 bits (144), Expect = 2.290e-8 Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 52 DPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPAPHVRLTKMKPRNWEQMIF 294
DP V+ +++ Q ++ +S ++P ++ HLA L + +F H+ E H G+LT TL ++PA H++ ++P WE+ IF
Sbjct: 446 DPVVLKLLFEQALHSYLSSEWPVSLDDSAHLAGLLMQIRFADHKGESHTLGFLTGTLQTFVPA-HLQHA-LRPAEWERRIF 524
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: UPI000C76B917 (FERM domain-containing protein 8-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76B917) HSP 1 Score: 57.8 bits (138), Expect = 1.410e-7 Identity = 20/68 (29.41%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 49 KDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPAPHVR 252
KD K++++++ + YNI++G+YPC+ + + L +Q + GP+ H P ++ L ++P VR
Sbjct: 244 KDQKILELLFEEAKYNILTGRYPCEVSDYIMLGGIQARLELGPYDISTHTPSFIRQNLERFLPEHAVR 311
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: A0A6J2YPG7_SITOR (putative FERM domain-containing protein FRMD8P1 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YPG7_SITOR) HSP 1 Score: 56.6 bits (135), Expect = 3.600e-7 Identity = 22/68 (32.35%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 49 KDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPAPHVR 252
KD K+++++Y +C YNI++G+YP + + L +Q + GP+ +VH + ++++PA HVR
Sbjct: 269 KDQKILELLYEECKYNILNGRYPSEIPHLIMLGGIQAREELGPYNPQVHNTHFFREEQSKFLPA-HVR 335
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: UPI00094EB040 (FERM domain-containing protein 8 n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=UPI00094EB040) HSP 1 Score: 55.8 bits (133), Expect = 6.740e-7 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 1 KLVWQIMLFAESIVNS--KDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPAPHVR 252
KLV+Q +F + KD K+++++Y +C YN+++G+YP + + L +Q + GP+ +VH + ++++PA HVR
Sbjct: 269 KLVFQRNIFVAKQLEERIKDQKILELLYEECKYNVLNGRYPSEIAYLIMLGGIQAREELGPYNVQVHTTHFFREQQSKFLPA-HVR 353
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: U4UZF7_DENPD (FERM domain-containing protein n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4UZF7_DENPD) HSP 1 Score: 55.5 bits (132), Expect = 8.970e-7 Identity = 26/86 (30.23%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 1 KLVWQIMLFAESIVNS--KDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPAPHVR 252
KLV+Q +F + KD K+++++Y +C YN+++G+YP + + L +Q + GP+ +VH + ++++PA HVR
Sbjct: 140 KLVFQRNIFVTKQLEERIKDQKILELLYEECKYNVLNGRYPSEIAYLIMLGGIQAREELGPYNLQVHTTHFFREQQSKFLPA-HVR 224
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: A0A553ND89_TIGCA (FERM domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553ND89_TIGCA) HSP 1 Score: 55.1 bits (131), Expect = 1.290e-6 Identity = 19/66 (28.79%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 40 VNSKDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIP 237
V +D KV++++Y + YNI++G+YPC+ + + L +Q + GP+ +E H + + + ++P
Sbjct: 533 VKLRDNKVLELLYEEAKYNILTGRYPCEISDYIMLGGIQARLELGPYESETHTSSFFRSIMYRFLP 598
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: A0A0K2TXU0_LEPSM (FERM domain-containing protein n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TXU0_LEPSM) HSP 1 Score: 54.7 bits (130), Expect = 1.730e-6 Identity = 19/66 (28.79%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 40 VNSKDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIP 237
V +D K+++++Y + YNI++G+YPC+ + V L +Q + G + ++H P Y + + ++P
Sbjct: 362 VKIRDHKILELLYEEAKYNILTGQYPCELSDYVMLGGIQARLELGTYDQDIHTPSYFRSIMYRFLP 427
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Match: A0A670ZST7_PSETE (FERM domain containing 8 n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670ZST7_PSETE) HSP 1 Score: 49.7 bits (117), Expect = 9.620e-5 Identity = 20/64 (31.25%), Postives = 36/64 (56.25%), Query Frame = 1
Query: 49 KDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKFGPHRAEVHKPGYLTATLNEYIPA 240
+D V+ ++Y + YNI+ G+YPCD+ + L AL GP+ + H +L L+ ++P+
Sbjct: 136 QDEDVLRLLYEEAKYNILEGRYPCDQADCDALGALVCRINLGPYNPQQHTASFLKEKLDCFLPS 199 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94287.21768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94287.21768.1 >prot_M-pyrifera_M_contig94287.21768.1 ID=prot_M-pyrifera_M_contig94287.21768.1|Name=mRNA_M-pyrifera_M_contig94287.21768.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp MLFAESIVNSKDPKVIDMMYLQCTYNIISGKYPCDEKEAVHLAALQVLAKback to top mRNA from alignment at M-pyrifera_M_contig94287:293..592+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94287.21768.1 ID=mRNA_M-pyrifera_M_contig94287.21768.1|Name=mRNA_M-pyrifera_M_contig94287.21768.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig94287:293..592+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94287:293..592+ >mRNA_M-pyrifera_M_contig94287.21768.1 ID=mRNA_M-pyrifera_M_contig94287.21768.1|Name=mRNA_M-pyrifera_M_contig94287.21768.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig94287:293..592+ (Macrocystis pyrifera P11B4 male)back to top |