prot_M-pyrifera_M_contig110393.2175.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110393.2175.1
Unique Nameprot_M-pyrifera_M_contig110393.2175.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length123
Homology
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A5A8E375_CAFRO (AAA domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8E375_CAFRO)

HSP 1 Score: 203 bits (517), Expect = 1.810e-62
Identity = 100/122 (81.97%), Postives = 118/122 (96.72%), Query Frame = 0
Query:    2 QLSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            +L+D+VGNEP+VERLK I + GNMNN+ILAGPPGTGKTTS++CLARA+LGPA +K+AVLELNASDDRGIDVVRNKIK+FAQKKVTLPPGRHKI+ILDEADSMT++AQQ+LRRTME++SSTTR
Sbjct:   56 ELADIVGNEPIVERLKIIGEEGNMNNMILAGPPGTGKTTSVLCLARALLGPA-MKDAVLELNASDDRGIDVVRNKIKVFAQKKVTLPPGRHKIIILDEADSMTASAQQALRRTMEVFSSTTR 176          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A5D6XUN5_9STRA (AAA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUN5_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.490e-57
Identity = 98/121 (80.99%), Postives = 111/121 (91.74%), Query Frame = 0
Query:    3 LSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            LSDVVGN   +E L+A+A  GNM N+I++GPPGTGKTTSI+CLAR +LGPAV K+AVLELNASDDRGID VRNKIKMFAQ+KVTLPPGRHKIVILDEADSMT+AAQQ+LRRTMEI+SSTTR
Sbjct:   18 LSDVVGNADTIECLRAMAKDGNMTNLIISGPPGTGKTTSILCLARELLGPAV-KQAVLELNASDDRGIDTVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTTAAQQALRRTMEIFSSTTR 137          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: F2U8I7_SALR5 (Replication factor C subunit 2 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8I7_SALR5)

HSP 1 Score: 189 bits (481), Expect = 1.530e-57
Identity = 94/121 (77.69%), Postives = 110/121 (90.91%), Query Frame = 0
Query:    3 LSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            L D+VGNE  V+RLK IA+AGNM N+I+AGPPGTGKTTSI+CLARA+LG  V KEAV+E NASDDRGI+VVRN IKMF++KKVTLPPGRHKIVILDE DSMTSAAQQ+LRRTME++++TTR
Sbjct:   14 LKDIVGNEETVDRLKVIAEAGNMPNLIIAGPPGTGKTTSILCLARALLGEDVYKEAVMETNASDDRGIEVVRNNIKMFSRKKVTLPPGRHKIVILDEVDSMTSAAQQALRRTMEMYANTTR 134          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A6F8ZZN9_9TELE (AAA domain-containing protein n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F8ZZN9_9TELE)

HSP 1 Score: 184 bits (466), Expect = 4.240e-57
Identity = 94/123 (76.42%), Postives = 110/123 (89.43%), Query Frame = 0
Query:    1 LQLSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            L+L+++VGNE  V RL+  A  GN+ NII+AGPPGTGKTTSI+CLARA+LGPA +K+AVLELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHKI+ILDEADSMT  AQQ+LRRTMEI+S TTR
Sbjct:   42 LKLNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPA-MKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTR 163          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A2D4C0G1_PYTIN (Replication factor C subunit 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0G1_PYTIN)

HSP 1 Score: 188 bits (478), Expect = 4.580e-57
Identity = 97/121 (80.17%), Postives = 111/121 (91.74%), Query Frame = 0
Query:    3 LSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            LSDVVGN   ++ L+A+A  GNM N+I+AGPPGTGKTTSI+CLAR +LGPA +K+AVLELNASDDRGID VRNKIKMFAQ+KVTLPPGRHKIVILDEADSMT+AAQQ+LRRTMEI+SSTTR
Sbjct:   18 LSDVVGNAETIDCLRAMARDGNMTNLIIAGPPGTGKTTSILCLARELLGPA-MKQAVLELNASDDRGIDTVRNKIKMFAQQKVTLPPGRHKIVILDEADSMTAAAQQALRRTMEIFSSTTR 137          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A0G4G9B3_9ALVE (AAA domain-containing protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G9B3_9ALVE)

HSP 1 Score: 183 bits (465), Expect = 5.140e-57
Identity = 95/122 (77.87%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    2 QLSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            +L+DVVGN+  V+RLKAIA+ GN+ NII++GPPGTGKTTSI+CLA  +LG +  K AVLELNASDDRGIDVVRNKIKMFAQ+KV+LPPGRHKIVILDEADSMT AAQQ++RRTMEI+SSTTR
Sbjct:   12 KLADVVGNDLTVDRLKAIAEDGNLPNIIISGPPGTGKTTSILCLATELLG-SYRKNAVLELNASDDRGIDVVRNKIKMFAQQKVSLPPGRHKIVILDEADSMTEAAQQAMRRTMEIYSSTTR 132          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A7K8X6B8_9PICI (RFC2 factor (Fragment) n=1 Tax=Eubucco bourcierii TaxID=91767 RepID=A0A7K8X6B8_9PICI)

HSP 1 Score: 183 bits (465), Expect = 5.650e-57
Identity = 94/123 (76.42%), Postives = 109/123 (88.62%), Query Frame = 0
Query:    1 LQLSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            ++L ++VGNE  V RL+  A  GN+ NII+AGPPGTGKTTSI+CLARA+LGPA LK+AVLELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHKI+ILDEADSMT  AQQ+LRRTMEI+S TTR
Sbjct:   47 MKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPA-LKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTR 168          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A7S0WJW7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WJW7_9CHLO)

HSP 1 Score: 187 bits (476), Expect = 1.140e-56
Identity = 96/121 (79.34%), Postives = 108/121 (89.26%), Query Frame = 0
Query:    3 LSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            + D+VGN+  V RL+ IA+ GNM N+ILAGPPGTGKTTSI+CLA  +LGP   KEAVLELNASDDRGIDVVRNKIKMF+QKKVTLPPGRHK+VILDEADSMTS AQQ+LRRTMEI+SSTTR
Sbjct:   32 IKDIVGNDEAVSRLQVIAEEGNMPNLILAGPPGTGKTTSILCLASQLLGPNY-KEAVLELNASDDRGIDVVRNKIKMFSQKKVTLPPGRHKVVILDEADSMTSGAQQALRRTMEIYSSTTR 151          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: A0A7S4KKA6_9EUKA (Hypothetical protein n=2 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KKA6_9EUKA)

HSP 1 Score: 187 bits (474), Expect = 1.220e-56
Identity = 95/121 (78.51%), Postives = 104/121 (85.95%), Query Frame = 0
Query:    3 LSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            + DVVGNE  V RL+ IA  GNM NII+AGPPGTGKTTSI+CLAR +LGP   KE VLELNASDDRGI +VR KIKMFAQKKVTLPPGRHKIVILDEAD +TSAAQQ+LRRTMEI+S TTR
Sbjct:    1 MEDVVGNEETVSRLRVIAKEGNMPNIIIAGPPGTGKTTSILCLARQLLGPEKAKEGVLELNASDDRGISIVREKIKMFAQKKVTLPPGRHKIVILDEADQITSAAQQALRRTMEIYSDTTR 121          
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Match: UPI001FB0F011 (replication factor C subunit 2 isoform X2 n=1 Tax=Homo sapiens TaxID=9606 RepID=UPI001FB0F011)

HSP 1 Score: 182 bits (462), Expect = 2.430e-56
Identity = 93/123 (75.61%), Postives = 110/123 (89.43%), Query Frame = 0
Query:    1 LQLSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAMLGPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSAAQQSLRRTMEIWSSTTR 123
            ++L+++VGNE  V RL+  A  GN+ NII+AGPPGTGKTTSI+CLARA+LGPA LK+A+LELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHKI+ILDEADSMT  AQQ+LRRTMEI+S TTR
Sbjct:   45 VKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPA-LKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTR 166          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110393.2175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8E375_CAFRO1.810e-6281.97AAA domain-containing protein n=3 Tax=Sar TaxID=26... [more]
A0A5D6XUN5_9STRA1.490e-5780.99AAA domain-containing protein n=1 Tax=Pythium bras... [more]
F2U8I7_SALR51.530e-5777.69Replication factor C subunit 2 n=1 Tax=Salpingoeca... [more]
A0A6F8ZZN9_9TELE4.240e-5776.42AAA domain-containing protein n=1 Tax=Coregonus sp... [more]
A0A2D4C0G1_PYTIN4.580e-5780.17Replication factor C subunit 2 n=1 Tax=Pythium ins... [more]
A0A0G4G9B3_9ALVE5.140e-5777.87AAA domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A7K8X6B8_9PICI5.650e-5776.42RFC2 factor (Fragment) n=1 Tax=Eubucco bourcierii ... [more]
A0A7S0WJW7_9CHLO1.140e-5679.34Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S4KKA6_9EUKA1.220e-5678.51Hypothetical protein n=2 Tax=Paramoeba aestuarina ... [more]
UPI001FB0F0112.430e-5675.61replication factor C subunit 2 isoform X2 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 24..123
e-value: 1.0E-5
score: 35.0
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 28..108
e-value: 3.5E-11
score: 43.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..123
e-value: 8.9E-36
score: 125.2
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 2..123
NoneNo IPR availablePANTHERPTHR11669:SF5REPLICATION FACTOR C SUBUNIT 2coord: 2..123
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110393contigM-pyrifera_M_contig110393:50..598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110393.2175.1mRNA_M-pyrifera_M_contig110393.2175.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110393 50..598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110393.2175.1 ID=prot_M-pyrifera_M_contig110393.2175.1|Name=mRNA_M-pyrifera_M_contig110393.2175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
LQLSDVVGNEPVVERLKAIADAGNMNNIILAGPPGTGKTTSIMCLARAML
GPAVLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEA
DSMTSAAQQSLRRTMEIWSSTTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase