mRNA_M-pyrifera_M_contig110369.2171.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110369.2171.1
Unique NamemRNA_M-pyrifera_M_contig110369.2171.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: A0A7X6ARL7_9ACTN (NTP transferase domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ARL7_9ACTN)

HSP 1 Score: 362 bits (930), Expect = 3.850e-124
Identity = 178/199 (89.45%), Postives = 186/199 (93.47%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPMMPLANRPMMEHIV LLKRHGFDEIV TVAF AN IR+WFGDGS+FGVRMVYA EE+PLGTAGSVRNAM+ELTEPFLVISGDVLTDVDL +IVA H  KKA+ATIGLIRV+NPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEP IFDYI  DR VDFSGEVFPALLADGKPL+GAVAEGYWEDVGNL
Sbjct:   23 KPMMPLANRPMMEHIVGLLKRHGFDEIVATVAFRANQIRDWFGDGSDFGVRMVYAVEESPLGTAGSVRNAMEELTEPFLVISGDVLTDVDLGRIVAAHREKKALATIGLIRVENPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPGIFDYIPPDRAVDFSGEVFPALLADGKPLHGAVAEGYWEDVGNL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: A0A3M2GMT7_ACTSX (Mannose-1-phosphate guanyltransferase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GMT7_ACTSX)

HSP 1 Score: 338 bits (868), Expect = 9.800e-110
Identity = 163/199 (81.91%), Postives = 180/199 (90.45%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPMMPL NRPMMEHIV+LL+ HGFD+IVVTVAFMAN IRNWFGDGSEFGVRMVYATEETPLGTAGSVRNA DEL + FLVISGDVLTD+DL+KIVAEH +  A+ TIGL+RVDNPLEFGIVITR+DGS+ERFLEKPGWGQVFSDTIN+GIFVLEPE+FD+I   RPVDFS EVFP+LLA G+ L GAVA+GYW DVG L
Sbjct:   23 KPMMPLVNRPMMEHIVELLREHGFDDIVVTVAFMANVIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNARDELDDTFLVISGDVLTDIDLSKIVAEHRSTGAVGTIGLVRVDNPLEFGIVITREDGSVERFLEKPGWGQVFSDTINTGIFVLEPEVFDHIPEGRPVDFSSEVFPSLLAAGRRLQGAVADGYWADVGTL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: UPI001C625FAD (sugar phosphate nucleotidyltransferase n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C625FAD)

HSP 1 Score: 337 bits (864), Expect = 4.020e-108
Identity = 166/199 (83.42%), Postives = 179/199 (89.95%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPM+PLANRPMMEHIV LL+ HG+ EIVVTVAF+AN IRN+FGDGSEFGV MVYATEE PLGTAGSVRNA D L E FLVISGDVLTD+DL+KIVAEHE K A+ATIGLI VD+PLEFGIVIT +DGSIERFLEKP WGQVFSDTIN+GIFVLEPEIFDYI  DRPVDFSGEVFP LLA+GKP+ GAVAEGYWEDVG L
Sbjct:   23 KPMLPLANRPMMEHIVGLLRDHGYTEIVVTVAFLANQIRNYFGDGSEFGVEMVYATEEQPLGTAGSVRNAKDVLDERFLVISGDVLTDIDLSKIVAEHEEKGALATIGLIAVDDPLEFGIVITHEDGSIERFLEKPTWGQVFSDTINTGIFVLEPEIFDYIAPDRPVDFSGEVFPQLLAEGKPMIGAVAEGYWEDVGTL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: UPI001E2E6264 (sugar phosphate nucleotidyltransferase n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2E6264)

HSP 1 Score: 336 bits (862), Expect = 7.960e-108
Identity = 161/199 (80.90%), Postives = 180/199 (90.45%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KP++PL NRPMMEH++DLLKRHG DEIVVTVAFMAN IR++FGDGS+FGV++ YATEETPLGTAGSVRNAM+ LTE FLVISGDVLTDVDL+ I+  HEA +AMATIGL  VDNPLEFGIVITR+DGSIERFLEKP WGQVFSDTIN+G+FVLEPEIFDYIE DR VDFS EVFP LLA+GKPL+GA+ EGYWEDVG L
Sbjct:   23 KPLLPLVNRPMMEHVIDLLKRHGIDEIVVTVAFMANAIRDYFGDGSDFGVKIAYATEETPLGTAGSVRNAMEHLTERFLVISGDVLTDVDLSAIIDVHEANQAMATIGLAHVDNPLEFGIVITREDGSIERFLEKPTWGQVFSDTINTGMFVLEPEIFDYIEPDRSVDFSSEVFPKLLAEGKPLFGAITEGYWEDVGTL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: A0A7W1TWP3_9ACTN (NTP transferase domain-containing protein n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1TWP3_9ACTN)

HSP 1 Score: 336 bits (862), Expect = 8.310e-108
Identity = 164/199 (82.41%), Postives = 181/199 (90.95%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPMMPLANRPMMEHIV LL+RHGFD+IVVTVAFMAN+IR +FGDGSEFGVRMVYATEE+PLGTAGSVRNAMDEL E FLVISGDVLTD+DL++IVA H+ + A+ATIGL  V+NPLEFGIVIT DDG+IERFLEKP WGQVFSDT+N+GIFVLEPEIFD+I  DRPVDFS EVFPALL  GKPLYG V+EGYWEDVG L
Sbjct:   23 KPMMPLANRPMMEHIVMLLQRHGFDDIVVTVAFMANNIRTYFGDGSEFGVRMVYATEESPLGTAGSVRNAMDELDERFLVISGDVLTDIDLSEIVAFHDQRAALATIGLTAVENPLEFGIVITDDDGAIERFLEKPTWGQVFSDTVNNGIFVLEPEIFDFIPPDRPVDFSAEVFPALLEQGKPLYGHVSEGYWEDVGTL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: A0A6N7FMV8_9ACTN (NTP transferase domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FMV8_9ACTN)

HSP 1 Score: 333 bits (853), Expect = 1.680e-106
Identity = 162/199 (81.41%), Postives = 180/199 (90.45%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPM+PLANRPMMEH+V LL++HGFDEIVVTVA+ AN IR +FGDGSEFG+RMVYATEE+PLGTAGSV NA DEL E FLVISGDVLTD+DL+K+VA HE  KA+ATIGL+R +NPLEFGIVIT+DDGSIERFLEKP WGQVFSDTIN+GIFVLEPEIFD+I A RPVDFSGEVFPALL  GK L+GAVAEGYWEDVG L
Sbjct:   23 KPMIPLANRPMMEHVVGLLRKHGFDEIVVTVAYRANAIRTYFGDGSEFGIRMVYATEESPLGTAGSVLNAKDELDERFLVISGDVLTDIDLSKVVAAHERAKALATIGLVRNENPLEFGIVITKDDGSIERFLEKPTWGQVFSDTINTGIFVLEPEIFDHIPAGRPVDFSGEVFPALLEAGKRLFGAVAEGYWEDVGTL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: A0A7V9GG66_9ACTN (NTP transferase domain-containing protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9GG66_9ACTN)

HSP 1 Score: 330 bits (847), Expect = 2.360e-106
Identity = 159/199 (79.90%), Postives = 178/199 (89.45%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPMMPLANRPMMEHIV+LL+RHG DEIVVT+AFM N IR +FGDG EFGV+MVYATEE PLGTAGSVRNAMD L E FLVISGDVLTD+DL+ ++  HE ++AMATI L+RVD+PLEFGIVIT DDG+IERFLEKP WG+VFSDTIN+G+FVLEPEIFD+I ADRPVDFS EVFPALL  GKP+YGAVAEGYWEDVG L
Sbjct:   23 KPMMPLANRPMMEHIVELLRRHGVDEIVVTLAFMPNAIRTYFGDGREFGVKMVYATEEQPLGTAGSVRNAMDRLNERFLVISGDVLTDIDLSGVMRFHEEREAMATIALVRVDDPLEFGIVITHDDGTIERFLEKPTWGEVFSDTINTGVFVLEPEIFDFIPADRPVDFSSEVFPALLEAGKPMYGAVAEGYWEDVGTL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: A0A7X7HU43_9ACTN (NTP transferase domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HU43_9ACTN)

HSP 1 Score: 329 bits (844), Expect = 3.700e-105
Identity = 160/199 (80.40%), Postives = 177/199 (88.94%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPM+PLANRPMMEHI+DLLKRH  DEIVVTVA++AN IR +FGDGSEFGVRMVYATE+ PLGTAGSVRNAM EL E FLVISGDVLTD+DL +I+  HEA  A+ATIGL+ V+NPLEFGIVITR DGSIERFLEKP WG+VFSDTIN+GIFVLEPEIFDYIE DR VDFS EVFPAL+ADGK ++GAVA GYWEDVG L
Sbjct:   23 KPMLPLANRPMMEHIIDLLKRHDIDEIVVTVAYLANQIRTYFGDGSEFGVRMVYATEDQPLGTAGSVRNAMSELDERFLVISGDVLTDIDLDEIIKVHEANDAVATIGLVSVENPLEFGIVITRPDGSIERFLEKPTWGEVFSDTINTGIFVLEPEIFDYIEPDRSVDFSSEVFPALMADGKRVFGAVATGYWEDVGTL 221          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: UPI001D117645 (sugar phosphate nucleotidyltransferase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D117645)

HSP 1 Score: 328 bits (842), Expect = 6.570e-105
Identity = 156/199 (78.39%), Postives = 178/199 (89.45%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPM+PL NRPMMEHI+DLLKRHG ++IVVTVAFMAN+IRN+FGDGSEFGVRM YA EETPLGTAGSVRNAMDEL + FLVISGDVLTDVDL  ++  H+ + A+ATIGL+RV+NPLE+GIVITRDDG+IERFLEKP WGQVFSDTINSGI+VL+P++FDYI AD PVDFS +VFPALL DG+ L GAV EGYWEDVG L
Sbjct:   18 KPMLPLVNRPMMEHIIDLLKRHGIEDIVVTVAFMANNIRNYFGDGSEFGVRMTYAAEETPLGTAGSVRNAMDELDDTFLVISGDVLTDVDLGAVIQAHQEQGALATIGLVRVENPLEYGIVITRDDGTIERFLEKPTWGQVFSDTINSGIYVLDPKVFDYIAADTPVDFSSDVFPALLDDGEKLIGAVCEGYWEDVGTL 216          
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Match: UPI001AA029C3 (sugar phosphate nucleotidyltransferase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA029C3)

HSP 1 Score: 328 bits (841), Expect = 1.030e-104
Identity = 157/199 (78.89%), Postives = 177/199 (88.94%), Query Frame = 1
Query:    1 KPMMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRMVYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKKAMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFVLEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL 597
            KPM+PL NRPMM H+++LLK HGFD+IVVTVAF+AN IRN+FGDGSEFGVR+ Y TEETPLGTAGSVRNAMD+LT+ FLVISGDVLTD+DL+ IV  HE ++A+ATIGL  V+NPLEFGIVIT  DG+IERFLEKP WGQVFSDTIN+GIFVLEPEIFDYI  DRPVDFS EVFPALL  G+PLYGAVA+GYWEDVG L
Sbjct:   23 KPMLPLVNRPMMVHVIELLKEHGFDDIVVTVAFLANAIRNYFGDGSEFGVRIAYTTEETPLGTAGSVRNAMDQLTDRFLVISGDVLTDIDLSAIVRFHEERQAVATIGLAHVENPLEFGIVITEKDGAIERFLEKPTWGQVFSDTINTGIFVLEPEIFDYIPPDRPVDFSSEVFPALLDKGRPLYGAVADGYWEDVGTL 221          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110369.2171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X6ARL7_9ACTN3.850e-12489.45NTP transferase domain-containing protein (Fragmen... [more]
A0A3M2GMT7_ACTSX9.800e-11081.91Mannose-1-phosphate guanyltransferase (Fragment) n... [more]
UPI001C625FAD4.020e-10883.42sugar phosphate nucleotidyltransferase n=1 Tax=Iam... [more]
UPI001E2E62647.960e-10880.90sugar phosphate nucleotidyltransferase n=1 Tax=Rha... [more]
A0A7W1TWP3_9ACTN8.310e-10882.41NTP transferase domain-containing protein n=3 Tax=... [more]
A0A6N7FMV8_9ACTN1.680e-10681.41NTP transferase domain-containing protein n=1 Tax=... [more]
A0A7V9GG66_9ACTN2.360e-10679.90NTP transferase domain-containing protein (Fragmen... [more]
A0A7X7HU43_9ACTN3.700e-10580.40NTP transferase domain-containing protein n=1 Tax=... [more]
UPI001D1176456.570e-10578.39sugar phosphate nucleotidyltransferase n=1 Tax=Aqu... [more]
UPI001AA029C31.030e-10478.89sugar phosphate nucleotidyltransferase n=1 Tax=Rha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110369contigM-pyrifera_M_contig110369:3..599 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score274.6
Seed ortholog evalue3.5e-71
Seed eggNOG ortholog105422.BBPM01000041_gene639
Preferred namempg
KEGG rclassRC00002,RC00408
KEGG koko:K00344,ko:K00966,ko:K01840,ko:K03431,ko:K15778,ko:K16881
KEGG ReactionR00885,R00959,R01057,R01818,R02060,R08639
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130
KEGG ModuleM00114,M00361,M00362
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Nucleotidyl transferase
EggNOG OGs2GKTE@201174,2NEYQ@228398,COG1109@1,COG1109@2,COG1208@1,COG1208@2
EC1.6.5.5,2.7.7.13,5.4.2.10,5.4.2.2,5.4.2.8
COG Functional cat.GJM
BiGG ReactioniAF987.Gmet_3178
Best tax levelStreptacidiphilus
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size597
Cds size591
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.8873546-UTR-M-pyrifera_M_contig110369:2..81622815614.8873546-UTR-M-pyrifera_M_contig110369:2..8Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig110369 3..8 +
1692277488.3824983-UTR-M-pyrifera_M_contig110369:2..81692277488.3824983-UTR-M-pyrifera_M_contig110369:2..8Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig110369 3..8 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.900001-CDS-M-pyrifera_M_contig110369:8..5991622815614.900001-CDS-M-pyrifera_M_contig110369:8..599Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110369 9..599 +
1692277488.3968701-CDS-M-pyrifera_M_contig110369:8..5991692277488.3968701-CDS-M-pyrifera_M_contig110369:8..599Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110369 9..599 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110369.2171.1prot_M-pyrifera_M_contig110369.2171.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110369 9..599 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110369.2171.1

>prot_M-pyrifera_M_contig110369.2171.1 ID=prot_M-pyrifera_M_contig110369.2171.1|Name=mRNA_M-pyrifera_M_contig110369.2171.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp
MMPLANRPMMEHIVDLLKRHGFDEIVVTVAFMANHIRNWFGDGSEFGVRM
VYATEETPLGTAGSVRNAMDELTEPFLVISGDVLTDVDLTKIVAEHEAKK
AMATIGLIRVDNPLEFGIVITRDDGSIERFLEKPGWGQVFSDTINSGIFV
LEPEIFDYIEADRPVDFSGEVFPALLADGKPLYGAVAEGYWEDVGNL
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mRNA from alignment at M-pyrifera_M_contig110369:3..599+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110369.2171.1 ID=mRNA_M-pyrifera_M_contig110369.2171.1|Name=mRNA_M-pyrifera_M_contig110369.2171.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=597bp|location=Sequence derived from alignment at M-pyrifera_M_contig110369:3..599+ (Macrocystis pyrifera P11B4 male)
AAGCCGATGATGCCGCTGGCCAACCGGCCGATGATGGAGCACATCGTCGA CCTTTTGAAGCGCCACGGGTTCGACGAGATCGTGGTGACGGTCGCCTTCA TGGCGAACCACATCCGCAACTGGTTCGGCGACGGCTCCGAGTTCGGCGTC CGGATGGTCTATGCCACCGAAGAGACCCCGCTCGGCACAGCCGGCTCGGT GCGCAACGCCATGGACGAGCTGACCGAGCCGTTCCTCGTGATCTCCGGCG ACGTCCTCACCGACGTCGACCTCACCAAGATCGTGGCCGAGCACGAGGCC AAGAAGGCGATGGCGACCATCGGCCTCATCCGGGTCGACAACCCGCTCGA GTTCGGCATCGTCATCACCCGCGACGACGGCTCGATCGAGCGGTTCCTCG AGAAGCCGGGCTGGGGACAGGTGTTCAGTGACACCATCAACTCCGGCATC TTCGTGCTCGAACCGGAGATCTTCGACTACATCGAGGCCGATCGCCCGGT CGACTTCTCGGGCGAGGTCTTCCCGGCACTGTTGGCCGATGGCAAACCGC TCTACGGGGCGGTCGCCGAGGGCTACTGGGAAGACGTCGGCAACCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110369:3..599+

>mRNA_M-pyrifera_M_contig110369.2171.1 ID=mRNA_M-pyrifera_M_contig110369.2171.1|Name=mRNA_M-pyrifera_M_contig110369.2171.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig110369:3..599+ (Macrocystis pyrifera P11B4 male)
ATGATGCCGCTGGCCAACCGGCCGATGATGGAGCACATCGTCGACCTTTT
GAAGCGCCACGGGTTCGACGAGATCGTGGTGACGGTCGCCTTCATGGCGA
ACCACATCCGCAACTGGTTCGGCGACGGCTCCGAGTTCGGCGTCCGGATG
GTCTATGCCACCGAAGAGACCCCGCTCGGCACAGCCGGCTCGGTGCGCAA
CGCCATGGACGAGCTGACCGAGCCGTTCCTCGTGATCTCCGGCGACGTCC
TCACCGACGTCGACCTCACCAAGATCGTGGCCGAGCACGAGGCCAAGAAG
GCGATGGCGACCATCGGCCTCATCCGGGTCGACAACCCGCTCGAGTTCGG
CATCGTCATCACCCGCGACGACGGCTCGATCGAGCGGTTCCTCGAGAAGC
CGGGCTGGGGACAGGTGTTCAGTGACACCATCAACTCCGGCATCTTCGTG
CTCGAACCGGAGATCTTCGACTACATCGAGGCCGATCGCCCGGTCGACTT
CTCGGGCGAGGTCTTCCCGGCACTGTTGGCCGATGGCAAACCGCTCTACG
GGGCGGTCGCCGAGGGCTACTGGGAAGACGTCGGCAACCTCATGATGCCG
CTGGCCAACCGGCCGATGATGGAGCACATCGTCGACCTTTTGAAGCGCCA
CGGGTTCGACGAGATCGTGGTGACGGTCGCCTTCATGGCGAACCACATCC
GCAACTGGTTCGGCGACGGCTCCGAGTTCGGCGTCCGGATGGTCTATGCC
ACCGAAGAGACCCCGCTCGGCACAGCCGGCTCGGTGCGCAACGCCATGGA
CGAGCTGACCGAGCCGTTCCTCGTGATCTCCGGCGACGTCCTCACCGACG
TCGACCTCACCAAGATCGTGGCCGAGCACGAGGCCAAGAAGGCGATGGCG
ACCATCGGCCTCATCCGGGTCGACAACCCGCTCGAGTTCGGCATCGTCAT
CACCCGCGACGACGGCTCGATCGAGCGGTTCCTCGAGAAGCCGGGCTGGG
GACAGGTGTTCAGTGACACCATCAACTCCGGCATCTTCGTGCTCGAACCG
GAGATCTTCGACTACATCGAGGCCGATCGCCCGGTCGACTTCTCGGGCGA
GGTCTTCCCGGCACTGTTGGCCGATGGCAAACCGCTCTACGGGGCGGTCG
CCGAGGGCTACTGGGAAGACGTCGGCAACCTC
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