prot_M-pyrifera_M_contig93682.21641.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93682.21641.1
Unique Nameprot_M-pyrifera_M_contig93682.21641.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
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BLAST of mRNA_M-pyrifera_M_contig93682.21641.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.370e-10
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0 
Query:    1 DCNATEVLPLELRQACRAFYVEGDGNCLWRSISHGLWGTDYFWPHVKLV 49
            D  AT +L  ELR+   A +VEGDGNC WRS++  LWGTD +W  +KL 
Sbjct:   87 DPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLA 135
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93682.21641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE4.370e-1053.06SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 4..48
e-value: 4.5E-5
score: 25.0
IPR003323OTU domainPROSITEPS50802OTUcoord: 16..49
score: 9.805
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 17..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93682contigM-pyrifera_M_contig93682:287..433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93682.21641.1mRNA_M-pyrifera_M_contig93682.21641.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93682 287..433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93682.21641.1 ID=prot_M-pyrifera_M_contig93682.21641.1|Name=mRNA_M-pyrifera_M_contig93682.21641.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
DCNATEVLPLELRQACRAFYVEGDGNCLWRSISHGLWGTDYFWPHVKLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
IPR038765Papain-like_cys_pep_sf