prot_M-pyrifera_M_contig110342.2162.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110342.2162.1
Unique Nameprot_M-pyrifera_M_contig110342.2162.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A8J4Q0S1_9MYCE (Arp2/3 complex 34 kDa subunit n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q0S1_9MYCE)

HSP 1 Score: 132 bits (332), Expect = 3.640e-35
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 0
Query:    4 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 145
            D+LA K+  LKR++  APF  +FE + +K A PDI  + YR +E+ Y+KP+GD    +F ++FKDADD V +K+FLQ F DAR++MNN P+V F+ K+ P+EL+   GV     +GFVS VLF    H +   +T +L+Q F
Sbjct:  100 DELAKKVGLLKRNLVAAPFLMVFEGVESKKALPDIITIDYRSDESFYIKPQGDNVIVVFDITFKDADDVVLSKIFLQSFVDARKTMNNTPSVTFSQKDPPLELKGVKGVRTGAHHGFVSFVLFPA--HLKKPQETADLIQTF 239          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: D3BN12_POLPP (Arp2/3 complex 34 kDa subunit n=2 Tax=Acytosteliaceae TaxID=2058183 RepID=D3BN12_POLPP)

HSP 1 Score: 128 bits (321), Expect = 1.520e-33
Identity = 63/145 (43.45%), Postives = 95/145 (65.52%), Query Frame = 0
Query:    1 PFSDKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 145
            P  ++LA K+S LKR++  APF  +F+ I +K A P+I  + YR +E+ Y+K +GD  T IF + FKD+DD V +K+FLQ F D R+++NNVP+V F+ K+ P+EL+   GV     +GFVS+ LF    H +   +T +L+Q F
Sbjct:   95 PNKEELAHKVSQLKRNLMAAPFLMVFDAIESKKATPEIISIDYRSDESFYIKTQGDNVTVIFDIIFKDSDDIVLSKIFLQAFVDVRKTLNNVPSVSFSQKDPPLELKGVRGVRAGVNHGFVSINLFPG--HIKKAQETADLIQTF 237          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: F4PTQ2_CAVFA (Arp2/3 complex 34 kDa subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PTQ2_CAVFA)

HSP 1 Score: 128 bits (321), Expect = 1.580e-33
Identity = 61/142 (42.96%), Postives = 94/142 (66.20%), Query Frame = 0
Query:    4 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 145
            ++LA K++NLKR++  APF  +FE + AK   P+   + YR +E+ Y+KP+GD  T IF + FKDADD + +K+FLQ F D R++M +VP+V F+ K+ P+EL+   GV     +GFVS+ LF   +H +   +T +L+Q F
Sbjct:  100 EQLANKVANLKRNLMAAPFLMVFEAMEAKKPLPETITIDYRTDESFYIKPQGDNVTVIFDIHFKDADDVILSKIFLQAFVDVRKTMTSVPSVTFSQKDPPLELKGVKGVRAGVAHGFVSITLFP--LHLKRAQETADLIQTF 239          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: ARPC2_DICDI (Actin-related protein 2/3 complex subunit 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ARPC2_DICDI)

HSP 1 Score: 128 bits (321), Expect = 1.620e-33
Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 0
Query:    4 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETN-GFVSMVLFEPQMHARNVFKTINLLQNF 145
            ++LA K+S LKRH+  APF  +FE I AK   P+I  ++YR +E  YLKP+GD    IF ++FKDADD + +K+FLQ F D R++++NVP++ F+ K+ P+EL+   GV   + N GFVS VLF    H +   ++ +L+Q F
Sbjct:  100 EELAKKVSLLKRHLVAAPFLMVFEGIEAKKPLPEIIAINYRTDETFYLKPQGDNVIVIFDIAFKDADDVILSKIFLQSFVDVRKTISNVPSITFSQKDPPLELKGVKGVRAGQANHGFVSFVLFPA--HIKKPQESADLIQTF 240          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A2P6NTZ0_9EUKA (Arp2/3 complex 34 kDa subunit n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTZ0_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 1.380e-32
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    4 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSM------------VLFEPQMHARNVFKTINLLQNF 145
            DK+   I+ LKRH   APF K+F  + AK     + +++YR++EAIY+KPE DR   IFS+ FKD DD ++AKVFLQE+ADAR++M+N P+V ++ KE P+EL+    ++  ++ G+VS             VLF P +      KTI+ +Q F
Sbjct:  149 DKVIHDIALLKRHAFAAPFYKVFADVEAKKGGGPLVEINYRDDEAIYIKPESDRAIVIFSIGFKDVDDIIFAKVFLQEYADARKTMSNAPSVTYSQKEPPLELKGVKNLKTGDSQGYVSFGELERGKALTDAVLFAPHVSGTKKEKTIDNIQTF 302          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A7S2EXC4_9EUKA (Arp2/3 complex 34 kDa subunit (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2EXC4_9EUKA)

HSP 1 Score: 114 bits (286), Expect = 6.420e-29
Identity = 65/140 (46.43%), Postives = 84/140 (60.00%), Query Frame = 0
Query:    6 LALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 145
            L  KI  LKR    A F KMF  + A   +P I  ++YR NEA+YL    +   AIFSV+FKD DD V +KVFLQEFA  R+S+NN P+VKF+ +E P+EL+    V   +  GFVS  LF   +   +  KTI+ LQ F
Sbjct:   88 LPRKIGLLKREAFAAAFVKMFGTVTAGGQSPMI-TINYRTNEALYLTQNREGVIAIFSVNFKDRDDVVISKVFLQEFAAGRKSINNAPSVKFSQREAPLELQGVQNVREADDQGFVSFALFSGHISEGHRDKTIDSLQMF 226          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: L8GWZ2_ACACA (Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWZ2_ACACA)

HSP 1 Score: 115 bits (288), Expect = 1.280e-28
Identity = 63/142 (44.37%), Postives = 85/142 (59.86%), Query Frame = 0
Query:    4 DKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 145
            D L  KI+  KR V  AP + +F+    K   P +  ++YR NEA+YLK EG+    IFS++FKD DD V  KVFLQE   AR+++NN PAV F+ +E P+EL+S   V   E  GFV+ +LF P  H     KTI+ +  F
Sbjct:  102 DSLPGKIALFKRTVVAAPLEAVFD---GKPGLPPVITINYRTNEAVYLKREGNNVAVIFSINFKDKDDIVIGKVFLQELEAARKTINNAPAVTFSQRERPLELKSVQNVYEGEDQGFVTFLLFGPHTHESRRGKTIDTIHLF 240          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A152A0Q5_9MYCE (Arp2/3 complex 34 kDa subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A0Q5_9MYCE)

HSP 1 Score: 114 bits (286), Expect = 4.980e-28
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 0
Query:    6 LALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 145
            LA  IS  KR++  APF   F  I AK    DI  V YR  E  Y+K +GD    +F + FKDADD + +K+FLQ F DAR+++NN PA+ F+ K+ P+EL+   GV     +GFVS VLF    H +   +T +L+Q F
Sbjct:  103 LATSISLFKRNLVSAPFLMAFSAIEAKKTI-DIISVDYRSEETFYIKTQGDNVIVVFDIHFKDADDIILSKIFLQSFVDARKTLNNTPAITFSQKDPPLELKGVRGVRTGAAHGFVSFVLFPA--HLKKPQETADLIQTF 239          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: L8HFV1_ACACA (Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HFV1_ACACA)

HSP 1 Score: 113 bits (283), Expect = 7.590e-28
Identity = 61/137 (44.53%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    9 KISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF 145
            K+S LKR++   PF  +     A+    ++  ++YR NEA+Y+KPE D  T IFS++FKD  D V  KVFLQEF D RRSM+  PAV FT +E P+EL    GV      GFVS VLF+  +      K+I+++Q F
Sbjct:  112 KVSLLKRNILAVPFLNV-----AEGKTKNLVVINYRSNEAMYIKPEADSVTVIFSINFKDQGDIVLGKVFLQEFQDCRRSMSGAPAVSFTQRERPLELRDVQGVYEGADQGFVSFVLFKNHLDPVRREKSIDMIQMF 243          
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Match: A0A177UST4_9BASI (Arp2/3 complex 34 kDa subunit n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UST4_9BASI)

HSP 1 Score: 102 bits (254), Expect = 1.790e-23
Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 0
Query:    1 PFSDKLALKISNLKRHVGGAPFKKMFE-------------QILAKNAAPDIWKVSYRENEAIYLKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYKELPMELESYPGVEGVETNGFVSMVLFEPQMHARN---VFKTINLLQNF 145
            P  D L   +S LKR+   APF++ F              Q    +A  +   + YRE+EAIY+ P GDR T +FS  FK+  D V+ +VFLQEF DARR   N P V ++ +E P+E+ S  G++  E  G+V+ VLF    H +N    F TI+ +Q F
Sbjct:  100 PERDTLIHSLSLLKRNAMAAPFERAFTIQKELEAEAEAAGQAPPSHATTEPMAIHYREDEAIYILPLGDRVTVVFSTEFKEETDKVFGRVFLQEFVDARRRHQNAPQVLYSNREPPLEIRSVQGLKSHEAVGYVTFVLFP--RHFQNPDHAFSTISRIQLF 258          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110342.2162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4Q0S1_9MYCE3.640e-3545.77Arp2/3 complex 34 kDa subunit n=1 Tax=Polysphondyl... [more]
D3BN12_POLPP1.520e-3343.45Arp2/3 complex 34 kDa subunit n=2 Tax=Acytosteliac... [more]
F4PTQ2_CAVFA1.580e-3342.96Arp2/3 complex 34 kDa subunit n=1 Tax=Cavenderia f... [more]
ARPC2_DICDI1.620e-3344.76Actin-related protein 2/3 complex subunit 2 n=1 Ta... [more]
A0A2P6NTZ0_9EUKA1.380e-3242.21Arp2/3 complex 34 kDa subunit n=1 Tax=Planoprotost... [more]
A0A7S2EXC4_9EUKA6.420e-2946.43Arp2/3 complex 34 kDa subunit (Fragment) n=1 Tax=S... [more]
L8GWZ2_ACACA1.280e-2844.37Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba... [more]
A0A152A0Q5_9MYCE4.980e-2843.57Arp2/3 complex 34 kDa subunit n=1 Tax=Tieghemostel... [more]
L8HFV1_ACACA7.590e-2844.53Arp2/3 complex 34 kDa subunit n=1 Tax=Acanthamoeba... [more]
A0A177UST4_9BASI1.790e-2338.51Arp2/3 complex 34 kDa subunit n=2 Tax=Tilletia Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 21..145
e-value: 2.3E-33
score: 117.1
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 21..145
IPR007188Actin-related protein 2/3 complex subunit 2PFAMPF04045P34-Arccoord: 4..145
e-value: 8.1E-39
score: 133.8
IPR007188Actin-related protein 2/3 complex subunit 2PANTHERPTHR12058ARP2/3 COMPLEX 34 KDA SUBUNITcoord: 4..145
NoneNo IPR availablePANTHERPTHR12058:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2coord: 4..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110342contigM-pyrifera_M_contig110342:2..436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110342.2162.1mRNA_M-pyrifera_M_contig110342.2162.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110342 2..436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110342.2162.1 ID=prot_M-pyrifera_M_contig110342.2162.1|Name=mRNA_M-pyrifera_M_contig110342.2162.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
PFSDKLALKISNLKRHVGGAPFKKMFEQILAKNAAPDIWKVSYRENEAIY
LKPEGDRCTAIFSVSFKDADDAVYAKVFLQEFADARRSMNNVPAVKFTYK
ELPMELESYPGVEGVETNGFVSMVLFEPQMHARNVFKTINLLQNF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034666ARPC2/4
IPR007188ARPC2