prot_M-pyrifera_M_contig93554.21610.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93554.21610.1
Unique Nameprot_M-pyrifera_M_contig93554.21610.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length89
Homology
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BLAST of mRNA_M-pyrifera_M_contig93554.21610.1 vs. uniprot
Match: A0A521W752_9GAMM (RHS repeat-associated core domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521W752_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 5.030e-7
Identity = 34/92 (36.96%), Postives = 48/92 (52.17%), Query Frame = 0 
Query:    9 GLVAVGQPWLP--KPFVTPGSNPGTSIASEFFRKVFGGKQLP------------GKYFKIMGSPTYAGAAGRLTPVLGWLLLSYEGTKLIAC 86
            G VA GQP +P  KPFVTPGS+ GTS+A     ++F   + P            G+   I G+ + A  A R  PV+GW +L+Y+   +  C
Sbjct:  186 GAVAAGQP-IPGTKPFVTPGSSRGTSLAGMVADEIFDDMKFPVRVPTIVGGPGTGRPLAIAGTRSVARFAARAVPVVGWAVLAYDAVSIGVC 276
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93554.21610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A521W752_9GAMM5.030e-736.96RHS repeat-associated core domain-containing prote... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93554contigM-pyrifera_M_contig93554:356..622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93554.21610.1mRNA_M-pyrifera_M_contig93554.21610.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93554 356..622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93554.21610.1 ID=prot_M-pyrifera_M_contig93554.21610.1|Name=mRNA_M-pyrifera_M_contig93554.21610.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
YGFLLGGGGLVAVGQPWLPKPFVTPGSNPGTSIASEFFRKVFGGKQLPGK
YFKIMGSPTYAGAAGRLTPVLGWLLLSYEGTKLIACVDD
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