prot_M-pyrifera_M_contig93542.21606.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig93542.21606.1
Unique Nameprot_M-pyrifera_M_contig93542.21606.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length221
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig93542.21606.1 vs. uniprot
Match: UPI001C9BD851 (myb-binding protein 1A n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BD851)

HSP 1 Score: 60.5 bits (145), Expect = 4.930e-7
Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 0 
Query:   60 LQLGMLLLSEPEDDEIVQASEDVLECASRLSKTKKKKGAQEGDEGEEDP---FMVLVDVMMSLLSRSSAWTKNMVSRAFQGICGELTAEHLAPVFGIIAQAGNEDP 162
            L +G+ L SEPE    + A +++  C+ RL+K K KKG + G+E  ED      V+VD+++SLLSR+S   ++MV   F  IC   TA  +  +  ++    ++ P
Sbjct:  575 LHMGLQLFSEPE--MAISAIKEIHSCSERLNKYKPKKGKKNGNENIEDEPEWVEVIVDLLLSLLSRNSHLLRSMVHCVFPHICAVSTAASIHQILSVLDPKNDKSP 678
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig93542.21606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001C9BD8514.930e-734.91myb-binding protein 1A n=1 Tax=Venturia canescens ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007015DNA polymerase V/Myb-binding protein 1APFAMPF04931DNA_pol_phicoord: 3..208
e-value: 6.7E-30
score: 103.9
IPR007015DNA polymerase V/Myb-binding protein 1APANTHERPTHR13213MYB-BINDING PROTEIN 1A FAMILY MEMBERcoord: 2..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig93542contigM-pyrifera_M_contig93542:9..671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig93542.21606.1mRNA_M-pyrifera_M_contig93542.21606.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig93542 3..671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig93542.21606.1 ID=prot_M-pyrifera_M_contig93542.21606.1|Name=mRNA_M-pyrifera_M_contig93542.21606.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
MWVKVATEHYSELAQRFQRVVAISEVQKKLFKKAMAAASSLCPEKSSSIV
TLRALEYLLLQLGMLLLSEPEDDEIVQASEDVLECASRLSKTKKKKGAQE
GDEGEEDPFMVLVDVMMSLLSRSSAWTKNMVSRAFQGICGELTAEHLAPV
FGIIAQAGNEDPDADLSDAEDGDGDDESDESEDDDEEDSDEEMAEVEEES
ESEGSEEKVPEGELDNDINLD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007015DNA_pol_V/MYBBP1A