mRNA_M-pyrifera_M_contig110332.2159.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A3D5DEG6_9GAMM (ATP-grasp domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DEG6_9GAMM) HSP 1 Score: 129 bits (325), Expect = 1.230e-32 Identity = 79/196 (40.31%), Postives = 104/196 (53.06%), Query Frame = 1
Query: 7 SVAFVARPAGVSVLGMCAALPGVGPDGAAAYHYAGAVTIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLLADPGDVFTAHMNESE---TAIRTYGDVRASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAYVARAGNVPATRHVLQERPASLGRLFAGETP 585
S AF+ V +LG+C AL + P Y ++GA+ +P F E+ ++ + D F+LRGLCGIDFI G ++LIE+N RP ATF LLA P VF AH+ ++ VRA VC A+R V+ L+ P W TDRP+ T + GMPVCS A A V TR L+ R A L E P
Sbjct: 178 SAAFIVSSGSVLLLGVCEAL-NLQPHPELPYRFSGAIAVPQWFYRLRIELTKMVEKLHDAFTLRGLCGIDFIIDGDGNISLIELNARPPATFGLLAQPEHVFEAHLKADSLVHASLPAVAQVRAMAVCYAERPILVTKTLNWPHWVTDRPRIRTCLLPGMPVCSISAA-AATVADTRRKLENRVAELRDRLNNELP 371
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A661CA50_9GAMM (ATP-grasp domain-containing protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CA50_9GAMM) HSP 1 Score: 97.8 bits (242), Expect = 1.240e-20 Identity = 61/153 (39.87%), Postives = 81/153 (52.94%), Query Frame = 1
Query: 148 DEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLLADPGDVFTAHMNE-----SETAIRTYGDVRASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAYVARAGNVPATRHVLQERPASLGRLFAGETPAA 591
D +RRI A F L+GLCG+DFI E G +++E+NPRP ATF+L G +F H+ +E + G RA G+ A +S T+ LD P W TDRPQAG +I G PVC+ + A V + L+ R A L F AA
Sbjct: 238 DAIRRIVAL----FKLKGLCGLDFIVEESGKYSILEVNPRPTATFELYETQGSLFVQHLAAFQGKITEPELDQTGS-RALGLLYAGKSITIPR-LDWPEWVTDRPQAGKQIAIGEPVCTVH-AEGLAVEDVKQQLKTRLADLRESFGFTVEAA 383
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A849MGE1_9PROT (ATP-grasp domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MGE1_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 1.330e-16 Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = 1
Query: 103 YAGAVTIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLLADPGDVFTAHMNESETAIRTYGD------VRASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAY 495
Y GAV++ + V+ I + L GLCGID+I E G + ++E+NPRP ATF+L +F AH+ + Y RA + AK + +SD ++ W DRPQAG RI PVC+ +
Sbjct: 208 YQGAVSLSQKSVGQKEIVKNIVNTIVKETGLMGLCGIDYIVNESGKVVVLEVNPRPPATFELHETQRSLFAAHIACFTGNLIDYNQDRNKLLYRAYAILYAKENCFISDKVEWSDWVKDRPQAGKRIPIKFPVCTVH 344
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A5C4LNV3_9HYPH (ATP-grasp domain-containing protein n=1 Tax=Methylobacterium terricola TaxID=2583531 RepID=A0A5C4LNV3_9HYPH) HSP 1 Score: 86.3 bits (212), Expect = 2.170e-16 Identity = 64/189 (33.86%), Postives = 87/189 (46.03%), Query Frame = 1
Query: 34 GVSVLGMCAALPGVGPDGAAAYHYAGAV---TIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLL-ADPGDVFTAHMNESETAIRTYGDV----RASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAYVARAGNVPATRHVLQERPASLGRLFAG 576
GV+VL + GPD + YAGA T+PD D R A + L GL D + EG L+EINPRP AT D+L P +F AH+ + + + + AS + A + LD P W DRP AG+R+ AG PVC+ +A G+ A R + R A L + G
Sbjct: 188 GVAVLAVTEQWTAPGPD--RPFRYAGAAGPATLPDCVR---DAAERALAGLVAATGLSGLVSADLLV-EGDRWWLLEINPRPGATLDVLDRGPAPLFAAHLAAARGRLPEHRPILPAAAASEILYADAAMAAVPALDWPDWAMDRPSAGSRVAAGAPVCTV-IAEGGDAAAARRAVAARGAELRMMLDG 369
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A1G0JNL3_9GAMM (ATP-grasp domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JNL3_9GAMM) HSP 1 Score: 85.9 bits (211), Expect = 2.460e-16 Identity = 56/169 (33.14%), Postives = 79/169 (46.75%), Query Frame = 1
Query: 97 YHYAGAVTIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLLADPGDVFTAHMNESETAIRTYGDVR----ASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAYVARAGNVPATRHVLQERPASLGRLFAGETPAA 591
Y Y GAVT+P+ + E+ I + L+GLCG+D I E ++EINPRP ATF+L +F AH+ + + D A V A F + + + P W TDRP +G I PVC A A N+ H+L+ R L +L + AA
Sbjct: 206 YRYLGAVTLPEIGTQLSAELGEITHTLVQALKLKGLCGMDLIVDENDQCHILEINPRPTATFELHERANSLFEAHILACQGRLEFSPDTGKIYFAHKVIYAAEDFILPEFV-WPLWATDRPVSGRVIRKDNPVCMIQ-AHAENIHCIHHLLENRTQVLRQLLPMQKLAA 372
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A1I7JVB3_9HYPH (Predicted ATP-dependent carboligase, ATP-grasp superfamily n=2 Tax=Methylobacterium sp. 174MFSha1.1 TaxID=1502749 RepID=A0A1I7JVB3_9HYPH) HSP 1 Score: 85.1 bits (209), Expect = 6.290e-16 Identity = 62/171 (36.26%), Postives = 82/171 (47.95%), Query Frame = 1
Query: 97 YHYAGAVTIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLLADPGDV--FTAHMNESETAIRTYG----DVRASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAYVARAGNVPATRHVLQERPASLGRLFAGETPAA 591
+ YAGA A + +R AA+ LRGL D + +G L+EINPRP AT D+L D G V F AH+ + + Y A+ + A R LD P+W DRP AG+RI AG PVC+ +A + A R + R A+L L G T AA
Sbjct: 234 FRYAGAAGPAPLPATVREAAQRALAALVAATGLRGLVSADLLV-DGEAWWLLEINPRPGATLDVL-DRGKVPLFEAHLAAARGRLPEYRLALPGAAATEILYADREIPAVPALDWPAWTMDRPPAGSRIPAGAPVCTV-LAEGADAAAARRAVAARAAALRALIEGTTGAA 401
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A2D7S5R8_9GAMM (ATP-grasp domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2D7S5R8_9GAMM) HSP 1 Score: 84.3 bits (207), Expect = 1.010e-15 Identity = 49/145 (33.79%), Postives = 70/145 (48.28%), Query Frame = 1
Query: 103 YAGAVTIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLLADPGDVFTAHMNESETAIRTY-----GDVRASGVCVAKRSFTVSDGLDLPSWCTDRP---------QAGTRITAGMPVCSAY 495
Y GAVT+ ++DE+ RI VT L GLCGIDFI + G + +I+INPRP ATF+L D G +F H++ + + Y ++ + AK+ P W +D P + I AG PVC+ Y
Sbjct: 220 YEGAVTVNLQDKKFSDEIYRIITEVTKLSKLSGLCGIDFIINKSGIIYIIDINPRPPATFELYEDEGHLFQNHLDCFQGRLPEYIPHNLNKLKGHAIYYAKKDIIAHSLPSFPDWVSDIPAPKKSKNNLEMKYEILAGNPVCTIY 364
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A0C6FD04_9HYPH (ATP-grasp domain-containing protein n=5 Tax=Methylobacterium TaxID=407 RepID=A0A0C6FD04_9HYPH) HSP 1 Score: 82.8 bits (203), Expect = 3.770e-15 Identity = 71/212 (33.49%), Postives = 98/212 (46.23%), Query Frame = 1
Query: 1 PVSVAFVARPAGVSVLGMCAALPGVGPDGAAAYHYAGA---VTIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLLADPGDV--FTAHMNESE----TAIRTYGDVRASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAYVARAGNVPATRHVL-----------QERPASLGRLFAG 576
P ++A +A G++VLG G D + YAGA VT+PD+ A+ R A + LRGL D + +G L+E+NPRP AT DLL D G V AH+ S A+ A+ + A+ LD P W DRP AG+R+ AG P+C+ +A + A RH L ++RPA FAG
Sbjct: 182 PHALAALADGRGLAVLGATEQWTAPGTD--RPFRYAGAAGPVTLPDSVRAAAE---RALAGLVAATGLRGLVSADLLV-DGAAWWLLEVNPRPGATLDLL-DRGSVPLLAAHIAASRGRLPEALPIPAGAAAAEILYAEADIPAVPALDWPGWTMDRPAAGSRVAAGAPICTV-MAEGADAAAARHALAVRSAALRARLEKRPADAALAFAG 385
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: A0A8H8WXD1_9HYPH (ATP-grasp domain-containing protein n=3 Tax=Methylobacterium indicum TaxID=1775910 RepID=A0A8H8WXD1_9HYPH) HSP 1 Score: 82.4 bits (202), Expect = 5.160e-15 Identity = 61/167 (36.53%), Postives = 79/167 (47.31%), Query Frame = 1
Query: 97 YHYAGAV---TIPDTFAHYADEVRRIAAAVTDYFSLRGLCGIDFIAGEGGTLTLIEINPRPVATFDLL-ADPGDVFTAHMNESE----TAIRTYGDVRASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCSAYVARAGNVPATRHVLQERPASLGRLFA 573
+ YAGAV +PD E A T LRGL D + EG L+E+NPRP AT DLL P +F AH+ S A+ GD A+ + A + LD P W DRP AG+RI AG P+C+ +A + A R L+ R A+L A
Sbjct: 207 FRYAGAVGPVALPDGVRAAVVEALAGLVAAT---GLRGLVSADVLV-EGEAWWLLEVNPRPGATLDLLDRGPVPLFAAHLAASRGRLPQALPVPGDAAATEILYADAAIPAVPALDWPDWAMDRPAAGSRIEAGAPICTV-MAEGADAIAARRALEARAAALRAQLA 368
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Match: UPI00190810B3 (ATP-grasp domain-containing protein n=2 Tax=Azospirillum sp. YIM B02556 TaxID=2800326 RepID=UPI00190810B3) HSP 1 Score: 81.6 bits (200), Expect = 9.590e-15 Identity = 65/177 (36.72%), Postives = 89/177 (50.28%), Query Frame = 1
Query: 1 PVSVAFVARPAG-VSVLGMCAALPGVGPDGAAAYHYAGAV---TIPDTFA-HYADEVRRIAAAVTDYFSLRGLCGIDFIAG---EGGTLTLIEINPRPVATFDLLAD--PGDVFTAHMNESETAIRTYGDVR----ASGVCVAKRSFTVSDGLDLPSWCTDRPQAGTRITAGMPVCS 489
P SVAF+A +G ++ + PD A Y Y GAV +P + A A+ RRIAA F L GL +D + +G ++T++E+NPRP AT DLL PG V AH++ S + G R A V + TV G P WC D P+AG+ + AG P+CS
Sbjct: 181 PASVAFIADRSGRCELVAVSRQWADSAPD--APYRYGGAVLPVAVPLSLADRLAEAARRIAAE----FGLVGLNSLDLLVDGGMDGPSVTVLEVNPRPGATLDLLERHRPGGVMRAHLDASSGRDWSLGAPRPGVIAGAVAYVTAAMTVPVGFAWPPWCADLPRAGSVVEAGQPLCS 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110332.2159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110332.2159.1 >prot_M-pyrifera_M_contig110332.2159.1 ID=prot_M-pyrifera_M_contig110332.2159.1|Name=mRNA_M-pyrifera_M_contig110332.2159.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp PVSVAFVARPAGVSVLGMCAALPGVGPDGAAAYHYAGAVTIPDTFAHYADback to top mRNA from alignment at M-pyrifera_M_contig110332:6..596+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110332.2159.1 ID=mRNA_M-pyrifera_M_contig110332.2159.1|Name=mRNA_M-pyrifera_M_contig110332.2159.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig110332:6..596+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110332:6..596+ >mRNA_M-pyrifera_M_contig110332.2159.1 ID=mRNA_M-pyrifera_M_contig110332.2159.1|Name=mRNA_M-pyrifera_M_contig110332.2159.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig110332:6..596+ (Macrocystis pyrifera P11B4 male)back to top |