prot_M-pyrifera_M_contig110262.2153.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110262.2153.1
Unique Nameprot_M-pyrifera_M_contig110262.2153.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length131
Homology
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BLAST of mRNA_M-pyrifera_M_contig110262.2153.1 vs. uniprot
Match: A0A517PQF6_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PQF6_9PLAN)

HSP 1 Score: 251 bits (642), Expect = 1.640e-84
Identity = 124/130 (95.38%), Postives = 126/130 (96.92%), Query Frame = 0 
Query:    1 MQTLIIINLLLCSAGPGHLRNDEPPASLFVPVPHVMRLPTGELEGLTFEMIPGIDDLQDLPNNPWDADWEEIDPDQIYEVIKDLENVEPQVIIPGQMSIIPFAPIPMRIDPAEFRLIELELEPPISNREP 130
            MQTLIIINLLLCSAGPGHLRN+EPPASLFVPVPHVM LPTGELEGLTFEMIPGIDDLQDLPNNPWDADWEEIDPDQIYEVIKDLENVEPQVIIPGQM IIPFAPIPMRIDPAEFRLIELELEPP S+ EP
Sbjct:    1 MQTLIIINLLLCSAGPGHLRNEEPPASLFVPVPHVMPLPTGELEGLTFEMIPGIDDLQDLPNNPWDADWEEIDPDQIYEVIKDLENVEPQVIIPGQMPIIPFAPIPMRIDPAEFRLIELELEPPRSSFEP 130
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BLAST of mRNA_M-pyrifera_M_contig110262.2153.1 vs. uniprot
Match: A0A6I6AJM2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AJM2_9PLAN)

HSP 1 Score: 224 bits (570), Expect = 1.560e-73
Identity = 107/130 (82.31%), Postives = 120/130 (92.31%), Query Frame = 0 
Query:    1 MQTLIIINLLLCSAGPGHLRNDEPPASLFVPVPHVMRLPTGELEGLTFEMIPGIDDLQDLPNNPWDADWEEIDPDQIYEVIKDLENVEPQVIIPGQMSIIPFAPIPMRIDPAEFRLIELELEPPISNREP 130
            MQT+IIINLLLCSAGPGHLRND+PPASLFVPVPHVM LPTGEL GLTF+MIP I D+QDLPN+PWDADWEE+DPDQ+YEVIKDLENVEPQ+II GQ+ +I   P+P++IDPAEFRLIELELEPPISN EP
Sbjct:    1 MQTIIIINLLLCSAGPGHLRNDDPPASLFVPVPHVMPLPTGELAGLTFDMIPDIFDMQDLPNDPWDADWEELDPDQLYEVIKDLENVEPQIIIRGQVPMIFINPVPIQIDPAEFRLIELELEPPISNSEP 130
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BLAST of mRNA_M-pyrifera_M_contig110262.2153.1 vs. uniprot
Match: A0A2E7KG10_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KG10_9PLAN)

HSP 1 Score: 213 bits (541), Expect = 4.130e-69
Identity = 102/130 (78.46%), Postives = 116/130 (89.23%), Query Frame = 0 
Query:    1 MQTLIIINLLLCSAGPGHLRNDEPPASLFVPVPHVMRLPTGELEGLTFEMIPGIDDLQDLPNNPWDADWEEIDPDQIYEVIKDLENVEPQVIIPGQMSIIPFAPIPMRIDPAEFRLIELELEPPISNREP 130
            MQTLIIINLLLCSAGPGH+RND+PP S+ VPVPHVM LP GE  GLTF+MIP I DLQ+LPN+PWDADWEEIDPDQ++EVIKDLENVEPQ+IIPGQ+ +    P+P++IDPAEFRLIELELEPPISN EP
Sbjct:    1 MQTLIIINLLLCSAGPGHVRNDDPPTSVVVPVPHVMPLPMGEPAGLTFDMIPDIVDLQELPNDPWDADWEEIDPDQLFEVIKDLENVEPQIIIPGQLPMNFINPVPIQIDPAEFRLIELELEPPISNSEP 130
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BLAST of mRNA_M-pyrifera_M_contig110262.2153.1 vs. uniprot
Match: UPI00119E2ABD (hypothetical protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00119E2ABD)

HSP 1 Score: 159 bits (401), Expect = 2.940e-48
Identity = 78/95 (82.11%), Postives = 85/95 (89.47%), Query Frame = 0 
Query:   36 MRLPTGELEGLTFEMIPGIDDLQDLPNNPWDADWEEIDPDQIYEVIKDLENVEPQVIIPGQMSIIPFAPIPMRIDPAEFRLIELELEPPISNREP 130
            M LP GE  GLTF+MIP I DLQ+LPN+PWDADWEEIDPDQ++EVIKDLENVEPQ+IIPGQMSII F PIPMR+DPAEFRLIELELEPPISN  P
Sbjct:    1 MPLPMGEPAGLTFDMIPDILDLQELPNDPWDADWEEIDPDQMFEVIKDLENVEPQIIIPGQMSIILFDPIPMRVDPAEFRLIELELEPPISNSGP 95
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110262.2153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A517PQF6_9PLAN1.640e-8495.38Uncharacterized protein n=1 Tax=Gimesia chilikensi... [more]
A0A6I6AJM2_9PLAN1.560e-7382.31Uncharacterized protein n=1 Tax=Gimesia benthica T... [more]
A0A2E7KG10_9PLAN4.130e-6978.46Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
UPI00119E2ABD2.940e-4882.11hypothetical protein n=1 Tax=Gimesia chilikensis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..130
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110262contigM-pyrifera_M_contig110262:29..421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110262.2153.1mRNA_M-pyrifera_M_contig110262.2153.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110262 29..421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110262.2153.1 ID=prot_M-pyrifera_M_contig110262.2153.1|Name=mRNA_M-pyrifera_M_contig110262.2153.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp
MQTLIIINLLLCSAGPGHLRNDEPPASLFVPVPHVMRLPTGELEGLTFEM
IPGIDDLQDLPNNPWDADWEEIDPDQIYEVIKDLENVEPQVIIPGQMSII
PFAPIPMRIDPAEFRLIELELEPPISNREP*
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